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Cel mir 238 3p

Manufactured by Qiagen
Sourced in United States

Cel-miR-238-3p is a laboratory equipment product manufactured by Qiagen. It is a microRNA molecule that is involved in cellular processes. The core function of this product is to serve as a research tool for studying the role of this specific microRNA in biological systems. No further details or interpretation on the intended use of this product can be provided in an unbiased and factual manner.

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2 protocols using cel mir 238 3p

1

Normalizing RNA Isolation Variability

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The results were normalized to allow for sample-to-sample variation in the RNA isolation procedure, using the results of the spiked exogenous control cel-miRNAs as described previously (8 (link),9 (link)). Two synthetic RNA oligonucleotides corresponding to cel-miR-39-3p and cel-miR-238-3p (Qiagen, Inc., Valencia, CA, USA) were used. The spike-in oligonucleotides were introduced (as a mixture containing 250 fmol of each oligonucleotide in 10 µl water) following the addition of ISOGEN-LS (Nippon Gene Co., Ltd., Tokyo, Japan) to lymph and plasma samples. Total RNA from lymph and plasma samples was extracted using ISOGEN-LS, according to the manufacturer's protocol; total RNA from tissue samples was extracted with RNAiso Plus (Takara Bio, Inc., Shiga, Japan).
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2

Quantitative miRNA and mRNA Expression Analysis

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Total RNA was isolated from skin biopsy specimens, fibroblasts and endothelial cells using an miRNeasy mini kit (Qiagen). Serum miRNAs were isolated using a PAXgene blood miRNA system (Qiagen). An miScript reverse transcription kit (Qiagen) and miScript SYBR Green PCR kit (Qiagen) were used to measure the expression levels of selected miRNAs in a model 7500 real-time PCR system analyzer (Applied Biosystems). miRNA-specific primers and the miScript Universal Primer (Qiagen) were used. The expression of the U6B small nuclear RNA (RNU6B) was used as the endogenous control to normalize the sample data. The spiked Caenorhabditis elegans miRNA-238 (Qiagen, cel-miR- 238-3p) was used as an exogenous control to normalize the serum miRNA data. To detect mRNA, cDNA was prepared using a Reverse Transcription System (Promega, USA) and amplified using real-time PCR with SYBR Green (SYBR Premix Ex Taq RT-PCR kit; Takara, Shiga, Japan) using the primers shown in Supplemental Table 1. GAPDH expression was used as the endogenous control to normalize the sample data. Relative expression levels were calculated using the 2−ΔΔCt method. The miRNA primers were purchased from RiboBio (China) and are listed in Supplemental Table 3.
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