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Blasticidin

Manufactured by Gemini Bio

Blasticidin is a selection antibiotic used in cell culture applications. It is effective against a broad range of organisms, including mammalian, insect, and plant cells.

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4 protocols using blasticidin

1

Generation of split-GFP and splitHalo HEK293T cell lines

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The split-GFP, and splitHalo landing pad HEK293Ts, were generated from a published landing pad parent cell line 28 (link) seeded at 100k cells in a 12-well plate. To each well, 600 ng of BxbI Integrase Expression Vector (Addgene #51271) and 600 ng of each landing pad donor plasmid were co-transfected. Once cells are confluent, cells were split once and seeded in a T25 flask, and blasticidin (Gemini Bio-Products 400-165P) was added at 5 μg/mL for selection prior to FACS sorting integrated cell lines.
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2

Retroviral Transduction of CRC Cell Lines

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For infection of CRC cell lines with pMX-IRES constructs, retroviral particles were generated by transfection of HEK 293GP cells with Lipofectamine 3000 (Invitrogen). The virus-containing medium was collected after 8 hr or overnight and supplemented with 4 μg/ml polybrene (Sigma-Aldrich) and 1% FBS. Subsequently, the virus was filtered using 0.45 μm filter and viral supernatant was added to the target cells for 8 hours to overnight. Selection for infected cells was done with 12.5 μg/ml Blasticidin (Gemini Bio Products) for over a week.
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3

Retroviral Infection of CRC Cells and Organoids

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For infection of CRC cell lines with pMX-IRES constructs, retroviral particles were generated by transfection of HEK 293GP cells with Lipofectamine 3000 (Invitrogen). After transfection, the cell supernatants were collected and used to infect CRC cells, and the stably transfected cells were selected using puromycin and confirmed by quantitative RT-PCR. Selection for infected cells was done with 12.5 ug/ml Blasticidin (Gemini Bio Products) for over a week. SMARTpool siRNA for DKK3, Antagomir-92a, miR-92a mimic and corresponding control oligonucleotides (Dharmacon) were transfected into CRC cells by using Lipofectamine 3000 according to manufacturer’s protocols. For stable infection of organoids, PMX-IRES GFP constructs were used. The retroviral particles were prepared as mentioned above and concentrated using reterconcentrator (Takara Biosciences). Organoid fragments were prepared following the protocol by (15 (link)) and combined with retroviral solution along with polybrene in a 24-well plate, sealed, and spinoculated at 1800 rpm at 37°C for 1 hr 45 min. Following spinoculation, plate was incubated for 6 hrs at 37°C. This was followed by seeding of infected organoids and 5 days post infection, GFP positive cells were sorted and resuspended in matrigel.
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4

Retroviral Infection of Colorectal Cancer Cells

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For infection of CRC cell lines with pMX-IRES constructs, retroviral particles were generated by transfection of HEK 293GP cells with Lipofectamine 3000 (Invitrogen). After transfection, the cell supernatants were collected and used to infect CRC cells, and the stably transfected cells were selected using puromycin and confirmed by quantitative RT-PCR. Selection for infected cells was done with 12.5 ug/ml Blasticidin (Gemini Bio Products) for over a week. SMARTpool siRNA for DKK3, Antagomir-92a, miR-92a mimic and corresponding control oligonucleotides (Dharmacon) were transfected into CRC cells by using Lipofectamine 3000 according to manufacturer's protocols. For stable infection of organoids, PMX-IRES GFP constructs were used. The retroviral particles were prepared as mentioned above and concentrated using reterconcentrator (Takara Biosciences). Organoid fragments were prepared following the protocol by (15) and combined with retroviral solution along with polybrene in a 24-well plate, sealed, and spinoculated at 1800 rpm at 37 0 C for 1 hr 45 min. Following spinoculation, plate was incubated for 6 hrs at 37 0 C. This was followed by seeding of infected organoids and 5 days post infection, GFP positive cells were sorted and resuspended in matrigel.
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