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13 protocols using phospho jnk

1

Western Blot Analysis of Protein Expression in BMDCs

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The expression of proteins of interest in BMDCs was analyzed using western blotting as previously described 1 (link). The following primary antibodies were used: anti-TGR5 (Abcam, Cambridge, MA, USA), FXR (Abcam), Bax (Abcam), BCL-2 (Abcam), caspase3 (Abcam), cleaved-caspase3 (Abcam), LC3 (Abcam), Belin1(Abcam), P62 (Abcam), P65 (Abcam), Ikbα (Abcam), ERK1/2 (Santa Cruz), P38 (Abcam), JNK (Abcam), phospho-P65 (CST), phospho-Ikbα (Abcam), phospho-ERK1/2 (Santa Cruz), phospho-P38 (Abcam), phospho-JNK (Abcam), and β-actin (Abcam).
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2

Protein Extraction and Western Blot Analysis

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The total proteins of tissues and cell samples were extracted using a radioimmunoprecipitation assay buffer (Solarbio. Equal amounts of protein (20 μg) were separated by sodium dodecyl sulfate–, Beijing, China)polyacrylamide gel electrophoresis and then transferred to polyvinylidene fluoride membranes (Millipore, MA, USA). After blocking with 5% bovine serum in TBST, the membranes and corresponding primary antibodies were incubated overnight in a shaker at 4°C. The primary antibodies used were as follows: anti-GAPDH (1:10,000, ProteinTech, Wuhan, China), anti-HSF2BP (1:1000, Abcam, USA), ERK (1:500, Abcam, USA), phospho-ERK (1:500, Abcam, USA), JNK (1:1,000, Abcam, USA), phospho-JNK (1:1,000, Abcam, USA), p38 (1:1,000, Abcam, USA), and phospho-p38 (1:1,000, Abcam, USA). After incubation with horseradish peroxidase-conjugated secondary antibodies (1:10,000, ProteinTech, Wuhan, China) at room temperature for 1 h, the membranes were visualized using the enhanced chemiluminescence method (Thermo, MA, USA) with a chemiluminescent detection system (Tanon, Shanghai, China).
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Western Blot Analysis of Lung Tissue

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Right lung (40 mg) was cut off. Then, 400 μL of CER I and 4 μL of Halt™ Protease and Phosphatase Inhibitor Cocktail (Pierce Biotechnology Inc., Rockford, USA) homogenate were added to the lung tissue. The mixture was incubated on ice for 10 min followed by addition of precooled (4°C) CER II (22 μL). The supernatant was collected by centrifugation for 10 min at 16000 rpm. Protein centration was measured by BCA method. Equal amounts of proteins were loaded in a 12% SDS-PAGE gel. After blotting onto PVDF membrane, samples were incubated with respective primary antibodies: phospho-ERK, C-jun (Cell Signaling Technology, Boston, MA), phospho-p38, phospho-JNK, ERK, p38, JNK, C-fos, γ-GCS-h (Abcam, Cambridge, UK), and β-actin (1 : 1000 dilution) and were incubated at 4°C overnight. Then, the respective secondary antibodies conjugated to HRP were incubated for 1 h, followed by three-time washing. The membrane was then incubated with ECL (Millipore, MA, USA) for luminescence generation. The image and the gray level were analyzed by Alpha Innotech and Adobe software. Protein expression level was evaluated by the β-actin ratio.
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4

Quantitative Western Blot Analysis

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NOX4 (Abcam, Cambridge, MA, USA), NOX2 (Abcam), p22phox (Santa Cruz Biotechnology), p47phox (Santa Cruz Biotechnology), Rac1 (Abcam), phospho-ERK1/2 (Cell Signaling Technology (CST), Danvers, MA, USA), ERK1/2 (CST), phospho-p38 (CST), p38 (CST), phospho-JNK (CST), JNK (CST), PCNA (Abcam) and β-actin (Sigma) protein levels were determined by western blot analysis as described previously53 (link).
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5

Western Blot Analysis of Protein Expression

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Western blotting was performed essentially as previously described (17 (link)). The expression of CD137 (1:500, rat, Abcam, Cambridge, UK), ASK1 (1:2,000, rabbit, Abcam), phospho-ASK1 [1:500, rabbit, Cell Signaling Technology (CST), Danvers, MA, USA], p38 (1:1,000, rabbit, CST), phospho-p38 (1:1,000, rabbit, CST), JNK (1:1,000, rabbit, CST), phospho-JNK (1:1,000, rabbit, CST), IκBα (1:1,000, rabbit, CST), phospho-IκBα (1:1,000, rabbit, CST), MMP9 (1:1,000, rabbit, Abcam), MMP12 (1:2,000, rabbit, Abcam), and β-actin (1:1,000, rabbit, CST) in MH-S cells or lung tissues was measured by western blot. Protein expression was normalized to β-actin.
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Western Blot Analysis of Cellular Proteins

