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2 protocols using anti h2ak119ub1

1

ChIP-seq of LGR5+ Hair Follicle Stem Cells

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LGR5+ HFSCs were purified as previously described from anagen-synchronized HFs of Ring1a/b+/+ mice and were extracted following the protocol previously described. A total of 2.5 million cells were used for ChIP-seq as previously described (9 (link)). Sonicated chromatin was incubated with 10 μg of rabbit anti-RING1B antibody (homemade), anti-H2AK119Ub1 (8240, Cell Signaling Technology), anti-RYBP (AB3637, Millipore), and anti-CBX8 (39 (link)) overnight, and the immunocomplexes recovered using protein A–conjugated magnetic beads (Dynabeads, Life Technologies). Purified chromatin was decross-linked overnight in 0.1 M NaHCO3 and 1% SDS. Decross-linked DNA was purified. ISC-specific H3K4me3 ChIP-seq profile was obtained as previously described (9 (link)) using 5 μg of anti-H3K4Me3 antibody (catalog no. 39159, Active Motif).
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2

Comprehensive Epigenetic Regulation Analysis

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Western blot and ChIP analyses were performed with: anti-BAP1 (D7W70; Cell Signaling), anti-Suz12 (D39F6; Cell Signaling Technology), anti-FLAG (F3165; Sigma-Aldrich), anti-H3K27me3 (9733; Cell Signaling Technology), anti-H2AK119ub1 (8240; Cell Signaling Technology), anti-H3 (ab1791; Abcam), anti-H2A (07-146; Sigma-Aldrich), anti-RING1B (homemade (Chiacchiera et al., 2016 (link))), anti-PCGF1, anti-PCGF2, and anti-PCGF6 (Pasini’s lab, homemade (Scelfo et al., 2019 (link))), anti-JARID2 (13594, Cell Signaling Technology), anti-AEBP2 (14129; Cell signaling Technology), anti-HA (C29F4, Cell Signaling Technology), anti-ASXL2 (A302-037A, Bethyl), anti-ASXL1 (D1B6V, Cell Signaling Technology) anti-KDM1B/LSD2 (E1R60, Cell Signaling Technology), anti-OGT (SC-32921, Santa-Cruz), anti-HCFC1 (A301-400A, Bethyl), anti-FOXK2 (A301-730A, Bethyl), anti-MBD6 (SAB1305225-40TST, Sigma-Aldrich), anti-H3K27ac (AB4729, Abcam) anti-PCGF3/5 (AB201510, Abcam), anti-UTX (Helin lab, homemade (Agger et al., 2007 (link))), anti-MTF2 (Proteintech 16208-1-AP), anti-CBX7 (abcam, ab21873), anti-RYBP/DEDAF (Sigma-Aldrich, PRS2227), anti-H3K36me2 (abcam, ab9049), anti-RING1B-pS168 (abcam, ab234421).
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