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31 protocols using sb202190

1

Astrocyte Signaling Pathway Modulation

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For a different group of experiments, second generation astrocytes were divided into untreated, SB202190 and DES + SB202190 groups. Cells were seeded at a density of 1×105 cells/ml in DMEM/F12. Cells in the SB202190 group were incubated at 37°C for 48 h with cell culture medium containing the p38 signal pathway inhibitor SB202190 (Cell Signaling Technology, Inc.) at a final concentration of 30 µmol/l. Cells in the DES + SB202190 group were treated with p38 signal pathway inhibitor SB202190 at a final concentration of 30 µmol/l and 15 nM PP2A activator DES at 37°C for 48 h, while the untreated group received no treatment. The levels of p38, p-p38, MMP-2 and MMP-9 were detected by western blotting and migration was assessed by a Transwell assay.
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2

Measuring CRC Cell Gelatinolytic Activity

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CRC cells were incubated with PMPs as described above, and 50 × 103 cells per ml were added to FITC-labelled gelatine-coated wells (0.1 mg/ml) and incubated for 24 h. The gelatinolytic activity of MMP-2 and MMP-9 was measured as green fluorescence derived from degraded gelatine (Additional file 2: Supplementary Methods). In another set of experiments, MMP-2 and MMP-9 activity was measured as CRC cell migration through 0.2% gelatin-coated filters in the Boyden chambers as described above (Additional file 2: Supplementary Methods). The gelatinolytic properties of CRC cell were blocked by the appropriate inhibitors of MMP-2 (ARP101) or MMP-9 (CTK8G1150) at a final concentration of 20 µM or by the specific inhibitor of p38MAPK (SB202190, Cell Signaling Technology) at a final concentration of 5 µM.
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3

Human Myeloma and Mesenchymal Stem Cell Culture

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The human multiple myeloma cell lines (RPMI-8226 and U266) were purchased from American Type Culture Collection (Manassas, VA, USA). The human bone marrow-mesenchymal stem cells were obtained from Shanghai Cell Institute (Shanghai, China). The cells were cultured at 37°C in a water-saturated atmosphere of 95% air and 5% CO2 in RPMI-1640 supplemented with 10% heat-inactivated Fetal Bovine Serum (FBS) (Gibco, Carlsbad, CA, USA), 100 U/ml penicillin and 100 µg/ml streptomycin (Amresco, Solon, OH, USA) or human bone marrow mesenchymal stem cell complete medium (Guangzhou, China). For treatment with the P38 inhibitor SB202190, the cells were seeded at 2×105 cells/well in a 24-well plate, and incubated overnight at 37°C. Then, the medium was replaced with fresh medium supplemented with 100 µM of SB202190 (Cell Signaling Technology, Danvers, MA, USA), and the cells were cultured for an additional 4 h. Cells were harvested for further studies.
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4

Synergistic anti-cancer effects of EZH2 and p38 inhibitors

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The EZH2 methyltransferase inhibitors GSK-343 (Sigma-Aldrich, #SML0766) and EPZ-6438 (Selleckchem, #S7128), and p38 inhibitor SB202190 (Cell Signaling #8158) were used. MDA-MB-231 and SUM149 cells were treated with GSK-343 (1, 2, 3, 5 and 8 μM) and SB202190 (5, 10, 20, 30 and 40 μM) or a combination of GSK-343 and SB202190 for 96 h respectively. Cell viability measurements were used for calculating IC50. Data were analyzed using GraphPad Prism 7 using nonlinear regression. Drug-drug interactions were quantified via SynergyFinder 2.0 (https://synergyfinder.fimm.fi) (Ianevski et al., 2017 (link)). In this method, a synergy score less than −10 denotes an antagonistic interaction, from −10 to 10 an additive interaction, and larger than 10 a synergistic interaction. Synergy summary scores were calculated across all the tested concentration combinations. To quantify the degree of drug synergy it has been used the Zero interaction potency (ZIP) model (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4759128). Based on these assays, we selected doses within the synergy range of the combination treatment for functional studies.
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5

Endothelial Cell Inflammatory Response

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LPS was purchased from Sigma-Aldrich. Recombinant human VEGF, IL-1β and TNF-α were purchased from Cell Signaling Technology. Rabbit monoclonal antibodies against VE-cadherin, phospho-p38 (Thr180/Tyr182), p38, phospho-Src, Src, phospho-ERK1/2, ERK1/2, ICAM-1 and VCAM-1 were purchased from Cell Signaling Technology. Inhibitor of p38, SB202190, was purchased from Cell Signaling Technology. Rabbit polyclonal antibodies against 5-MTP was purchased from Abcam. Horseradish peroxidase-conjugated anti-mouse and anti-rabbit IgG were purchased from Santa Cruz.
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6

