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4 protocols using af4666

1

Immunohistochemistry of Embryonic Lung Vasculature

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Lungs were harvested and fixed as previously described (Frank et al., 2019 (link)). They were then washed, dehydrated, embedded in paraffin, and 6-µm sections were obtained. IHC was performed on E15.5, E17.5 and E18.5 sections. In brief, the sections were deparaffinized and rehydrated followed by antigen retrieval (Reveal Decloaker, MSPP-RV1000M, Biocare Medical). The sections were incubated with 3% H2O2 for 15 min to quench endogenous peroxidases, blocked with 5% donkey serum, and, finally, incubated with primary antibody (rabbit anti-VWF, 1:250, F3520, Sigma-Aldrich; goat anti-EMCN, 1:200, AF4666, R&D Systems; mouse anti-ACTA2, 1:500, A5228, Sigma-Aldrich; rabbit anti-RFP, 1:50, 600-401-379, Rockland Immunochemicals) in 0.1% PBST overnight at 4°C. The presence of relevant proteins was visualized using Alexa Fluor secondary antibodies (donkey anti-mouse Alexa Fluor 488, 1:250, A-21202, Sigma-Aldrich; donkey anti-rabbit Alexa Fluor 555, A-31572, Thermo Fisher Scientific; donkey anti-goat Alexa Fluor 647 1:250, A-21447, Thermo Fisher Scientific).
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2

Multicolor Immunofluorescence for Ki67, CD45, and Endomucin

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Slides containing cytospin-isolated cells were fixed and permeabilized with 3.7% formaldehyde and 0.1% triton for 20 min at room temperature (RT). After blocking with 5% BSA in PBS for 1 h, slides were incubated with anti-Ki67 (1:200, thermofisher-RM-9106), CD45 (1:200, Invitrogen-16-0451), and endomucin antibodies (1:200, R&D-AF4666) overnight at 4 °C. Slides were washed with PBST buffer followed by incubation with donkey anti-rat (1:500, Invitrogen A-21208), donkey anti-goat secondary (1:500, Invitrogen A-11055) or antibodies conjugated with Alexa Fluor 488 or donkey anti-rabbit IgG conjugated with Alexa Fluor 647 (1:500, Invitrogen A31573) in a dark chamber for 1 h at RT. Nuclei were stained by 4,6-diamidino-2-phenylindole (DAPI). Images were captured using Nikon Fluorescent microscope.
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3

Immunofluorescence Staining of Murine Placental Tissue

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Placentas at 18.5 dpc were collected and fixed overnight in 4% PFA at 4°C. The tissues were then processed for paraffin embedding. Sections of size 5 μm thickness were sliced,
deparaffinized, and rehydrated. Antigen retrieval was performed by boiling the sections for 20 min in a citrate-based antigen-unmasking solution. Non-specific binding was blocked using 4%
normal horse serum for 30 min.
The following primary antibodies were used: Rabbit anti-Nrk (Merck, HPA017238, 1:100), goat anti-endomucin (R&D Systems, MN, USA, AF4666, 1:200), goat anti-proliferin (R&D Systems,
AF1623, 1:200), and goat anti-IGF1r (R&D Systems, AF305-NA, 1:200), which were incubated overnight at 4°C. The secondary antibodies used were Alexa Fluor® 488 donkey anti-rabbit IgG
H&L (Jackson ImmunoResearch, 711-545-152, 1:500) and Alexa Fluor® 594 donkey anti-goat IgG H&L (Abcam, Cambridge, UK, ab150132, 1:500), which were incubated for 1 h at 20–25°C.
Counterstaining and mounting were performed using VECTASHIELD® with DAPI (Vector Laboratories, H-1200).
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4

Whole-Mount Imaging of Lung Vasculature

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Lungs were harvested at E12.5, E13.5, E15.5, E17.5 and E18.5 from both heterozygous (Cxcl12DsRed/+) and homozygous knockout (Cxcl12Dsred/DsRed) mice. Based on previously established protocols (Das et al., 2019 (link)), lungs were fixed in 2% paraformaldehyde for 4 h and then imaged for DsRed to evaluate the arterial endothelium or prepared for immunofluorescence-based whole-mount imaging. Lung lobes were incubated with primary antibody (rabbit anti-VWF, 1:100, F3520, Sigma-Aldrich; goat anti-EMCN, 1:200, AF4666, R&D Systems), in 5% donkey serum and 0.5% Triton X-100 in PBS (PBST) for 4 h at room temperature (RT) on a shaker, and overnight at 4°C on a shaker. The samples were washed in 0.5% PBST (four 30 min washes at RT), then overnight at 4°C on a shaker. The samples were then incubated in secondary antibody (donkey anti-mouse Alexa Fluor 488, A-21202 and anti-goat Alexa Fluor 647, A21447, Thermo Fisher Scientific, 1:250), in 5% donkey serum and 0.5% PBST for 1 h at RT on a shaker followed by overnight at 4°C. The lungs were washed in 0.5% PBST (four 30 min washes at RT), fixed in 2% paraformaldehyde for 2 h at RT and then washed with PBS (two 30 min washes at RT). Finally, the lungs were cleared using CUBIC (RIA reagent) overnight at 37°C, and then stored at 4°C until imaged using a Leica DMi8 Thunder system and/or Leica DMi8 confocal microscope.
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