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Lipofectamine 200

Manufactured by Thermo Fisher Scientific
Sourced in United States

Lipofectamine 2000 is a transfection reagent used for the introduction of nucleic acids, such as DNA or RNA, into eukaryotic cells. It is a cationic lipid-based formulation designed to facilitate efficient and reliable delivery of genetic material into a wide range of cell types.

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30 protocols using lipofectamine 200

1

Dual-Luciferase Assay for 3'UTR Targeting

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Cell lines were forward transfected with psiCheck2-10a using Lipofectamine 200 (Thermo Fisher Scientific) according to manufacturer’s protocol. Cells were reseeded into 96 well plates 24 h (hrs) post transfection at 20.000/ well HCT116- derived cell lines and 10.000/ well RPE1 derived cell lines. Luciferase activity was monitored 48 h post transfection using the Dual-Glo® Luciferase Assay System (Promega). Renilla luciferase activity values were normalized to the Firefly luciferase activity and subsequently to the parental cell line. Statistical testing and data plotting was performed in GraphPad Prism 6.
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2

Silencing EBNA1 in GT-38 cells

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Small interfering RNAs (siRNAs) targeting the EBNA1 sequence were purchased from Dharmacon. The siRNA sequences for EBNA1 were: 3′-GGAGGTTCCAACCCGAAAT-5′. A non-silencing siRNA was used as a negative control (cat. no. D001810-01-20). One day before transfection, a total of 1×105 GT-38 cells in the logarithmic growth phase were seeded in 6-wells plates at 37°C in RPMI-1640 (10% FBS). 200 nM siRNA and 5 µl Lipofectamine 200 (Thermo Fisher Scientific, Inc.) were mixed in fresh RPMI-1640 (without FBS) and incubated for 20 min at room temperature. When the cell reached 80–90% confluence, the media was replaced with fresh RPMI-1640 (without FBS) and the mixtures was dropwise addition to cells. After 8 h, the media was replaced with fresh RPMI-1640 (supplemented with 10% FBS). At 48 h later, the cells were split for subsequent experiments. Three groups were used in the in vitro experiments, including untreated cells (Blank control group), cells transfected with non-silencing siRNA (Control siRNA group) and cells transfected with the EBNA1 siRNA (EBNA1 siRNA group).
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3

Dual-Luciferase Assay for miRNA Target Validation

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Cell lines were reverse transfected with miRCURY LNA™ miRNA Mimic or miRCURY LNA™ miRNA Mimic Negative Control (Exiqon) at 50 nM using Lipofectamine 200 (Thermo Fisher Scientific) according to manufacturers protocol. Cells were forward transfected with the pS16-wt-luc Firefly luciferase reporter construct and pRL-TK Renilla luciferase control vector 24 h post mimic transfection. Forty-eight hours post mimic transfection, cells were reseeded into 96 well plates at 20.000/ well HCT116- derived cell lines and 10.000/ well RPE1- derived cell lines. Luciferase activity was monitored 72 h post transfection using Dual-Glo® Luciferase Assay System (Promega). Starvation was performed by replacing the Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum and 1% penicillin/ streptomycin with DMEM without supplements for 3 h prior measurement of luciferase activity. Firefly luciferase activity values were normalized to Renilla luciferase activity and subsequently to the parental cell line. Statistical testing and data plotting was performed in GraphPad Prism 6.
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4

Lipofectamine-Mediated HEK293 Transfection

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HEK293 cells were transfected with Lipofectamine200 (ThermoFisher Scientific) according to the manufacturer’s instructions.
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5

METTL14 knockdown and overexpression in A549 cells

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The si-negative control (si-NC), and si-METTL14-1/2/3 were designed and synthesized by GENEray Biotechnology (Shanghai, China), as well as the pcDNA3.1(+)-METTL14 plasmid (oe-METTL14) and pcDNA3.1(+) plasmid (oe-NC) were prepared and purchased from Sangon Biotech (Shanghai, China). The methods of cell transfection were described as previously [20 (link)]. Briefly, the A549 cells in good condition were inoculated into a 24-well plate at a density of 4 × 104 cells/well, and cultured overnight. On the next day, the cell medium was changed to the serum-free medium. The A549 cells were transfected with 15 pmol si-NC or si-METTL14-1/2/3, and 1 μg pcDNA3.1(+)-METTL14 plasmid or pcDNA3.1(+) plasmid using Lipofectamine 200 (Thermo Fisher Scientific) based on the protocols of the manufacturer. After 6 h of transfection, the medium was replaced with the complete medium, and the cells continued to culture for 48 h. The total RNA was extracted from the cells with different transfection, and the expression of METTL14 was determined by western blot to assess the cell transfection efficiency.
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6

