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188 protocols using arachidonic acid

1

ADP-Induced Platelet Aggregation Assessment

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We assessed ADP‐induced platelet aggregation by light transmittance aggregometry (PAP‐8E platelet aggregation profiler, Bio/Data Corporation, Horsham, PA, USA) at baseline and after 7 days of intervention. Citrate‐anticoagulated blood (0.32%) was centrifuged (Rotina 420R, Hettich Lab Technology, Tuttlingen, Germany) for 15 min at 180 g to obtain platelet‐rich plasma. Platelet‐poor plasma was prepared by 10 min centrifugation at 1550 g. Experiments were performed at 37°C under stirring conditions. Thrombin receptor‐activated peptide (TRAP; final concentration 15 μmol l−1, Bachem, Bubendorf, Switzerland) was used to induce maximum platelet aggregation (100%). ADP and arachidonic acid were used to initiate the platelet aggregation in the test, final concentrations of ADP (0.1, 0.2, 0.5, 1.0, 2.0 μmol l−1, Sigma‐Aldrich, St. Louis, MO, USA); arachidonic acid (2 mmol l−1, Sigma‐Aldrich, St. Louis, MO, USA). Aggregations were performed with and without the addition of phosphocreatine (CrP 5 mmol l−1 final concentration; Sigma‐Aldrich, St. Louis, MO, USA).
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2

Metabolic Effects of Palmitate and Arachidonic Acid in ob/ob Mice

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Palmitate and arachidonic acid were purchased from Sigma-Aldrich (St. Louis, MO, USA) and Nu-chek Prep, Inc. (Elysian, MN, USA), respectively. Palmitate- and arachidonic acid-bovine serum albumin (BSA) solutions were prepared by dissolving Palmitate in ethanol and then mixing it with fatty acid-free BSA (2% wt/vol in water; Sigma-Aldrich) at 37 °C on a shaker for 2 h. We obtained 7-week-old male ob/ob mice and age-matched lean mice (C57BL/6J) from the Animal Center of SLC, Inc. (Hamamatsu, Shizuoka, Japan). The mice were housed in individual cages at 22 ± 2 °C with a 12-h light-dark cycle. After overnight fasting, the liver was removed from each mouse and used for western blot analysis. All animal experiments were approved by the institutional animal care and use committee of the Korea Center for Disease Control and Prevention (KCDC-015-11-2A). The methods were carried out in accordance with the approved guidelines.
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3

Lipid Membrane Reconstitution Protocol

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The 1,2-dioleoyl-sn-glycero-3-phosphocholine(DOPC), 1,2-dioleoyl-sn-glycero-3-phosphoetha-nolamine (DOPE), cardiolipin (CL) from bovine heart, arachidonic acid (AA), Triton X-114 octylpolyoxyethylene, dithiothreitol (DTT), bovine serum albumin (BSA), adenosine and guanosine triphosphate (ATP and GTP), sodium sulfate (Na2SO4), diammonium hydrogen phosphate ((NH4)2HPO4), 2-(N-morpholino)ethanesulfonic acid (MES), 2-Amino-2-(hydroxymethyl)propane-1,3-diol (Tris), ethylene glycol-bis(β-aminoethyl ether)-N,N,N′,N′-tetraacetic acid (EGTA), hexane, hexadecane and sodium dodecyl sulfate (SDS) were obtained from Sigma-Aldrich (Munich, Germany). Chloroform was from Merck KGaA (Darmstadt, Germany).
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4

Lipid Standards for Analytical Chemistry

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Lipid standards including phosphatidylcholine (PC) 16:0/18:1 (9Z), PC 18:1 (9Z)/16:0, PC 18:1 (9Z)/18:1 (9Z), PC 18:1 (6Z)/18:1 (6Z), phosphatidylethanolamine (PE) 18:1 (9Z)/18:1 (9Z), lysophosphatidylethanolamine (LPE) 18:1 (9Z), phosphatidylglycerol (PG) 18:0/18:1 (9Z), phosphatidic acid (PA) 16:0/18:1 (9Z), phosphatidylserine (PS) 16:0/18:1 (9Z) and ceramide (Cer) d18:1/16:0 were purchased from Avanti Polar Lipids (AL, USA). Fatty acids including FA 18:1 (9Z), FA 18:1 (9E), FA 18:1 (6Z), FA 18:1 (11Z), FA 20:1 (11Z), FA 20:1 (11E), FA 18:2 (9Z, 12Z) and arachidonic acid FA 18:4 (5Z, 8Z, 11Z, 14Z), and triacylglycerol (TG) 18:1 (9Z)/18:1 (9Z)/18:1 (9Z) were purchased from Sigma-Aldrich. Other solvents were purchased from Innochem (Beijing, China) and meet or exceed the analytical grade standard. The structures of all pure lipids are shown in Fig. S1 and S2. Anthraquinone was purchased from Rhawn (Shanghai, China).
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5

