The largest database of trusted experimental protocols

7 protocols using rpn1231v

1

Immunoblotting of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were separated by SDS-PAGE and transferred onto nitrocellulose membranes. The membranes were blocked in TBS containing 5 mg/mL non-fat milk and 1% Tween 20 for 1 hour at room temperature. Blots were probed for FLAG (1:5000; F1804; Sigma-Aldrich), β-tubulin (1:5000; E7; DSHB at the University of Iowa), H3K27ac (1:1000; 07-360; EMD Millipore) and Streptavidin conjugated to HRP (1:5000; RPN1231V; GE Healthcare). Detection on film was performed by chemiluminescence using the LumiGLO reagent (Cell Signaling Technology; #7003; 1:20).
+ Open protocol
+ Expand
2

ELISA for AAV Capsid Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
ELISA plates were coated with A20 anti-AAV2 antibody (0.1 μg/well) in bicarbonate buffer overnight. Plates were washed twice with PBS, then blocked blocking solution (Thermo, Casein blocking solution in TBS: Blocker Casein in TBS, 100 mL, 1% (w/v) casein (Hammarsten grade) in 25 mM Tris, 150 mM NaCl, pH 7.4 containing Kathon Anti-microbial Agent, cat no: 37583) for 1 h at 37 °C. In total, 1 × 109 and 1 × 1010 vector genomes of AAV-λ465 and AAV-CBA-FLuc were added to the plate in 100 μL volume and plates were incubated for 90 min at 37 °C. After washing three times with PBS-Tween, samples were incubated in the presence of a 1:20 dilution of primary antibody (Anti-AAV2, intact particles, clone A20, BIOTIN, American Research Products, Waltham, MA; Product Code: 03-61055B) in 50 μL volume. After washing three times with PBS-Tween, 1:2000 streptavidin-HRP was added (GE Healthcare, RPN1231V) and plates were incubated for 1 h at 37 °C. After the addition of TMB substrate, and H2SO4, absorbance was read at 450 nm. Samples were run in duplicates.
+ Open protocol
+ Expand
3

Immunohistochemical Detection of T Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains were removed from deeply anesthetized and exsanguinated mice, frozen in liquid nitrogen and sectioned in a cryostat. Parallel brain sections (20 μm thick) were fixed 45 min in 4% paraformaldehyde for CD4 immunostaining or 4 min in 4% phosphate buffered formaline, pH 7.4, followed by 2 min in 50%, 100%, and 50% acetone, respectively, and finally air dried for CD8a immunostaining. Sections were then rinsed in 0.5 % triton X-100 diluted in 0.05M trizma base buffered saline (TBS+T), pH 7.4, and incubated with 10% fetal calf serum (FBS) in TBS+T before incubation overnight at 4°C with purified rat-anti-mouse CD4 IgG2a (2.5 μg/mL) (553647, BD Pharmingen) or purified rat-anti-mouse CD8a IgGa (7 μg/mL) (MCA1108GT, AbDSerotec) diluted in 10% FCS in TBS+T. Parallel sections were incubated with rat IgG2a isotype control (2.5–7 μg/mL) (BD Pharmingen). After a rinse in TBS+T, endogenous peroxidase activity was blocked with 1.9% H2O2 in TBS, and sections were rinsed in TBS+T before and after incubation with biotinylated goat anti-rat IgG antibody (5 μg/mL) (BA9400, Vector Laboratories Inc) and HRP-conjugated streptavidin (1:300) (RPN1231V, GE Healthcare), respectively, diluted in 10% FCS in TBS+T. After a final rinse in TBS+T, the colour signal was developed in 0.05% 3.30-diaminobenzidine tetrahydrochloride and 0.003% H2O2 in TBS. Finally, sections were coverslipped with Depex.
+ Open protocol
+ Expand
4

