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5 protocols using dapi staining solution

1

Patchouli Alcohol Protects Against D-Galactose-Induced Oxidative Stress

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Patchouli alcohol (PA) (purity ≥98%) was purchased from Mansite Biotechnology Co., Ltd. (Chengdu, China). PA was dissolved in dimethyl sulfoxide (DMSO) for subsequent cell treatment (final DMSO concentration did not exceed 0.1% in all experiments). D-gal (purity ≥98%) was purchased from Kerui Biotechnology Co., Ltd. (Wuhan, China). The assay kits for MDA, SOD, GSH, and CAT were obtained from Jiancheng Bioengineering Institute (Nanjing, China). The DAB chromogenic kit and DAPI staining solution were obtained from Servicebio (Wuhan, China). The Dulbecco's modified eagle medium-F12 (DMEM) and fetal bovine serum (FBS) were obtained from HyClone Co. (Logan, USA), and 1% penicillin/streptomycin was ordered from Servicebio (Wuhan, China). The antibody for collagen II (COL2A1, GB11021) and HO-1(GB11104) was obtained from Servicebio (Wuhan, China). The antibodies against glyceraldehyde phosphate dehydrogenase gene (GAPDH, A19056), lamin B (A1910), aggrecan (ACAN, A8536), a disintegrin and metalloproteinase with thrombospondin 5 (ADAMTS5, A2836), and matrix metalloproteinase 13 (MMP13, A11148) were obtained from Abclonal (Wuhan, China). The antibodies of TP53 (AF0879), Nrf2 (AF7006), and Cyclin-Dependent Kinase Inhibitor 1A (CDKN1A/p21Cip1/Waf1, AF6290) were purchased from Affinity Biosciences Ltd. (Cincinnati, USA). All primers were obtained from Tianyi Biotech Co., Ltd. (Wuhan, China).
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2

Immunofluorescence Staining Protocol

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After dewaxing and rehydration, paraffin sections were treated with Citrate Antigen Retrieval Solution (BBI E673001), and then blocked with blocking buffer (2% FBS, 3% BSA, and 0.2% Triton X‐100 in PBS). The sections were incubated with primary antibodies diluted in blocking buffer overnight at 4°C (isotype‐matched antibodies were used as controls). After washing thrice with PBST (PBS with 0.2% Triton X‐100), the sections were incubated with secondary antibodies diluted with blocking buffer for 2 h at 25–30°C in the dark. The nuclei were stained with a DAPI staining solution (Servicebio G1012) for 10 min. Slides were mounted with Antifade (Servicebio G1401). The IF‐stained sections were examined using digital slide scanning (Pannoramic DESK, P‐MIDI, P25) and analyzed using CaseViewer 2.4 (3DHISTECH).
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3

Quantifying GPX4 and Neuron Coexpression

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The paraffin sections of mice brains were prepared as above. After antigen retrieval, the tissue sections were blocked with blocking buffer, then incubated with the primary antibody Anti-GPX4 (ET1706-45, HUABIO, China) and Anti-NeuN (66836-1-Ig, Proteintech, China), or Anti-CD8 (GB13429, Servicebio, China) and Anti-CD3 (60181-1-Ig, Proteintech, China) overnight at 4 °C, and with the secondary antibody for 1 h at room temperature, including Cy3 conjugated Goat Anti-Rabbit IgG (GB21303, Servicebio, China) and FITC conjugated Goat Anti-Moue IgG (GB22301, Servicebio, China). The nuclei were stained with DAPI staining solution (G1021, Servicebio, China) for 10 min. Finally, the slides were mounted in Antifade (G1401, Servicebio, China) and examined using digital slide scanning (Pannoramic DESK, P-MIDI, P25), and analyzed using CaseViewer 2.4 (3DHISTECH). The relative expression of GPX4 and NeuN was calculated using fluorescent density, analyzed through ImageJ software, and then standardized to DAPI count.
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4

In Situ Detection of MIR-7-5p and HDAC7-AS1 in Aortic Roots

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MIR-7-5p detection probe 5′-UGG AAG ACU AGU GAU UUU GUU GUA ACA AAA UCA CUA GUC UUC CAU U-3′ was designed and synthesized by Servicebio. HDAC7-AS1 detection probe 5′-TGA GCT CAG ACT GAA GGA TCT TAG TAA GTG TGG AGA TGG GAC ACA AAC AAA GGT AGG CGA AGC GGA A-3′ was designed and synthesized by Shanghai Gene Pharma Co., Ltd. Paraffin sections of aortic roots were dehydrated in xylene. The sections were covered with hybridization buffer (Cat. No. G3016-3; Servicebio) and placed on an electric heating plate for 5 min. Hybridization with the probes was performed at 55°C for 16 h. Then, the sections were washed with 1×saline sodium citrate (SSC)0.1% SDS (Servicebio) twice at room temperature and 0.2×SSC0.1% SDS (Servicebio) twice at 55°C. After 5% BSA blocking for 1 h, the sections were incubated with a DIG-488 antibody (Servicebio) at room temperature for 1 h. The sections were washed twice with PBS, and 5mg/mL DAPI staining solution (Servicebio) was added dropwise to the sections followed by incubation in the dark for 10 min. Samples were washed with PBS, and antifluorescence quenching mounting tablets (Beyotime) were added dropwise to mount the slides. The samples were visualized by a confocal laser scanning microscopy (Nikon N-SIM) at wavelengths of 405 and 561 nm .
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5

Quantifying PTEN and P53 in OC Cells

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The expression of PTEN and P53 in OC cells was detected using the immunofluorescence assay. After the cells were treated with puerarin, fixed with paraformaldehyde, permeated by 0.5% Triton X-100, and blocked with 3% BSA, the primary antibodies for PTEN and P53 were added for labeling at 1/500 dilution overnight at 4°C, followed by addition of the secondary antibody of goat anti-rabbit IgG H&L (Alexa Fluor® 488) for another 0.5 h of incubation. Then, DAPI staining solution (Servicebio, China) was used for nuclear staining. Finally, an inverted fluorescence microscope (Ts2-FC, Nikon, Japan) was used for image observation.
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