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Kinetex pfp column

Manufactured by Phenomenex
Sourced in United States

The Kinetex PFP column is a high-performance liquid chromatography (HPLC) column designed for the analysis of a wide range of compounds. It features a pentafluorophenyl (PFP) stationary phase, which provides unique selectivity for the separation of both polar and non-polar analytes. The Kinetex PFP column is suitable for a variety of applications, including the analysis of pharmaceutical, environmental, and food samples.

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28 protocols using kinetex pfp column

1

Quantitative Detection of Neurotransmitters via HPLC-MS

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Analyses were performed with a complex Ultimate 3000 (Dionex, Sunyvale, USA) micro HPLC system and a Qexactive UHR mass spectrometer (Thermo Fisher Scientific, Waltham, MA, USA). For the separations, gradient elution (Maasz et al. 2017 (link)) were performed on a security guard column equipped Kinetex PFP column (100 mm × 2.1 mm i.d., particle size 2.6 µm, Phenomenex, Torrance, USA). The mass spectrometer equipped with a HESI source was used in the positive ion mode for mass detection. Filters of parent ion scan (SIM-single ion monitoring) and fragment ion scan (MS/MS) modes were used for selective and sensitive detection of analytes. The most intense precursor-to-fragment transitions were used for quantitative analysis; for DA: 154.1 → 137.1 m/z, for 5-HT: 177.1 → 160.1 m/z, for HA: 111.1 → 95.1, for Glu: 148.1 → 84.1 and for d4-DA: 158.1 → 141.1. To the fragmentation 35 eV was applied as the normalized collision energy (Sarvari et al. 2014 (link); Wei et al. 2014 ).
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2

HPLC Analysis of CoA Esters

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CoA esters were analyzed by HPLC using a Kinetex PFP column (5 mm, 100 A°, 250 3 4.6 mm; Phenomenex, USA) on a Shimadzu Prominence system with PDA detector (SPD-M20A). The temperature was set to 40 °C and a flow rate of 0.75 mL min− 1 was used. The injection volume was 5 μL. 100 mM ammonium acetate (eluent B) and acetonitrile (eluent A) were used as eluents. The separation started with 5% eluent A for 15 min followed by a gradient step (1 min) up to 80% eluent A, holding 80% eluent A for 1 min, an additional gradient (1 min) back to 5% eluent A and a re-equilibration with 5% eluent A for 8 min. For HPLC-electrospray ionization (ESI)-MS/MS, an Agilent 1100 HPLC system and the Kinetex PFP column (see above) connected to an LCQ ion trap mass spectrometer (Thermo Fisher Scientific) was used [30 (link)]. The injection volume was 50 μL. The column was run isocratically with 95% 100 mM ammonium acetate and 5% acetonitrile for 10 min at a flow rate of 0.75 ml/min and a temperature of 40 °C.
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3

LC-MS/MS Analysis of Labeled KP Metabolites

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Mixed standards and 100 µL aliquots of NE methanolic extracts were spiked with internal standard mixture containing labelled KP metabolites; and reconstituted in 100 µL of water with 20 µL aliquots injected for analysis. MRM LC-MS/MS analysis was conducted using a TSQ Vantage mass spectrometer (Thermo, Waltham, MA, USA) connected to Vanquish (Thermo-Dionex, Thermo, Waltham, MA, USA) solvent delivery/autosampler system. Chromatographic separation was achieved using a Kinetex™ PFP column (150 mm × 2 mm, 1.7 μm, 100 Å, Phenomenex, Torrance, CA, USA) by reverse phase gradient elution at 25 °C using a ramped gradient of 0.1% formic acid to 100% methanol by 8 min as detailed in Supplementary S1–S4 (Tables S4–S8) [41 (link)].
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4

HPLC-MS Protocol for Compound Analysis

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High Performance Liquid Chromatography-Mass Spectrometry analyses were performed on a Shimadzu Nexera UHPLC chromatograph interfaced with an Ab Sciex 3200 QTRAP mass spectrometer (AB SCIEX, Toronto, ON, Canada). HPLC analyses were performed using a Phenomenex Kinetex PFP column (3 × 150 mm) using water/formic acid 100/0.1 v/v (A) and acetonitrile/formic acid 100/0.1 v/v (B) as mobile phases at 0.8 ml/min flow. Runs were performed under the following conditions: 2 min at 25% B, then a linear gradient to 95% B in 26 min, followed by a 4-min purge step at 95% B and by a 8-min re-equilibration step to the starting conditions. MS analyses were performed under the following conditions: ion spray voltage: 5000 V, source temperature 350°C, declustering potential 50 V, ion source gas 20 l/min, curtain gas: 25 l/min. m/z ratios between 200 and 1300 were monitored.
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5

Quantification of Tocopherols in Biological Samples

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Tocopherols were quantified in plasma (collected at slaughter), liver, and endometrium by a validated method described earlier [62] . Briefly, tissue samples were saponified for 30 min at 70 • C in a shaking water bath. To both tissue and plasma samples butylated hydroxytoluene (BHT; 25 μL of a 1 mg/ml ethanolic solution) was added. Then all samples were extracted twice with n-Hexane. The supernatants were pooled and evaporated (Christ SpeedDry; Christ, Osterode Germany). The dried residues were resuspended and injected into a Jasco HPLC system (AS-950 Plus autosampler, PU-980 Plus pump, FP-950 Plus fluorescence detector, LG-980-02 gradient unit, and a 3-line degasser; Jasco, Groß-Umstadt, Germany). The tocopherols were separated on a Kinetex PFP column (2.6 μm, 150 × 4.6 mm; Phenomenex, Aschaffenburg, Germany) using a methanol: water (85:15, vol/vol) mobile phase. The fluorescence detector was set to an excitation wavelength of 296 nm and emission wavelength of 325 nm. Peaks were recorded and integrated using ChromPass version 1.8.6.1 (Jasco). The concentrations of tocopherols were quantified against external standard curves with authentic compounds (Sigma Aldrich, St. Louis, MO).
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6