Optimized Antibody Detection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The secondary Abs used for the experiments were: HRP-conjugated donkey anti-rabbit Ab (NA934V, GE Healthcare, Broendby, Denmark), HRP-conjugated rabbit anti-mouse pAb (P0260, Dako), HRP-conjugated streptavidin (RPN1231V, GE healthcare), FITC-conjugated goat anti-rabbit pAb (F1262, Sigma-Aldrich, Copenhagen, Denmark), and FITC-conjugated goat anti-mouse pAb (F0479, Dako).
+ Open protocol
+ Expand
5

Western Blot Analysis of Fosl1 Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with PBS and lysed in 2× Laemmli sample buffer (Bio-Rad). Cell lysates were boiled at 100 °C for 15 min and centrifuged prior to loading. Proteins were separated on 4–20% gradient acrylamide gels (Bio-Rad) and transferred onto PVDF membranes using Trans-Blot® Turbo Transfer Starter System (Bio-Rad). After transfer, membranes were blocked with 5% BSA (Sigma) in TBST (20 mM Tris-HCl, pH 7.6, 13 mM NaCl, and 0.1% Tween-20) for an hour and incubated with primary antibody (or streptavidin-HRP) at 4 °C overnight. Membranes were then washed with TBST and incubated with secondary antibody for 1 h at room temperature. Antigens were detected using ECL reagents (GE Healthcare Amersham ECL prime) with Bio-Rad Molecular Imager® ChemiDoc XRS+ system. The antibodies used are streptavidin-HRP (1:2000, RPN1231V, GE Healthcare Life Sciences), anti-Fosl1 (1:1000, sc-183, Santa Cruz Biotechnology), and anti-β-actin (1:20,000, ab20272, Abcam).
+ Open protocol
+ Expand
6

Purification and Detection of BirA Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues were collected, pulverized under liquid nitrogen using mortar and pestle, and extracted in titin sample buffer (8 M urea, 2 M thiourea, 3% SDS, 0.05 M Tris-HCl, 0.03% bromophenol blue, 75 mM dithiothreitol (DTT), pH 6.8) for 30 min on ice. Debris was removed by centrifugation. Proteins were separated on agarose gels and blotted on polyvinylidene difluoride membranes. Primary BirA antibody were purchased from BioFront Technologies (Chicken Polyclonal Ab to Escherichia coli Biotin Ligase/BirA; BID-CP-100, 1 : 5000) and the Streptavidin–horseradish peroxidase (HRP) conjugate from GE Healthcare (RPN1231V, 1 : 1000). The secondary HRP-conjugated antibody (ECL Rabbit IgG, HRP-linked whole Ab (from donkey) Amersham NA934V, 1 : 5000) was detected by chemiluminescence staining with ECL (Supersignal West Femto Chemiluminescent Substrate; Pierce Chemical, Co.).
+ Open protocol
+ Expand
7

Western Blot Analysis of Fosl1 Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were washed with PBS and lysed in 2× Laemmli sample buffer (Bio-Rad). Cell lysates were boiled at 100 °C for 15 min and centrifuged prior to loading. Proteins were separated on 4–20% gradient acrylamide gels (Bio-Rad) and transferred onto PVDF membranes using Trans-Blot® Turbo Transfer Starter System (Bio-Rad). After transfer, membranes were blocked with 5% BSA (Sigma) in TBST (20 mM Tris-HCl, pH 7.6, 13 mM NaCl, and 0.1% Tween-20) for an hour and incubated with primary antibody (or streptavidin-HRP) at 4 °C overnight. Membranes were then washed with TBST and incubated with secondary antibody for 1 h at room temperature. Antigens were detected using ECL reagents (GE Healthcare Amersham ECL prime) with Bio-Rad Molecular Imager® ChemiDoc XRS+ system. The antibodies used are streptavidin-HRP (1:2000, RPN1231V, GE Healthcare Life Sciences), anti-Fosl1 (1:1000, sc-183, Santa Cruz Biotechnology), and anti-β-actin (1:20,000, ab20272, Abcam).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!