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8 protocols using tiam1

1

Comprehensive Western Blot Analysis

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Western blot assay was performed as previously described.24 (link) The following primary antibodies were used: Tiam1 (Santa Cruz Biotechnology Inc.); vimentin, Snail, Slug, MMP-2, VEGF, and VEGFA (Abcam); E-cadherin and ZO-1 (Cell Signaling Technology); β-Actin (Zhongshan).
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2

Immunoblot Analysis of Epithelial-Mesenchymal Markers

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Protein expression was assessed by immunoblot analysis of cell lysates (20–60 μg) in RIPA buffer in the presence of mouse antibodies to T lymphoma invasion and metastasis 1 (Tiam1), E-cadherin, β-catenin, Vimentin, β-actin (1 : 500; Santa Cruz, CA, USA); and rabbit antibodies to p-Akt (Ser473), p-Akt (Thr308), AKT, p44/42 mitogen-activated protein kinase (MAPK) (extracellular signal–regulated kinase (ERK)1/2), p-p44/42 MAPK (ERK1/2) (1 : 1000; CST, Danvers, MA, USA); and T-complex polypeptide 1 subunit beta (CCT2; 1 : 500, Abcam, Cambridge, UK).
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3

Western Blot Analysis of EMT Markers

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The cells were collected in cell lysis buffer. Protein samples were separated on 6%–8% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred to polyvinylidene fluoride membranes (Immobilon P; EMD Millipore, Bedford, MA, USA). The membranes were incubated with primary antibodies at 4°C overnight, including Tiam1 (1:1,000; Santa Cruz Biotechnology Inc.), E-cadherin (1:1,000; CST, Bos-ton, MA, USA), Snail (1:1,000; CST), Slug (1:1,000; CST), Vimentin (1:1,000; CST), β-actin (1:1,000; Santa Cruz Biotechnology Inc.), followed by incubation with the corresponding secondary antibodies. Finally, the signals were visualized with the enhanced chemiluminescence substrate.
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4

Antibodies and Reagents for Cell Signaling

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Antibodies to RhoA, S6K, TSC2, p190RhoGAP, TIAM1, IQGAP, HA-Tag, and Myc-Tag were purchased from Santa Cruz and antibodies to actin, Flag, and Phospho-70S6K were from Life Sciences. Anti-ANDV Gn monoclonal antibody was purchased from United States Biologicals. Anti-N-protein polyclonal rabbit sera made to NY-1V N protein was previously described (25 (link), 26 (link)), and RhoA-glutathione S-transferase (GST) activation assays were performed with GST-Rhotekin-RBD from Cytoskeleton Inc. Bradykinin was purchased from Sigma, and fasudil and Y27632 were purchased from Selleck Chemicals.
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5

Immunohistochemistry and Western Blot Analyses

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Antibodies against RASAL2 (Rabbit, Abcam, Cambridge, UK; Mouse, Santa Cruz Biotechnology, CA, USA; Rabbit, Proteintech, Manchester, UK); TIAM1 (Mouse, Santa Cruz Biotechnology, CA, USA; Sheep, R&D Systems, MN, USA); Ubiquitin, p-YAP1 and YAP1 (Rabbit, Abcam, Cambridge, UK); E-cadherin, Vimentin, MMP2 and Claudin1 (Rabbit, Cell Signaling Technology, Danvers, Ma, USA); β-actin and GAPDH (Mouse, Proteintech, Manchester, UK) were used for immunohistochemistry and western blot analyses.
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6

Comprehensive Protein Profiling for Cell Biology

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The following primary antibodies were used: α-tubulin (1:5,000; 9E10; Sigma-Aldrich), Flag (1:1,000; F7425; Sigma-Aldrich), RhoG (1:500; SAB4501718; Sigma-Aldrich), RhoA (1:1,000; 26C4; Sigma-Aldrich), RhoB (1:1,000; 119; Sigma-Aldrich), Rac1 (1:1,000; ab33186; Abcam), Rac3 (1:1,000; ab124943; Abcam), Cdc42 (1:500; ab41429; Abcam), HA (1:1,000; 3F10; Roche), GFP (1:1,000; Takara Bio Inc.), Tiam1 (1:500; C-16; Santa Cruz Biotechnology, Inc.), and Tiam2 (1:1,000; P17; Santa Cruz Biotechnology, Inc.). All secondary antibodies were purchased from Jackson ImmunoResearch Laboratories, Inc. HRP-coupled secondary antibodies were used for Western blots, and fluorescently labeled secondary antibodies were used for immunostaining.
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7

Hippocampal Protein Extraction and Analysis

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Each gram of hippocampi were homogenized with 30 µl cocktail protease inhibitor (Roche Molecular Biochemicals, Germany) and 3 ml RIPA buffer (US Biological, USA). After centrifugation at 12000 rpm (4 •C), the supernatant was collected and stored at -20 •C. BCA assay and spectrophotometry were used to assess the total protein concentration. The supernatant sample (50µg of protein) was separated by 10% SDS-PAGE and transferred to PVDF membrane (Millipore Inc., Darmstadt, Germany). After blocking with 5% skim milk for 2 hours, the membrane was incubated with primary antibody overnight: Rac1 (1:500, sc-514583, Santa Cruz Biotechnology), Tiam1 (1:500, sc-393315, Santa Cruz Biotechnology), α-chimaerin (1:500, sc-365985, Santa Cruz Biotechnology), Bcr (1:500, sc-104, Santa Cruz Biotechnology), GluR-1 (1:500, sc-13152, Santa Cruz Biotechnology), Synapsin 1(1:500, ab254349, Abcam), and PSD-95 (1:500, sc-32290, Santa Cruz Biotechnology). The speci city of these primary antibodies has been veri ed (Mao et Tsai et al. 2012 (link)). The membrane was incubated with a mixture of anti-rabbit IgG (Golden Bridge, Zhongshan, China) and horseradish peroxidase (HRP) for 1 hour at room temperature. Quantity One software (Bio-Rad, USA) was used for quantitative analysis.
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8

Protein Expression Analysis in NPC Cells

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The NPC cells were harvested and washed twice with phosphatebuffered saline (PBS). The protein concentration of cell lysate was determined using the Pierce BCA protein assay kit (Thermo Fisher Scienti c, China). 30 mg of proteins were loaded on premade 8-15% SDS polyacrylamide gel for separation and then electrotransferred onto a nitrocellulose membrane. The blots were incubated in PBS buffer with 5% defat milk and 0.02% Teween-20 at room temperature for 1 h before primary antibody incubation overnight at 4C. The antibodies including β-catenin, β-actin, MMP-7, Fibulin-3, Tiam1, E-cadherin, Snail, Slug, Vimentin were obtained from Santa Cruz Biotechnology Inc., US and applied with 1:1000 dilution. The SuperSignal West Pico Chemiluminescent Substrate (Thermo Fisher Scienti c, China) was used for visualization of immunoreactive proteins.
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