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Antibody coated magnetic beads

Manufactured by Miltenyi Biotec
Sourced in United States, Canada, Germany

Antibody-coated magnetic beads are a type of lab equipment used for the isolation and purification of target cells, proteins, or other biomolecules from complex samples. The beads are coated with specific antibodies that can bind to the desired target, allowing for its separation and extraction from the sample using a magnetic field.

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10 protocols using antibody coated magnetic beads

1

Isolation and Purification of Dendritic Cells and Macrophages

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Tonsil samples were digested as described previously56 (link). In brief, samples were cut into small fragments, digested with 0.1 mg mL−1 Liberase TL (Roche) in the presence of 0.1 mg mL−1 DNAse (Roche) for 40 min at room temperature before addition of 10 mM EDTA. Cells were filtered on a 40 μm cell strainer (BD Falcon) and washed. Light density cells were isolated by centrifugation on a Ficoll gradient (Lymphoprep, Greiner Bio-One). DCs were enriched by depletion of cells expressing CD3, CD15, CD19, CD56, and CD235a using antibody-coated magnetic beads (Miltenyi). Cell subsets were further isolated by cell sorting on a FACSAria instrument after staining for CD11c, HLA-DR, CD14, CD304, CD1c, and CD141 (BD Biosciences). Peripheral blood mononuclear cells (PBMC) were prepared by centrifugation on a Ficoll gradient. Blood CD14+ monocytes were isolated from healthy donors’ PBMC by positive selection using anti-CD14-coated magnetic beads according to manufacturer’s instructions (Miltenyi). DCs and macrophage population from ascites were isolated after centrifugation of total ascites cells on a Ficoll gradient, enrichment by depletion of cells expressing CD3, CD15, CD19, CD56, and CD235a using antibody-coated magnetic beads (Miltenyi), and cell sorting on a FACSAria instrument. Ascites DCs were gated as HLA-DR+CD11c+CD1c+CD16 and ascites macrophages as HLA-DR+CD11c+CD1cCD16+.
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2

Modulation of Cytokine Production in Monocytes

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The activity of 28 was evaluated on LPS-stimulated
cytokine production in monocytes. Peripheral blood mononuclear cells
(PBMCs) were first isolated from blood using Lymphoprep-based separation,
a method which is based on the lower buoyant density of mononuclear
cells (monocytes and lymphocytes) compared with other blood cell types
such as erythrocytes and polymorphonuclear leukocytes (granulocytes).
From these PBMCs, CD14+ monocytes were selected using antibody-coated
magnetic beads (Miltenyi Biotec, DE). CD14+ monocytes were seeded
in 96-well plates and preincubated with a serial dilution of 28 for 1 h before LPS triggering (Sigma-Aldrich; 100 ng/mL
final concentration). TNFα and IL-10 were measured in the supernatant
after 4 h of LPS triggering using enzyme-linked immunosorbent assay
(ELISA)-based readouts.
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3

Quantifying CD8+ T Cell Activation

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Human MoDC (1 × 106 cells/mL) were transduced with DAP12 adenoviruses or LPS for 48 h. Supernatants were collected and analyzed for the presence of IL-12p70, IL-10, TNF-α, IFN-γ, and IL-1β by ELISA (Ready-SET-Go kit) following the manufacturer’s instructions (eBioscience; San Diego, CA, USA). ELISA kit for IL-15 were purchased from BD Biosciences. For detection of CD8+ T cells secreting IFN-γ, EliSpot was performed using CD8+ T cells from spleens that were purified by positive selection using antibody-coated magnetic beads following the directions provided by the vendor (Miltenyi Biotec; Auburn, CA, USA). Responder (CD8 purified) cells were incubated at 3 × 105, 1 × 105 and 3 × 104 cells per well together with 5 × 104 stimulator cells (B16 cells). Cultures were incubated at 37 °C for 20 h and spots (IFN-γ producing cells) were developed as described by the EliSpot kit manufacturer (Mabtech, Inc.; Mariemont, OH, USA). Spot counting was done with an AID EliSpot Reader System (Autoimmun Diagnostika GmbH; Strassberg, Germany).
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4

CD4+ T Cell Proliferation Assay

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CD4+ cells were negatively selected from total splenocytes by use of a cocktail of antibody-coated magnetic beads from Miltenyi Biotech (CD8a, CD11b, CD11c, CD19, CD45R (B220), CD49b (DX5), CD105, Anti-MHC-class II, and Ter-119), according to manufacturer's instructions. CD4+ T cells were labeled with carboxyfluorescein diacetate succinimidyl ester (CFSE) (Life Technologies Inc.) and cultured at 1 × 105cells/well for 48 hours in anti-CD3 (BD) and anti-CD28 (BD) coated microplates (5 μg/mL) with or without mouse rIL2 (BD) (10 ng/mL). Cells were cultured in RPMI-1640 supplemented with Glutamax, 10% fetal calf serum, 0.02 mM 2β-mercaptoethanol, and antibiotics. CFSE dilution analyzed by flow cytometry was used to determine the percentage of proliferating CD4+.
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5

