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Flat bottomed 96 well tissue culture plates

Manufactured by Corning

Flat-bottomed 96-well tissue culture plates are laboratory equipment used for cell culture applications. They provide a standardized multi-well format with a flat-bottom design to facilitate cell growth, observation, and various assays.

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2 protocols using flat bottomed 96 well tissue culture plates

1

Anti-TF mAb and ADC Binding Assay

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To analyze the affinity and internalization of the anti‐TF mAbs and ADCs, the mAbs and ADCs were directly conjugated with Alexa647 using a monoclonal antibody labeling kit (Invitrogen) according to manufacturer's instruction. The affinities of the mAbs and the ADCs against pancreatic cancer cells were analyzed by flow cytometry. Inside a 2 ml tubes, 2 × 105 harvested cells were incubated with 0.2 μg of each Alexa647‐conjugated mAbs and ADCs for 30 min at 4°C. After washing with PBS containing 0.5% bovine serum albumin (BSA) and 2 mM EDTA (B. E. PBS), the cells were nuclear stained with a propidium iodide (PI) solution (Invitrogen, Eugene, OR). The stained cells were analyzed by flow cytometry using Guava easyCyte (Millipore, Billerica, MA).
To analyze the internalization of the anti‐TF ADC into cancer cells, 3 × 103 cells of BxPC‐3 were pre‐cultured in flat‐bottomed 96‐well tissue culture plates (Corning, Corning, NY) overnight. Then, 0.2 μg of Alexa647‐conjugated ADC were added to the cells and incubated at 37°C for 0 and 3 hr. To identify the lysosomes, the cells were also incubated for 1 hr with 50 nM of LysoTracher (Invitrogen). After rinsing with PBS, the cells were fixed with 4% paraformaldehyde (Wako) for 10 min and then nuclear stained with a 4′6‐diamidino‐2‐phenylindole‐2HCl (DAPI) solution (Roche, Basel, Switzerland).
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2

Automated Dose-Response Cell Assay

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Cells were plated at 1000 cells per well in flat-bottomed 96-well tissue culture plates (Corning). 24 h later, drugs were added at 4 different concentrations in triplicate technical replicates, with triplicate untreated control wells. 72 h after drug addition, cells were fixed in 4% paraformaldehyde and washed in PBS. For automated microscope analysis, cells were permeabilised with 0.1% Triton-X (Sigma) in PBS, then stained with CellMask deep red (Life Technologies H32721, used at 1:30,000 dilution) and 1 μg/ml DAPI (Sigma) for 1 h. Cells were washed twice with PBS. Cell images were acquired using an InCell 1000 automated microscope (GE), and then analysed using InCell Developer Toolbox software (GE) to determine the number of cells. Data was averaged for the triplicate technical replicates and normalized to the untreated wells. Results from at least three independent biological repeat experiments were entered into Graph-Pad Prism software to determine the dose response curve, IC50 and 95% confidence intervals for the IC50, using the nonlinear regression analysis of log(inhibitor) versus response with a variable slope. Drug details can be found in the supplementary information.
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