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Proteins were extracted from cells using Nucleospin RNA/protein kit (Macherey–Nagel). Equivalent amounts of total cell lysate were subjected to SDS-PAGE. Western blot was done with antibodies for β-actin (1:5000; Abcam), cytokeratin 14 (1:1000, Abcam), catalase (1:2000; Abcam), SOD 1 (1:2000; Abcam), GPx (1:1000; Abcam), Erk (1:1000; Cell Signaling Technology, MA, USA), phospho-Erk (1:2000; Cell Signaling Technology), JNK (1:1000; Cell Signaling Technology), phospho-JNK (1:2000; Abcam), c-Jun (1:1000; Cell Signaling Technology), phospho-c-Jun (1:1000; Cell Signaling Technology), p38 (1:1000; Cell Signaling Technology), phospho-p38 (1:1000; Cell Signaling Technology), Akt (1:5000; Cell Signaling Technology), phospho-Akt (1:1000; Cell Signaling Technology), or GAPDH (1:10,000; AbFrontier, Seoul, Korea). Bound primary antibodies were detected with conjugated secondary antibodies, observed by enhanced chemiluminescence using Clarity™ Western ECL (Bio-Rad Laboratories, Hercules, CA, USA), photographed and quantified with Gel-doc Image Lab (Bio-Rad Laboratories).
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7

Western Blot Analysis of Signaling Proteins

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Lysates extracted from tissues and cultured cells were separated by SDS-PAGE and proteins were transferred to PVDF membranes. Membranes were incubated after blocking with 5% milk by using the following primary antibodies: anti-A20 (1:1,000, CST), ERK1/2(1:500, Santa Cruz), phospho-ERK1/2 (1:500, Santa Cruz), JNK(1:1,000, Abcam), phospho-JNK (1:1,000, Abcam), P38(1:1,000, Abcam), phospho-P38 (1:1,000, Abcam), P65 (1:1,000, Abcam), phospho- P65 (1:1,000, CST), Ikb-α (Abcam), phospho-Ikb-α (Abcam), ZO-1(1:1,000, Invitrogen), Occludin (1:2,000, Abcam), GAPDH (1:2,000, Abcam) at 4°C overnight. Then, the membranes were washed and incubated with secondary antibodies at room temperature. The membranes were visualized using the Western Bright™ ECL kit (Advansta, CA, USA).
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8

Molecular Mechanisms of EMT Regulation

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Antibodies used in this study were anti-CBX1, E-Cadherin, N-Cadherin, Vimentin, Snail, pAKT, AKT, Twist, Slug, Zeb1, p65, phospho-p65, ERK, phospho-ERK, JNK, phospho-JNK, SMAD3, phospho-SMAD3, IGF-1R, IGF-1, EGFR, VEGFR1, FGFR1, KIT, PDGFR-α, TGFβ-R1, all sourced from Abcam; and MK-2206 (an AKT inhibitor), SC-79 (an AKT activator) from Selleck.
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9

Farrerol Attenuates Kidney Injury

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Farrerol was purchased from Chengdu Pufei De Biotech Co., Ltd. (Chengdu, China). Anti-phosphorylated c-Jun NH2-terminal kinase (JNK), β-actin, and NOX4 antibodies were obtained from Sungene Biotech Co., Ltd. (Tianjin, China) and Abcam (Cambridge, MA, USA). Primary antibodies against Nrf2, Keap1, HO-1, NQO1, P53, caspase-3, Bax, Bcl2, phospho-JNK, phospho-ERK, phospho-p38, and NF-κB were purchased from Abcam (Cambridge, MA, USA) and Cell Signaling (Boston, MA, USA). Phosphatase p53 was purchased from ImmunoWay. KIM-1- and NGAL-specific antibodies were purchased from R&D Systems, and the BCA protein assay kit (Beyotime, China) was used to evaluate the protein concentrations. The cell culture medium DMEM, antibiotic-antimycotic, and trypsin-EDTA were purchased from Corning, MBI, and Biofil, respectively. Dimethyl sulfoxide (DMSO) and DCFH-DA were purchased from Sigma Chemical Co. (St. Louis, MO, USA). In addition, BUN, SCr, MDA, MPO, GSH, and SOD detection kits were obtained from Nanjing Jiancheng Bioengineering Institute (Nanjing, China).
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10

Recombinant CNTF Neuroprotection Assay

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Recombinant human CNTF was produced in Escherichia coli by our laboratory [37] . All cell culture reagents were purchased from Gibco (NY, USA). Aβ 1-42 , AG490, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) and 2, 7-dichlorodihydrofluorescein diacetate (DCFH-DA) were purchased from Sigma-Aldrich (MO, USA). The Annexin V-FITC and PI double staining kit was obtained from BD Biosciences (CA, USA). Dimethyl sulfoxide (DMSO), RNase A, PVDF membranes and the enhanced chemiluminescence (ECL) detection kit were purchased from Beyotime (Nantong, China). Antibodies against Bcl-2, Bcl-xL and β-actin were obtained from Santa Cruz Biotechnology (CA, USA). Antibodies against JAK2, STAT3, phospho-JAK2, phospho-STAT3, JNK, ERK, p38, phospho-JNK, phospho-ERK and phospho-p38 were purchased from Abcam (MA, USA). Caspase-3 and caspase-9 fluorometric assay kits were obtained from BioVision (SF, USA). All other chemicals and reagents were of analytical grade.
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