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7 protocols using fndc5

1

Molecular Markers of Metabolic Health

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The primary antibodies against p-Akt (Ser473), Akt, p-Smad2, p-Smad3, PPARγ, p-ACC1 and PGC1-α were from Cell Signaling Technology (Beverly, MA). Antibodies against F4/80, CD68, Fndc5 and UCP-1 were from Abcam (Cambridge, MA). ELISA kits for measuring irisin, IL-6 or adiponectin were from BioVision (Milpitas, CA), eBioscience (San Diego, CA) or R&D Systems (Minneapolis, MN) respectively. The recombinant proteins, irisin or myostatin were obtained from Enzo life Sciences (Farmingdale, NY) or R&D systems. The anti-myostatin peptibody (peptibody) was from Atara Biotherapeutics (Westlake Village, CA) (21 (link);22 (link)). Serum insulin concentration was measured using the Rat/Mouse Insulin ELISA kit (Millipore, Billerica, MA). Serum free fatty acid levels were measured using the NEFA C kit from Wako (Richmond, VA).
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2

Immunofluorescence Analysis of Muscle Proteins

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For immunofluorescence, 5 μm thick paraffin sections of vastus lateralis were re-hydrated and antigens were retrieved. Sections were then permeabilized with Triton X-100 0.5% in PBS for 10 minutes at RT and non-specific interactions were blocked with 10% HS in PBS for 30 minutes at RT. After washing in PBS tissues were incubated with primary antibody against FNDC5 (Abcam), ATPsynthase (Invitrogen Molecular Probes), Laminin (Santa Cruz), MyoD (Dako) and Pax7 (R&D Systems). Fluorescent-labeled secondary antibodies were anti-mouse Alexa Fluor®-555 and Alexa Fluor®-594; anti-rabbit Alexa Fluor®-488 and Alexa Fluor®-594; anti-rat Alexa Fluor®-568 (Thermo Fisher Scientific). Nuclei were counterstained with fluorescent mounting medium plus 100 ng/ml 4′,6-diamidino-2-phenylindole (DAPI) (Sigma-Aldrich). At least 5 high power fields were analyzed for each section. Staining was never observed when the primary antibody was omitted. Percentage of positive fibers were calculated by using the NIS-Element BR 4.10.00 software.
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3

Western Blot Analysis of Protein Targets

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Total protein (right tibia) was obtained using radioimmunoprecipitation assay (RIPA) lysis buffer (ApllyGen, Beijing, China). Protein concentration was determined using the BCA Protein Assay Kit (CWBIO, Beijing, China). Extracts were fractionated by SDS-PAGE and subsequently transferred to a polyvinylidene fluoride membrane (PVDF, IPVH00010, Millipore). After blocking with 3% non-fat dry milk in Tris-buffered saline (TBS), we incubated the membranes overnight at 4°C with antibody to FNDC5 (Abcam, Shanghai, China), β-catenin (Abcam, Shanghai, China), Akt (Cell Signaling Technologies, Hitchin, UK), and phospho-Akt (Ser473) (Cell Signaling Technologies, Hitchin, UK). For loading control, we used antibodies to β-actin. The secondary antibody was diluted to 1:2,000 and incubated with the membrane for 2 h at room temperature. After the last washing step, configure the luminescent liquid, soak the PVDF film with the luminescent liquid, and place it in the sample placement area of the ultra-high-sensitivity chemiluminescence imaging system (Chemi Doc™ XRS+, Shanghai, China) to run the program to develop the imaging.
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4

Protein Expression Analysis in Mouse Brain

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30 µg of total protein extracted from mouse brains or cell lysate was subjected to SDS-PAGE, separated proteins were transferred to nitrocellulose membrane and blocked in 5% BSA in TBS/0.1% Tween 20 (TBST) and then incubated with indicated primary antibodies: Sirt1 (Cell Signaling Technology, 1:1000), BDNF (Abcam, 1:1000), GAPDH (Abcam, 1:10000), PGC-1α (Cell Signaling Technology, 1:1000) and FNDC5 (Abcam, 1:1000) at 4 degrees overnight. The expression of indicated proteins was detected by incubating the blots with HPR-conjugated secondary antibodies.
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5