HPLC and LC-MS Analysis of Acyl-CoA Metabolites

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Samples taken from the enzyme reactions for HPLC and LC-MS analysis were thoroughly mixed with dichloromethane in order to stop the reactions. The water phase obtained after centrifugation (16 000 3 g, 5 min) was used for analysis. For routine analysis of 2-hydroxyisobutyryl-CoA and 3-hydroxybutyryl-CoA, a Kinetex PFP column (5 mm, 100 A ˚, 250 3 4.6 mm; Phenomenex, USA) was used on a Shimadzu Prominence system with PDA detector (SPD-M20A). The eluents were 100 mM ammonium acetate (eluent B) and acetonitrile (eluent A). The method started with 5% eluent A for 5 min, followed by a gradient from 5% to 25% eluent A between 5 and 19 min; the flow rate was 0.75 ml min 21 and the column was maintained at a temperature of 408C. The injection volume was 5 ml.
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7

Quantifying Tocopherol Levels in Amaranth

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Tocopherol extractions and analyses were performed following the procedures described in Bruni et al. (2001) (link). In particular, the same amaranth flour amount for each sample (5 g), reported in the "Field Experiments and Plant Material" section, was placed in a flask containing 100 mL of methanol and stirred for 24 h in the dark at a constant temperature of 25°C. The samples were then filtered and centrifuged for 20 min (3000 rpm). The supernatant was recovered, dried with rotavapor, and weighed. Tocopherol analyses of the extracts were performed employing a modular JASCO high performance liquid chromatography (HPLC) unit characterized by a PU-2089Plus pump, a MD-2010Plus diode array detector (DAD), and a 20-μL sampler loop. Isocratic elution mode (methanol:water; 85:15) was used with a Phenomenex KINETEX PFP column ( 15´ 0.46 cm, 2.6 μm). Flow rate was 0.8 mL min -1 while absorbance was detected at 295 nm. All solvents used were chromatographic grade. Vitamin E stereoisomer peaks (a-, b-, g-, d-tocopherols) were identified by comparing their retention time with those of pure standards (Sigma-Aldrich). Integration of the peak areas was performed using a dedicated Borwin software (Borwin-PDA ver. 1.50, JMBS Developments). For each amaranth extract, qualitative and quantitative analyses were performed in triplicate.
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8

HPLC Analysis of Compound Mixtures

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The HPLC used for analyses was a Dionex Ultimate 3000 HPLC (ThermoFisher Scientific Inc., Waltham, MA, USA), equipped with a fraction collector, PDA detector and a (3 × 150 mm) Kinetex PFP column (Phenomenex Inc., Torrance, CA, USA) using water/formic acid 100/0.1 v/v (A) and acetonitrile/formic acid 100/0.1 v/v (B) as mobile phases, with a flow of 0.8 mL/min. Runs were performed in four steps as follows: 2 min at 25% B, 26 min with a linear gradient up to 95% B, 4 min purge step at 95% B and 8 min re-equilibration step.
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9

HPLC-based Mycotoxin Quantification

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Mycotoxin extraction was developed as detailed in Estiarte et al. (2016) . Separation, detection and quantification of AOH and AME were performed on a HPLC system model 2510 HPLC pump (Varian, Inc., Palo Alto, CA) connected to one in-line Spectroflow 757 UV/Vis absorbance detector (Applied Biosystems, Foster City, CA). A reverse phase Kinetex PFP column (5 µm, 4.6 × 150 mm, Phenomenex, Torrance, CA, USA) preceded by a KrudKatcher classic HPLC in-line filter (0.5 µm depth filter, Phenomenex, CA, USA) were used. Chromatographic and method performance characteristics for AOH and AME detection and quantification are detailed in Estiarte et al. (2016) .
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10

HPLC-DAD-ESI-MS Analysis of Phenolic Compounds

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HPLC–DAD–ESI-MS system (Shimadzu, Japan) was used. Separations were performed on a Kinetex PFP column (100 × 4.6 mm, 2.6 µm) (Phenomenex, Torrance, CA, USA) with the gradient elution program: 0 min–10% B, 60 min–40% B, 65 min–100% B; A: H2O/TFA, 100:0.1 (v/v), B: H2O/AcCN/TFA, 50:50:0.1 (v/v/v), at column temp. 20 °C, flow rate 1.0 mL/min, detection UV at λ–254 nm (simple phenols and polyphenols) at at λ–520 nm (anthocyanins). Mass spectra were acquired in negative (NI) ion mode, the nebulizing gas (nitrogen) flow was 1.5 L/min, desolvation line and block temperature were 250 °C and 200 °C, respectively; the remaining experimental parameters used were interface voltage—4.5 kV, the detector voltage—2.0 kV, and the drying gas (nitrogen) flow—16 L/min. The content of ellagic acid and its derivatives, including ellagitannins, was calculated on ellagic acid, and the anthocyanin content was calculated on cyanidin 3-O-glucoside. Moreover, the concentrations of gallic, caffeic, protocatechic acids, epicatechin, and quercetin 3-O-glucuronide were determined in the analyzed extracts.
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