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Cellsearch

Manufactured by Menarini Silicon Biosystems
Sourced in Italy, United States

The CellSearch system is a lab equipment product developed by Menarini Silicon Biosystems. It is designed to detect and enumerate circulating tumor cells (CTCs) in a patient's blood sample. The CellSearch system uses immunomagnetic capture and fluorescence-based detection to identify and quantify CTCs.

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14 protocols using cellsearch

1

Retrospective Analysis of HER2 Expression in Metastatic Breast Cancer CTCs

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Digitally stored CellSearch® (Menarini Silicon Biosystems, Huntingdon Valley, PA, USA) image files from 98 metastatic breast cancer patients from a previously reported study (CLCC-IC-2006-04 study, ClinicalTrials.gov Identifier: NCT00898014) were re-analyzed [3 (link), 9 (link)]. The original study included 267 patients with either HER2+ or HER2− primary tumor, whose characteristics at the baseline have been previously described [9 (link)]. Of these samples, 114 were further screened for HER2 expression on CTCs. These samples had been processed with the CellSearch system using the CTC kit, as previously described [7 ] including an additional fluorescein (FITC)-conjugated monoclonal antibody recognizing HER2 (clone Her81) in the staining mixture [11 (link)]. The specific clone recognizes an epitope in the extracellular domain of HER2, and it does not cross block binding of the FDA-cleared trastuzumab used in the clinics [11 (link)]. Ninety-eight out of 114 image datasets (where the anti-HER2 had been included in the staining mix) were available for the present analysis.
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2

Identifying and Characterizing Circulating Tumor Cells

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The enriched samples were cyto-centrifuged onto glass slides and CTCs identified by immunocytochemistry (ICC) using the CellSearch® antibody cocktail (pan-Cytokeratin/CD45/DAPI; Menari-Silicon Biosystems, PA, USA). Briefly, the slides were air dried overnight and incubated with the combination of CellSearch® (Menarini Silicon Biosystems Inc, PA, USA) reagents (20 µL staining reagent, 20 µL permeabilization buffer, 20 µL fixation buffer, 10 µL DAPI and 130 µL 1× PBS). The slide was incubated for 1.5 h at room temperature, washed three times in 1× PBS. Putative CTCs were further characterized for EGFR exon 19 deletion (1:100 dilution) (EGFR E746-A750, Cell Signaling, Beverly, MA, USA) and PD-L1 (1:200 dilution) (anti-PD-L1 (28-8)). The slides were mounted with Prolong Gold mounting medium (Molecular Probes, Eugene, OR, USA) to prevent photo-bleaching and preserve the fluorescent labelled molecules for long term storage, coverslipped and imaged using a Nikon Epifluorescence microscope (Nikon, Tokyo, Japan). CTCs were identified as intact, pan-cytokeratin+, DAPI+, CD45 cells larger than 4 µm. The mean fluorescence intensity (MFI) was measured per CTC by determining the fluorescence intensity per CTC and subtracting this from the local background intensity. This was compared to the MFI of known NSCLC cancer cell lines and controls.
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3

Circulating Tumor Cells Enumeration

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Circulating tumor cells were detected through two methods, one EpCAM-dependent (CellSearch) and the other size based (ScreenCell). Peripheral blood samples were drawn after informed consent into two tubes, after discarding the first milliliters to avoid contamination with cutaneous epithelial cells taken by the needle during the sampling. 7.5 mL of blood was collected in CellSave preservative tube (Menarini Silicon Biosystems, Castel Maggiore, Bo, Italy) and processed by CellSearch (Menarini Silicon Biosystems), employing CellSearch CTC kit, according to manufacturer's instructions. Six milliliters of blood was collected in tube containing K2EDTA and processed by ScreenCell Cyto kit (ScreenCell, Sarcelles, France) to isolate fixed cells for cytological studies. Briefly, in order to fix the cells and lyse red blood cells, 3 mL of blood was diluted in 4 mL of FC2 filtration buffer (ScreenCell). After 8 min of incubation at room temperature, 7 mL of diluted sample was added into device tank and filtered under a pressure gradient using a vacutainer tube. After washing with PBS to remove red blood cells debris, the filter was left on absorbing paper to dry at room temperature and then stored at −20°C. The filtration was carried out in duplicate and completed within 3 min.
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4

CTC Enrichment and Enumeration Protocol

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The workflow starts by processing blood samples through the CellSearch® system (Menarini Silicon Biosystems, Bologna, Italy) in order to enrich and enumerate EpCAMhigh CTCs [27 (link)]. In order to reduce the possible presence of skin contaminating cells, first milliliters of drawn blood samples are discarded and only following 7.5 mL of blood are processed through the CellSearch®.
After analysis, CTCs were stored in CellSearch® cartridges at 4 °C in the dark and were micromanipulated within one week [32 (link)].
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5