Protein Expression Analysis of BM-MSCs

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BM-MSCs were lysed in ice-cold RIPA lysis buffer supplemented with protease inhibitor cocktail and insoluble debris was removed from the supernatant lysate by centrifuging at 15,000 × g for 15 min. Protein concentration was examined using BCA Protein Assay (Thermo Scientific, Waltham MA). 50 μg of total protein was loaded in each lane of 10% SDS-PAGE and transferred to nitrocellulose membranes. After the non-specific binding was blocked using 3% non-fat milk in TBST, membranes were incubated with primary antibodies against ALP (1:1000 dilutions, Abcam, UK), BMP4 (1:20000 dilutions, Abcam, UK), RUNX2 (1 µg/ml, Abcam, UK), Spp1 (1.25 µg/ml, Abcam, UK), Colla1 (1 µg/ml, Abcam, UK), FNDC5 (1:3000 dilutions, Abcam, UK), Irisin ((1:3000 dilutions, Abcam, UK), integrin αv (1:5000 dilutions, Abcam, UK) and GAPDH (1:1000 dilutions, Abcam, UK) overnight at 4 °C. Membranes were then washed three times with 0.1 M PBST, followed by incubation with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 h at room temperature. Blots were developed and detected using Pierce ECL chemiluminescent substrates (Thermo Scientific, Waltham, MA).
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6

Extraction and Western Blot Analysis of Cellular Proteins

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To extract total proteins from cells, they were treated with a lysis buffer supplemented with protease inhibitors (Solarbio, Beijing, China, Cat. P6730), phosphatase inhibitors (Solarbio, Beijing, China, Cat. P1260) and phenylmethylsulfonyl fluoride (PMSF) (Solarbio, Beijing, China, Cat. P8340). The extracted proteins were loaded on 10% SDS-polyacrylamide gels and transferred onto nitrocellulose filter membranes (Solarbio, Beijing, China, Cat. HATF00010). Then, the membrane was rinsed with PBS and sealed with 5% skim milk in PBS for 1 h. Western blotting was performed using the standard method for the following proteins with corresponding detection antibodies (in brackets): FNDC5 (1:1000, Abcam, Cambridge, UK, Cat. ab174833), anti-ERK1/2 and anti-phospho-ERK1/2 (1:2000, Cell Signaling Technology, Boston, MA, USA, Cat. 4370S). β-actin (1:2500, Proteintech, Wuhan, China, Cat. 205361AP) was used as an internal reference. After being washed with TBST, the membranes were incubated with a secondary antibody (1:10000, LI-COR, Lincoln, NE, USA, Cat. 92632211) for one hour at room temperature. Then, the membranes were washed with TBST again and imaged with the Odyssey CLX imaging system (LI-COR, USA).
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7

Molecular Markers of Metabolic Health

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The primary antibodies against p-Akt (Ser473), Akt, p-Smad2, p-Smad3, PPARγ, p-ACC1 and PGC1-α were from Cell Signaling Technology (Beverly, MA). Antibodies against F4/80, CD68, Fndc5 and UCP-1 were from Abcam (Cambridge, MA). ELISA kits for measuring irisin, IL-6 or adiponectin were from BioVision (Milpitas, CA), eBioscience (San Diego, CA) or R&D Systems (Minneapolis, MN) respectively. The recombinant proteins, irisin or myostatin were obtained from Enzo life Sciences (Farmingdale, NY) or R&D systems. The anti-myostatin peptibody (peptibody) was from Atara Biotherapeutics (Westlake Village, CA) (21 (link);22 (link)). Serum insulin concentration was measured using the Rat/Mouse Insulin ELISA kit (Millipore, Billerica, MA). Serum free fatty acid levels were measured using the NEFA C kit from Wako (Richmond, VA).
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