The largest database of trusted experimental protocols

6 protocols using na2hpo4

1

Bacterial Growth Media and Antibiotic Protocols

Check if the same lab product or an alternative is used in the 5 most similar protocols
All chemicals used in the study were purchased from Sigma-Aldrich unless stated otherwise. LB medium: 10 g l−1 tryptone, 5 g l−1 yeast extract, and 10 g l−1 NaCl. For agar plates, 15 g l−1 agar was added. M9 medium: 6.8 g l−1 Na2HPO4, 3 g l−1 KH2PO4, 0.5 g l−1 NaCl, 1 g l−1 NH4Cl), 0.34 g l−1 thiamine, 0.2% casamino acids (BD Biosciences), 0.4% glucose, 2 mM MgSO4, and 100 μM CaCl2. Antibiotic concentrations: where appropriate, the media contained ampicillin at a final concentration of 100 μg ml−1 from a 100 mg ml−1 aqueous stock solution and chloramphenicol at a final concentration of 25 μg ml−1 from a 34 mg ml−1 stock solution in absolute ethanol; for pOSIP-KO-mediated chromosomal integration, 50 μg mL−1 kanamycin-sulfate was used. The indicated concentrations of antibiotics were used for both LB and M9 media. Inducer concentration: an isopropyl-d-1-thiogalactopyranoside gradient was prepared at 0, 1, 5, 10, 20, 30, 50, 70, 100, 200, and 500 μM final concentrations, diluted from a stock in DMSO. Phosphate-buffered saline (PBS): 8 g l−1 NaCl, 0.2 g l−1 KCl, 1.44 g l−1 Na2HPO4, and 0.24 g l−1 KH2PO4. Kanamycin (2 mg ml−1) was added to the PBS before sampling in order to terminate protein expression.
+ Open protocol
+ Expand
2

Cultivation and protoplast preparation of E. faecalis

Check if the same lab product or an alternative is used in the 5 most similar protocols
E. faecalis NBRC 100480 was cultivated and protoplasts were prepared as previously described [23 (link)]. The protoplasts were centrifuged at 7000 rpm for 5 min and resuspended in DMB (5 g/L peptone, 1 g/L yeast extract, 0.1 g/L ferric citrate, 19.45 g/L NaCl, 5.9 g/L MgCl2, 3.24 g/L MgSO4, 1.8 g/L CaCl2, 0.55 g/L KCl, 0.16 g/L NaHCO3, 0.08 g/L KBr, 34 mg/L SrCl2, 22 mg/L H3BO3, 8 mg/L Na2HPO4, 4 mg/L Na2SiO3, 2.4 mg/L NaF, and 1.6 mg/L NH4NO3 [BD, Franklin Lakes, NJ]) containing 300 µg/mL penicillin G. The resulting suspension (5 µL) was diluted with 1 mL of DMB containing 300 µg/mL penicillin G (Wako, Osaka) and incubated at 24 °C.
+ Open protocol
+ Expand
3

Cultivating E. faecalis Protoplasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
E. faecalis NBRC 100480 was cultivated and protoplasts were prepared as previously described (Kami et al., 2019 (link)). The protoplasts were centrifuged at 7000 r.p.m. for 5 min and resuspended in Difco Marine Broth 2216 (DMB; 5 g/L peptone, 1 g/L yeast extract, 0.1 g/L ferric citrate, 19.45 g/L NaCl, 5.9 g/L MgCl2, 3.24 g/L MgSO4, 1.8 g/L CaCl2, 0.55 g/L KCl, 0.16 g/L NaHCO3, 0.08 g/L KBr, 34 mg/L SrCl2, 22 mg/L H3BO3, 8 mg/L Na2HPO4, 4 mg/L Na2SiO3, 2.4 mg/L NaF, and 1.6 mg/L NH4NO3 [BD, Franklin Lakes, NJ]) containing 300 µg/mL penicillin G. 2 mL of DMB containing 300 µg/mL of penicillin G (Wako, Osaka) was added to the resulting suspension (10 µL) and incubated at 24 °C.
+ Open protocol
+ Expand
4

