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3 protocols using mouse anti hcn1

1

Quantitative Analysis of HCN Channel Expression

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For protein isolation, human SAN and atrial tissue were homogenized in 2x urea buffer20 (link) (10μl buffer per 1mg tissue) followed by centrifugation at 14,000 rpm for 10 min at 10°C, and the supernatant was collected. Protein yield was quantified using RCDC protein assay (Bio-rad). Equal amounts (20μg/sample) of proteins were separated by SDS-PAGE 12% (200:1) polyacrylamide gels and transferred to 0.45μM low fluorescence PVDF membrane by methods previously described20 (link). After blocking, membranes were incubated with various primary antibodies overnight at 4°C: mouse anti-HCN1 (1:500, Abcam), rat anti-HCN4 (1:100, Abcam), rabbit anti-HCN2 (1:500, Alamone), and rabbit anti-Cx43 (1:8,000, Sigma-Aldrich). Mouse anti-GAPDH (1:20,000, Sigma-Aldrich) was used as reference for equal protein loading and to normalize HCN channel protein band intensity. Subsequently, 1:2,000 diluted fluorescent DyLight conjugated secondary antibodies (Jackson ImmunoResearch Laboratories) were applied to membranes for 1 hour at room temperature. The specific bands were detected on a Typhoon 9410 imager (GE Healthcare) and quantified by densitometry analysis (ImageQuant, GE Healthcare).
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2

Immunohistochemical Analysis of Ion Channels

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Cryosections were fixed with −20°C methanol for 5min before immunostaining. Sections were permeabilized with 0.1% Triton X-100 (Sigma Aldrich), blocked with 1% bovine serum albumin, and incubated with primary antibodies overnight at 4°C. The following day, sections were incubated in secondary antibodies for 2 hours at room temperature and mounted in ProLong® Gold Antifade Mountant with DAPI (Life Technologies). The primary and secondary antibodies include: mouse anti-HCN1 (1:100, Abcam), rat anti-HCN4 (1:100, Abcam), rabbit anti-HCN2 (1:100, Alamone), rabbit anti-Cx43 (1:400, Sigma-Aldrich), mouse anti-α-actinin (1:200, Abcam), goat anti-rabbit Alexa Fluor 488 (1:200, Life Technologies), and goat anti-mouse Alexa Fluor 568 (1:200, Life Technologies). Paraffin sections were dewaxed and heated in citrate-based buffer for antigen retrieval before the immunostaining protocol. Sections were imaged using an Olympus FV1000 Filter confocal microscope and florescence density was measured by ImageJ software. A summary of antibodies used in immunohistochemistry protocols is provided in Supplemental Table I, and the specificity of antibody is discussed in Supplemental Material (Supplemental Figure I).
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3

Protein Isolation from Mouse Cardiac Tissues

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For protein isolation, mouse SAN, atrial, and left ventricular tissue from 3-month-old female WT and HCN4FEA mice was snap-frozen in liquid nitrogen. Samples were homogenized on dry ice using a mortar and pestle and suspended in homogenization buffer (2% sodium dodecyl sulfate, 50 mM Tris and proteinase inhibitor cocktail mix). After heating at 95 °C for 15 min followed by centrifugation at 1000 × g for 10 min to remove cell debris, the resulting supernatant was used in western blot analysis as previously described38 (link). The following antibodies were used: mouse anti-HCN1 (1:1000; Abcam, UK), rat anti-HCN4 (1:500; Santa Cruz Biotechnology, USA), rabbit anti-HCN2 L (1:50046 (link)), and mouse anti-beta-tubulin (E7, 1:2000; Developmental Studies Hybridoma Bank, USA).
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