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2 protocols using arid1b

1

Co-Immunoprecipitation of Chromatin Remodelers

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Co-IP was performed as described in Wu et. al. 2014 (link) (Wu et al., 2014 (link)). Antibodies against Brm (Abcam, ab15597), Brg1 (Santa Cruz, sc10768), V5 (Abcam ab15828), Arid1a (Sigma HPA005456), Arid1b (Santa Cruz, sc32762x), Baf155 (Santa Cruz, sc9746), C/ebpα (Santa Cruz, sc166258), and E2f4 (Milipore 05-312) were used for western blot analysis and/or Co-IP.
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2

Western Blot Analysis of Cell Signaling

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Protein lysates were quantified using the Micro BCA Protein Assay Kit (ThermoFisher) and a FlexSystem3 plate reader. Protein lysates were run on a 4–15% gradient sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) gel (BioRad) and transferred to PVDF membrane using the TransBlot Turbo system (BioRad). Primary antibodies were used at the following dilutions: 1:1000 ARID1A (D2A8U) (12354, Cell Signaling); 1:1000 Akt (4691, Cell Signaling); 1:1000 β-Actin (8457, Cell Signaling); E-Cadherin (3195, Cell Signaling); 1:2000 Phospho-Akt (Ser473) (4060, Cell Signaling); 1:1000 Slug (9585, Cell Signaling); 1:1000 Snail (3879, Cell Signaling); 1:1000 Twist1 (T6451, Sigma); 1:100 ARID1B (sc-32762, Santa Cruz); 1:1000 Brg1 (ab110641, Abcam); 1:1000 BRM (11966, Cell Signaling); 1:100 ARID1A (PSG3) (sc-32761, Santa Cruz). Horseradish peroxidase (HRP) conjugated secondary antibodies (Cell Signaling) were used at a dilution of 1:2000. Clarity Western ECL Substrate (BioRad) was used for protein band visualization, and western blot exposures were captured using the ChemiDoc XRS + imaging system (BioRad). Uncropped western blot images can be found in Supplementary Fig. 7.
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