Bacterial Growth Media Formulations

Check if the same lab product or an alternative is used in the 5 most similar protocols
All the chemicals used in the study were purchased from Sigma-Aldrich unless stated otherwise. LB medium: 10 g/l tryptone, 5 g/l yeast extract, and 10 g/l NaCl. For agar plates, 15 g/l agar was added. M9 medium: 6.8 g/l Na2HPO4, 3 g/l KH2PO4, 0.5 g/l NaCl, 1 g/l NH4Cl, 0.34 g/l thiamine, 0.2% casamino acids (BD Biosciences), 0.4% glucose, 2 mM MgSO4, and 100 μM CaCl2. The LB medium for overnight culture contained ampicillin and kanamycin at concentrations of 100 μg/ml to maintain the plasmids. The mixed medium for the microfluidic culture contained ampicillin and kanamycin at concentrations of 1 μg/ml at which the cells can grow normally and the plasmids can be maintained.
+ Open protocol
+ Expand
5

Western Blot Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For western blot analysis, cells or kidneys were lysed in lysis buffer solution of 150 mM NaCl (Sigma-Aldrich, #s9625), 20 mM Na2HPO4 (BDH, #10494 L)/NaH2PO4 (BDH, #102455 S), 10% glycerol (Sigma-Aldrich, #G7757), 1% Triton X-100 (pH 7.2), complete protease inhibitor cocktail (Roche, #11836145001) and phosphatase inhibitors (1 mM final concentration of glycerophosphate (Sigma-Aldrich, #G9891), sodium orthovanadate (Sigma-Aldrich, #S6508) and sodium fluoride (Sigma-Aldrich, #S6521)). Total lysates were then quantified with Bio-Rad Protein Assay Dye reagent (Bio-Rad Laboratories, #500-0006), and Laemmli buffer at a final concentration of 2× was added to the samples. Proteins were next resolved in 4–12% Tris–glycine gradient gels (Life Technologies, #NP0335BOX) and then transferred onto Immobilon-P polyvinylidene fluoride membranes (Millipore, #IPVH00010). Membranes were blocked with 5% milk in Tris-buffered saline, Tween 20 (Sigma-Aldrich, #P1379) (TBS-T). All the primary antibodies for western blot analysis were diluted in 3% BSA in TBS-T. HRP-conjugated secondary antibodies were diluted 1:10,000 in 5% milk, TBS-T, and detection was performed with ECL (GE Healthcare, #RPN2106) alone or supplied with 10% SuperSignal West Femto (Thermo Fisher Scientific, #34095) when necessary.
+ Open protocol
+ Expand
6

Snail Shell-Derived Hydroxyapatite

Check if the same lab product or an alternative is used in the 5 most similar protocols
All chemicals were used without further purification. Na2HPO4 (98%) and KH2PO4 (99%) were obtained from BDH. NaOH, EDTA, Nile blue A (98%), L-lysine, and methyl orange were purchased from International Fisher Scientific. Caffeine (99%), toluidine blue, Ni(NO3)2.6H2O (98%), Cd(NO3)2.4H2O (98%), and ascorbic acid were obtained from Sigma-Aldrich. Pb(NO3)2 (99%) was purchased from VWR Chemicals BDH and Cu(HCO2)2.2H2O (99%) from Merck Chemicals GmbH. Citric acid monohydrate and HCl (36%) were purchased from J.T. Baker and Pronalys AR, respectively. The phosphate buffer solutions used in this work consisted of a mixture of monobasic dihydrogen phosphate and dibasic monohydrogen phosphate. By varying the amount of each salt, we prepared a range of phosphate buffers with pHs between 5.0 and 9.0. Analytical solutions of NBA at various concentrations were obtained by dilution from a standard solution of a concentration of 0.01 M, using doubly distilled water.
Specimens of snail shells were collected from a local market in downtown Nkongsamba (Cameroon). The raw snail shells were washed with water, rinsed with distilled water, and dried at room temperature for two weeks. They were exploited to yield hydroxyapatite, as described in the next section.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!