Reconstitution of Mitochondrial Complexes

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KCl, Na2SO4, 2-(N-morpholino)ethanesulfonic acid (MES), tris(hydroxymethyl)aminomethane (Tris), EGTA, hexane, hexadecane, cytochrome c (Cyt c), decylubiquinone, KCN, sucrose, 3-(N-morpholino)propanesulfonic acid (MOPS), bovine serum albumin (BSA), arachidonic acid (AA), genipin, geniposide, adenine triphosphate (ATP), ammonium phosphate (monobasic, NH4H2PO4), dimethyl sulfoxide (DMSO), sulfo-NHS-acetate (NHS), methyl-4-nitrobenzenesulfonate (MNBS), N-ethylmaleimide (NEM), and diammonium salt of malic acid were purchased from Sigma-Aldrich (Munich, Germany). EDTA, KH2PO4, NaN3, and acetonitrile were purchased from Merck (Darmstadt, Germany). Diphytanoylphosphatidylcholine, 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (DOPE), and cardiolipin (CL) came from Avanti Polar Lipids (Alabaster, AL). Chloroform was obtained from Carl Roth (Karlsruhe, Germany).
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6

Platelet aggregation and secretion assay

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Platelet-rich plasma was preincubated with the COX inhibitor aspirin (30 μM;
Sigma-Aldrich), the cPLA2 inhibitor pyrrophenone (40 μM; Cayman
Chemical, Cambridge Bioscience), or vehicle for 30 min at 37°C. Aggregation
and ATP secretion responses to collagen (0.3–3 μg/ml), ADP (5
μM; Chrono-log; Labmedics, Abingdon, United Kingdom), U46619 (10 μM;
Enzo Life Sciences, Exeter, United Kingdom), or arachidonic acid (1 mM;
Sigma-Aldrich) were measured using a Chrono-log 560CA Lumi-Aggregometer (Chrono-log
Corp., Havertown, PA, USA).
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7

Fatty Acids and Cell Viability Assay

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α-Linolenic acid (ALA), docosahexaenoic acid (DHA), eicosapentaenoic acid (EPA), linoleic acid (LA), arachidonic acid (AA), γ-linolenic acid (GLA), 3-(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide (MTT), and 5-FU were purchased from Sigma (St. Louis, MO, USA). The human gastric cell lines MGC and SGC were kindly provided by Prof. P. Wensheng (Zhejiang University, China). RPMI medium 1640 was obtained from GIBCO (Grand Island, NY, USA). All other chemicals were of extra-pure grade or analytical grade.
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8

Optimized Cell Culture Media Formulations

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Tryptic soy broth (TSB), Luria broth (LB), D-glucose, phosphate-buffered saline (PBS), Dulbecco’s PBS (DPBS), Keratinocyte-SFM medium, DMEM (high glucose, GlutaMAX™ Supplement, pyruvate), and Ham’s F-12 Nutrient Mix were purchased from ThermoFisher Scientific (Waltham, MA). DermaLife K Keratinocyte Complete Medium with LifeFactors was obtained from Lifeline Cell Technology (Oceanside, CA). CnT-Prime 3D Barrier Medium was purchased from CELLnTEC Advanced Cell Systems AG (Zurich, Switzerland). Gentamicin, lysostaphin trimethoprim, sucrose, glycerol, mupirocin, neutral-buffered formalin solution (10%), and various supplements for skin culture media including hydrocortisone, isoproterenol, bovine insulin, selenious acid, L-serine, L-carnitine, bovine serum albumin (BSA), palmitic acid, linoleic acid, and arachidonic acid were obtained from Sigma-Aldrich (St. Louis, MI).
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9

Mung Bean Lipoxygenase Purification

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The mung bean seeds were obtained from Sri Venkateswara Agricultural University, Tirupati. Soybean LOX, ETYA, Linoleic acid, Linolenic acid, Arachidonic acid, Sephadex G-100, DE-52, Poly Buffer Exchangers 94 (PBE-94), Phenyl methyl sulfonyl fluoride (PMSF), EDTA, Acrylamide, Bis-Acrylamide, Coomassie brilliant blue, Lauryl sulphate (SDS) and protein size markers were procured from Sigma Chemicals Co (St. Louis, MO, USA). NDGA was a generous gift from department of chemistry, S.V. University. All other chemicals were reagent grade procured from Merck, Mumbai, India.
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10

Fura-5F-AM Calcium Signaling Assay

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Arachidonic acid, Cs-methanesulfonate and Na-methanesulfonate were purchased from Sigma. Fura-5F-AM was purchased from Setareh Biotech, LLC. 2-aminoethoxydiphenyl borate (2-APB) was purchased from Calbiochem. Cs-BAPTA was purchased from Invitrogen. GdCl3 was from Acros Organics. All dicer-substrate siRNAs (dsiRNAs) were purchased from IDT. The transfection kit (VCA-1003) for HEK293 cells was from Lonza. All other chemicals were from Fisher.
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