CTC Identification Using CellSearch Technology

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For CTC identification, we used Cellsearch® (Janssen Diagnostics, Raritan, NJ/Menarini Silicon Biosystems, Inc, Florence, Italy) technology following the standard operating procedures. Briefly, CTCs from two 7.5 ml CellSave tubes per visit were subjected to EpCAM-based ferrofluid selection, immunostaining, and image analysis, taking care to exclude apoptotic cells from CTC analysis in all samples [42 (link),43 (link)]. One CellSave tube was used to identify patients with cytokeratin-positive (CK+), CD45-, and HER2- CTCs using phycoerythrin-conjugated antibodies recognizing epithelial cell-specific CKs (predominantly cytokeratins 8, 18, and 19), allophycocyanin (APC)-conjugated antibody directed against the white blood cell marker CD45, and 6-diamidino-2-phenylindole (DAPI) to stain nuclei. For HER2 immunodetection, we used the anti-Her2/neu antibody in the Cellsearch® protocol (Menarini Silicon Biosystems) and determined HER2+ versus HER2- status as described before [44 (link)]. The second CellSave tube was engaged for the EpCAM-based selection and identification of CK+ and CD45- CTCs as before. However, the HER2-specific antibody was replaced by Alexa Fluor 488 (AF488)-conjugated anti-53BP1 antibody (NB100-304AF488, 1:50, Novus Biologicals, Centennial, CO, USA).
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6

Predicting Abiraterone and Enzalutamide Outcomes with Baseline AR-V7 in CTCs

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This prospective, multicenter study evaluated the ability of baseline (pretreatment) AR-V7 status in CTCs to predict treatment outcomes with abiraterone or enzalutamide. All the authors vouch for the completeness and integrity of the data and for the fidelity of the study to the clinical protocol (Data Supplement). Peripheral blood samples for analysis of CTCs were obtained from eligible patients at prespecified time points: baseline and at the time of clinical, radiographic, or biochemical progression. CELLSEARCH (Menarini Silicon Biosystems, Bryn Athyn, PA) CTC enumeration was performed at these time points on all patients and processed in a College of American Pathologists/Clinical Laboratory Improvement Amendments–approved central laboratory.17 (link),20 (link) Treatment selection was at the discretion of the treating physician without awareness of AR-V7 status. Laboratory investigators were blinded to the clinical information and patient outcomes. All data sets were separately sent to the study statistician (S.H.) who unblinded the data after the database was locked.
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7

Isolation and Characterization of PBMCs

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Peripheral blood mononuclear cells (PBMCs) were isolated using red blood cell lysis buffer (154 mm NH4Cl, 10 mm KHCO3, and 0.1 mm EDTA) either from patient blood (8 mL), CDX blood (500‐800 μL), or BM (Vishnoi et al., 2018). PBMCs were stained with antibodies for respective markers and loaded to FACSAria III flow cytometer (BD Biosciences, San Jose, CA, USA) for multiparametric selection. All sorted‐cell population were collected in 10% Dulbecco's modified Eagle's medium‐F12 media + 90% 1× PBS (both from Gibco, Dún Laoghaire, Dublin, Ireland) for downstream interrogation. FACS data were analyzed by software flowjo ver 10 (Ashland, OR, USA), LLC. In addition, CTC enumeration by CellSearch™ (Menarini Silicon Biosystems) was performed using mice blood (500 μL) spiked with blood (7 mL) from healthy donors, according to the user‐defined CellSearch™ platform and CellSearch™ Circulating Epithelial Cell Kit [Menarini Silicon Biosystems (Huntingdon Valley, PA, USA); the definition of CTC by Federal Drug Administration (FDA)‐cleared CellSearch™ platform is epithelial cell adhesion molecule (EpCAM)+/cytokeratin (CK)+/DAPI+ but CD45‐ cell]. Fluorescent CTC images along with DAPI were scanned and enumerated by an automated CellBrowser™ software (Menarini Silicon Biosystems), following the manufacturer's guidelines.
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8

Microfluidic Chip Performance Evaluation

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The performance of the straight microfluidic chip was assessed using HNC cell lines Fadu (ATCC®HTB43TM), 2A3 (ATCC®CRL3212TM) and CAL27 (CRL®2095 TM) sourced from the American Type Culture Collection (ATCC, Manassas, VA, USA). Cells were cultured under standard conditions in humidified incubators at 37 °C, 5% CO2 in RPMI 1640-Glutamax (Life Technologies, Inc., Carlsbad, CA, USA) supplemented with 10% foetal bovine serum (FBS) and 1% Penicillin/Streptomycin. Cells were lifted using Tryple Express reagent (ThermoFisher Scientific, Waltham, MA, USA), resuspended in media and gently mixed on a shaker prior to experiments. Cell lines for spiking and recovery experiments were labelled with CellTracker™ (Life Technologies, Inc., Carlsbad, CA, USA) as per manufacturer’s instructions. Cell line authenticity was confirmed by short tandom repeat (STR) profiling with GenePrint® 10 system (Promega, Madison, WI, USA) by the Genomic Research Centre (/IHBI/QUT). Unlabelled spike-in cells were stained with the CellSearch (Menarini Silicon Biosystems, Bologna, Italy) antibody cocktail targeting cytokeratin-8,18,19, CD45 and DAPI.
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9

CellSearch CTC Enumeration Protocol

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Blood samples were collected on CellSave® tubes and run with CellSearch (Menarini Silicon Biosystems, Huntingdon Valley, PA) using the CTC kit (Menarini) according to the manufacturer’s instructions and training. The analysis an aliquot of the DLA product containing 2 × 108 WBC was diluted to a final volume of 8 ml with CellSearch CTC Kit Dilution Buffer (Menarini) stored at room temperature (RT) and transferred into a CellSave® tube containing CellSave preservative reagent (Menarini). The sample was processed using the CellTracks Autoprep system using the CTC kit. The cartridge from the DLA product was scanned using the CellTracks analyzer II.
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10

Enumeration of Circulating Tumor Cells

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CTCs were enumerated using CellSearch (Menarini Silicon Biosystems, Bologna, Italy) as previously reported [28 (link)].
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