Investigating MAPK Inhibitors on Cell Differentiation and Mineralization

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To investigate the effects of the inhibitors on cell differentiation, cells were seeded at 2 × 104 cells/well in a 1 M RGD-3-coated 12-well microplate. To check the effects of the inhibitor on cell mineralization, cells were seeded at 2 × 104 cells/well in a 1 M RGD-3-coated 6-well microplate. Cells were challenged with 20 μM of one of three MAPK pathway inhibitors on day 6 in serum-free DMEM for 2 h, SP600125 (Cell Signaling Technology, Danvers, MA, USA) for c-Jun N-terminal kinase (JNK), SB202190 (Cell Signaling Technology) for p38 and PD98059 (Cell Signaling Technology) for extracellular signal-regulated kinase (ERK), respectively. Then, the medium was changed to DMEM supplemented with 10% FBS, 50 units/mL penicillin and 50 μg/mL streptomycin, and 10 mM β-GP and 50 μg/mL AA were added on day 7 when the cells reached confluence. ALP activity assays were performed on days 8 and 22. ARS staining was performed on day 31.
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7

Cell Lines for Keratinocyte Research

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The non-tumorigenic immortalized human keratinocyte HaCaT cell line was obtained from Dr. Nancy Bigley (Wright State University), while the tumorigenic H-Ras transformed HaCaT II-4 cells were obtained from by Dr. Nancy Colburn (National Cancer Institute). The SCC cell line A431 was obtained from ATCC (Manassas, VA, USA). The three cell lines were maintained in Dulbecco's modified Eagle's medium supplemented with 8% fetal bovine serum and 250 U penicillin and 250 μg streptomycin. Neonatal human epidermal keratinocytes were maintained in KGM-Gold media as per manufacturer's instructions (Lonza, Walkersville, MD, USA). The Akt inhibitor MK2206 and the p38 inhibitor BIRB-796 were purchased from Selleckchem (Houston, TX, USA). The p38 inhibitor SB202190 was purchased from Cell Signaling Technology (Danvers, MA, USA). VD3 was maintained as a 100 μM a stock in 100% ethanol (Cat # 17936, Sigma-Aldrich, St. Louis, MO, USA). VD3 treatment were carried out in Dulbecco's modified Eagle's medium supplemented with 8% Charcoal-striped fetal bovine serum and 250 U penicillin and 250 μg streptomycin with a final EtOH concentration of 0.01%.
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8

Compound Acquisition for Cell Experiments

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Crizotinib (PF-02341066) was obtained from ShangHai Biochempartner; cabozantinib (XL184), ceritinib (LDK378), lorlatinib (PF-06463922), trametinib (GSK1120212) from ActiveBiochem; foretinib from AdooQ Bioscience; brigatinib from Sellek; radicicol and rotenone from Cayman Chemical; 17-AAG (17-N-Allylamino-17-demethoxygeldanamycin) and GDC-0941 from LC Laboratories; TAE684 from ChemieTek; SB202190 from Cell Signaling Technology; SB239063 from Sigma; and cycloheximide and doxycycline hyclate from Nacalai Tesque. Each compound was prepared in dimethyl sulfoxide (DMSO), ethanol (WAKO) or distilled water for cell culture experiments.
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9

LLC-PK1 cells treated with CTS and inhibitors

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In 24-well plates, 1–2 × 104 LLC-PK1 cells/well were treated with 1, 10 or 100 nM CTS for 24, 48, and 72 h. In order to investigate the involvement of intracellular signaling pathways, 100 nM CTS were incubated with or without inhibitors of Src (SU6656, 10 μM; Sigma-Aldrich, St. Louis, MO, USA), ERK1/2-MEK1/2 (U0126, 10 μM; Cell Signaling Technology, Danvers, MA, USA), PI3K (LY294002, 5 μM; Cell Signaling Technology, Danvers, MA, USA), p38 (SB202190, 10 μM; Cell Signaling Technology, Danvers, MA, USA), JNK1/2 (SP600125, 1.5 μM; Cell Signaling Technology, Danvers, MA, USA), or GSK-3β (BIO, 0.5, 1, and 5 μM; Sigma-Aldrich, St. Louis, MO, USA) for 72 h. For MβCD (Sigma-Aldrich, St. Louis, MO, USA) assay, cells were pretreated with 10 mM MβCD for 30 min and then 1 mM MβCD + 100 nM TCB in 2.5% FBS for 72 h. At these time points, two wells from each group were trypsinized and the number of Trypan blue-viable cells was counted in Neubauer chamber (hemocytometer).
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10

IPEC-J2 Intestinal Cell Culture Protocol

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The IPEC-J2 intestinal porcine enterocyte cell line (DSMZ, Braunschweig, Germany) was maintained, as previously described [11 (link)]. Moreover, the cells were cultured in high-glucose Dulbecco’s Modified Eagle’s Medium supplemented with 5% fetal bovine serum, 1% insulin–transferrin–selenium-X, and 1% (v/v) penicillin–streptomycin [55 (link)]. The cells were maintained at 37 °C in a humidified atmosphere of 5% CO2. The IPEC-J2 cells were incubated with different treatments, including recombinant HBEGF (Mybiosource, San Diego, CA, USA), LY2944002 (Cell Signaling Technology, Danvers, MA, USA), SB202190 (Cell Signaling Technology, USA), and the AMPK inhibitor (dorsomorphin dihydrochloride; Santa Cruz Biotechnology, Dallas, TX, USA) at different intervals, as indicated in the figure legends.
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