Overexpression of WTAP in rBMVECs

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The rBMVECs were acquired from Procell Life Science & Technology Co., Ltd (Wuhan, China) and were cultured in Dulbecco’s modification of Eagle’s medium (Gibco, USA), which contained 10% fetal calf serum (Gibco) and 1% penicillin/streptomycin (Gibco). The cells were stored in an incubator that was supplemented with 5% CO2 at 37°C and passed when the cells grew to 80–90% confluence.
The pcDNA3.1(+)-WTAP plasmid (oe-WTAP) and pcDNA3.1(+) plasmid (oe-NC) were prepared and synthesized by Yanzai Biotechnology (Shanghai) Co. Ltd; the cell transfection methods were the same as those reported previously [30 (link)]. The rBMVECs in good condition were harvested and inoculated into a six-well plate (6 × 105 cells/well). Following overnight incubation, the serum-free medium was replaced with the original medium, and either 2.5 μg of pcDNA3.1(+)-WTAP plasmids or pcDNA3.1(+) plasmids were transfected into the rBMVECs using Lipofectamine 200 (Thermo Fisher Scientific). After 6 h of transfection, the complete medium was added and cultured for another 48 h. The RNA and proteins were extracted from the differently treated cells, whereas the WTAP mRNA and protein expressions were assessed using RT-qPCR and western blotting, to estimate the cell transfection efficiency. The WTAP sequences are displayed in Table 1.
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7

Lentiviral Vector Production Protocol

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The lentiviral vector of interest was co-transfected with the packaging vectors pRSV-Rev, pIVS-VSV-G, and pMDL-GagPol50 (link) into HEK-293T cells grown in DMEM (Sigma) containing 10% fetal bovine serum (Life Technologies) for virus production using Lipofectamine 200 (Life Technologies). After 48 hours the supernatant was collected. Viral particles were concentrated using PEG-it (Systems Biosciences) and resuspended in PBS. Virus titer was quantified using the qPCR Lentivirus Titration Kit (Applied Biological Materials) according to the manufacturer’s instructions.
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8

Lentiviral Vector Production Protocol

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The lentiviral vector of interest was co-transfected with the packaging vectors pRSV-Rev, pIVS-VSV-G, and pMDL-GagPol50 (link) into HEK-293T cells grown in DMEM (Sigma) containing 10% fetal bovine serum (Life Technologies) for virus production using Lipofectamine 200 (Life Technologies). After 48 hours the supernatant was collected. Viral particles were concentrated using PEG-it (Systems Biosciences) and resuspended in PBS. Virus titer was quantified using the qPCR Lentivirus Titration Kit (Applied Biological Materials) according to the manufacturer’s instructions.
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9

Gankyrin Overexpression and DNA Damage Response

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U2OS cells were grown using standard cell culture conditions as described in Higashitsuji9 (link) and with the same FLAG-gankyrin overexpression vector (Agilent Technologies, Santa Clara, CA) kindly provided by Dr J. Fujita (Japan). Cells were transiently transfected with 2 μg of this construct using Lipofectamine 200 (Life Technologies) with 1 × 106 cells per transfection. Gankyrin, p53, p21 and β-actin expression levels were subsequently assessed at 24–72 h by Western blot both with and without incubation of varying concentrations of cjoc42 that had been freshly dissolved in 0.5% DMSO (final). DNA damage, where necessary, was induced with 0.2 μM etoposide treatment, 24 hours post gankyrin transfection. Control transfections were performed simultaneously using 2μg pmaxGFP expression vector (Amaxa) to determine transfection efficiency.
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10

Intracellular Trafficking in CHO and HeLa Cells

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CHO and HeLa cells were purchased from ATCC (Manassas, VA). DMEM, Advanced DMEM, DMEM/F12, Penicillin, Streptomycin, Geneticin, Lipofectamine 200 and Alexa546-conjugated transferrin were all obtained from Life Technologies (Gaithersburg, MD). pCI vectors were from Promega (Madison, WI). Fluorescent constructs were obtained from OriGene (Rockville, MD) and AddGene (Cambridge, MA). Antibodies used were LMTK2 (Rabbit monoclonal, Sigma Aldrich, St Louis MO; note the antibody recognizes a region distal to the putative di-acidic motif [22 (link), 29 (link)]), TGN46 (Rabbit Polyclonal, Abcam, Cambridge MA), EEA1 (Rabbit monoclonal, Cell Signaling, CA), PDI (Rabbit polyclonal, Santa Cruz, CA), GAPDH (rabbit polyclonal; Santa Cruz). Secondary antibodies were goat anti-rabbit IRDye 680RD conjugates (Licor, Lincoln, NE), and all images were collected on a Licor Odyssey SA imager. For immunofluorescence microscopy, labeled secondary antibodies (cy3 and alexa 488 conjugates) were from Jackson Laboratories (West Grove, PA). All other reagents were obtained from Sigma and were of reagent grade.
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