Lymphocyte Subpopulation Kinetics by Deuterium-Glucose Labeling

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Proliferation and disappearance rates of lymphocyte subpopulations were measured using deuterium-glucose labeling [28 (link), 30 (link)]. Subjects received 60g of 6,6–2H2-glucose (Cambridge Isotopes) orally in half-hourly aliquots over 10 hours, as described [31 (link)], monitoring plasma glucose deuterium-enrichment for precursor estimation. Blood was taken 4, 10, and 21 days post-labeling and peripheral blood mononuclear cell fractions sorted by negative-selection for CD45R0 and CD45RA into “naive” (CD45R0) and “memory” (CD45RA) subpopulations, then by positive-selection for CD8 and CD4 using antibody-coated magnetic beads (Miltenyi Biotec) (Supplementary Information) [31 (link)]. Purities were confirmed with both CD45RA and CD45R0. (Definition of “naive” cells by CD45R0 would have an expected specificity of 97%–98% for CD4 cells and 87%–93% for CD8 cells [32 (link)].) Lymphocyte subpopulations were analyzed for DNA deuterium-labeling by gas chromatography mass spectrometry, as described [28 (link), 33 (link)].
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6

Monocyte Cytokine Release Assay

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Activity of 32 was evaluated on LPS-stimulated
cytokine release in monocytes. Peripheral blood mononuclear cells
(PBMCs) were first isolated from blood using lymphoprep-based separation,
a method which is based on the lower buoyant density of mononuclear
cells (monocytes and lymphocytes) compared to other blood cell types
such as erythrocytes and polymorphonuclear leukocytes (granulocytes).
From these PBMCs, CD14+ monocytes were selected using antibody-coated
magnetic beads (Miltenyi Biotec). CD14+ monocytes were seeded in 96-well
plates and preincubated with a serial dilution of 32 for
1 h before LPS triggering (Sigma-Aldrich; 100 ng/mL final concentration).
TNFα (4 h), IL-12 (20 h), and IL-10 (4 h) were measured in the
supernatant at indicated time points after LPS triggering using standard
enzyme-linked immunosorbent assay (ELISA)-based read-outs.
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7

Elucidating CTB-INS Induced DC Tolerance

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Before the method of CTB-INS induction of DC tolerance can be used for protection against autoimmune disease development in patients, the mechanism underlying CTB-INS induction of DC tolerance in healthy subjects must be elucidated. To accomplish this goal, monocyte-derived dendritic cells (moDCs) were differentiated from freshly collected human peripheral blood monocytes. Peripheral blood monocytes were isolated from 12 anonymized 18 – 40 yr old blood donors from the San Bernardino Blood Bank. Equal numbers (n=6) of randomly selected healthy male and female blood donors were chosen for this study. After collection of peripheral blood from the subjects, erythrocytes were removed from the blood samples by lysis with NH4Cl and monocytes were isolated from the lymphocyte fraction by CD14+ selection on antibody coated magnetic beads (Miltenyi Biotec, Auburn CA). The monocytes were counted and cultured for 6 days in complete RPMI culture medium (ThermoFisher), containing 10% bovine serum, GMCSF and IL-4 to differentiate monocytes into immature DCs as previously described Kim et al., [42 ].
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8

CD4+ T Cell Proliferation Assay

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CD4+ cells were negatively selected from total splenocytes by use of a cocktail of antibody-coated magnetic beads from Miltenyi Biotech (CD8a, CD11b, CD11c, CD19, CD45R (B220), CD49b (DX5), CD105, Anti-MHC-class II, and Ter-119), according to manufacturer's instructions. CD4+ T cells were labeled with carboxyfluorescein diacetate succinimidyl ester (CFSE) (Life Technologies Inc.) and cultured at 1 × 105cells/well for 48 hours in anti-CD3 (BD) and anti-CD28 (BD) coated microplates (5 μg/mL) with or without mouse rIL2 (BD) (10 ng/mL). Cells were cultured in RPMI-1640 supplemented with Glutamax, 10% fetal calf serum, 0.02 mM 2β-mercaptoethanol, and antibiotics. CFSE dilution analyzed by flow cytometry was used to determine the percentage of proliferating CD4+.
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9

B Cell Activation and Cytokine Profiling

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B cells were isolated from splenocytes by negative selection using a cocktail of antibody coated magnetic beads (Miltenyi Biotec, Germany), and the purity was confirmed to be >95%. Purified B cells were stimulated in vitro with anti-CD40/IgM or LPS for 72 h. The supernatant was stored for ELISA, and for intracellular staining of IL-10, the cells were stimulated with a leukocyte activation cocktail containing golgi stop for the last 5 hours of culture before flow cytometric analysis.
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10

Purification of CD4+ T cells and CD11c+ cells

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Spleen cells were purified according to standard protocols as follows. CD4 + T cells were negatively selected using a cocktail of antibody-coated magnetic beads from Miltenyi Biotech (anti-CD8a, anti-CD11b, anti-CD45R, anti-DX5, anti-ter 119), according to manufacturer's instructions, yielding CD4 + cells with >95% purity. CD11c + cells were positively selected with biotin-conjugated anti-CD11c mAb (7D4, PharMingen), streptavidin microbeads (Miltenyi Biotec), followed by 2 consecutive magnetic cell separations using LS columns (Miltenyi Biotec), yielding CD11c + cells with >80% purity.
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