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Dako diluent

Manufactured by Agilent Technologies
Sourced in United States

Dako Diluent is a product designed for use in various laboratory applications. It serves as a diluent, which is a liquid used to dilute or prepare samples for analysis. The core function of Dako Diluent is to provide a consistent and reliable medium for diluting specimens or reagents as required by the specific laboratory protocol or procedure.

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15 protocols using dako diluent

1

Immunofluorescence Staining of Cryosections

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Cryosections were air-dried for 30 min and hydrated in Tris-buffered saline (TBS) for 30 min. Glass slides or coverslips were rinsed three times in TBS Triton (0.5%) and incubated in Normal Goat Serum 10%, (Gibco, 16210-064) diluted in Dako Diluent (Dako, S3022) for 30 min. Primary antibodies were incubated overnight in Dako Diluent at 4°C. Chicken anti-EGFP (Invitrogen, A10262, 1:1000), mouse anti-Vimentin (Sigma, V6630, 1:400), mouse anti-NeuN (Millipore, MAB377, 1:100), Rabbit anti Ki67 (Neomarker, clone sp6, RM9106S1, 1:400). After 3 TBS wash, relevant secondary antibodies were incubated in Dako Diluent (Dako, S3022) 1 h at RT, at the following concentrations: Alexa Fluor 488 goat anti-chicken IgY (Invitrogen, A11039, 1:1000), Alexa Fluor 555 goat anti-mouse IgG (Invitrogen, A21422, 1:800), Alexa Fluor 488 goat anti-mouse IgG (Invitrogen, A11001, 1:1000), Alexa Fluor 555 goat anti-rabbit IgG (Invitrogen, A21428, 1:800). Nuclear staining was performed using DAPI (Invitrogen, D1306, 3 μM in TBS), for 10 min at RT. Mounting was realized in Fluoromount-G Medium (Southern Biotech, 0100-01).
Confocal examination of the fluorescent labeling was carried out on a LEICA DM 6000 CS SP5 equipped with an Argon laser tuned to 488 nm, a HeNe laser 543 nm, a HeNe laser 633 nm, and a diode 405 nm. Acquisition were performed using oil objectives (×40), thanks to the LAS AF software (Leica).
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2

Immunohistochemical Analysis of Discarded IMA

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Discarded human IMA were taken from the operation room and placed immediately at -80°C. The snap frozen tissues were embedded with OCT (Surgipath, #01480, Leica Biosystems, Nussloch, Germany) and equilibrate at -20°C for frozen sectioning to 5 μm. Sections were air dried for 5 min and washed to remove OCT. For immunohistochemical staining, each section was blocked with blocking solution for 1 h and incubated for 15 minutes in 3% H2O2 diluted in methanol, with complete washing of sections between each steps. Specimens of LIMA were stained with primary antibodies: rabbit polyclonal to Axl (Abcam, #ab37861, Cambridge, UK,) and rabbit polyclonal to VEGFR2 (#55B11, Cell Signaling Technology, Danvers, MA) diluted in Dako diluent (Dako, #s3022, Dako Cytomation, Glostrup, Sweden) for 1 h at room temperature followed by detection with the Dako REAL EnVision system (Dako, #K5007, Dako Diagnostics, Dublin, Ireland) and mounted under cover slips.
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3

Immunofluorescence Staining of Cryosections

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Cryosections were air‐dried for 30 minutes and hydrated in Tris‐buffered saline (TBS; pH 7.6) for 30 minutes. Slices were treated with Antigen Retrieval (Dako, Les Ulis, France) for 15 minutes at 95–96°C and then cooled to room temperature during 20 minutes. Nonspecific binding was blocked by incubation in TBS + bovine serum albumin (BSA) 1% + normal goat serum (10%, Gibco/Life Technologies, Grand Island, NY) for 30 minutes. The primary antibody was incubated overnight in TBS + 1% BSA at 4°C for 12 hours. After washing in TBS, fluorophore‐conjugated secondary antibodies were coincubated in Dako Diluent (Dako) for 1 hour at room temperature. After washing in TBS, sections were stained with 4′,6 diamidino‐2‐phenylindole (DAPI; Molecular Probes, Eugene, OR; 1:4,000 in TBS) for 10 minutes at room temperature. Sections were mounted in Fluoromount G (SouthernBiotech, Birmingham, AL).
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4

Immunofluorescence Microscopy of Phosphorylated IGFBP-1

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For HepG2 cell immunofluorescence (IF) microscopy, cells were plated on poly L-lysine coated glass coverslips and fixed after treatment with dimethyloxaloylglycine (500 μM) or Compound 3 (50 μM) (Sigma-Aldrich, St. Louis, MO, USA) using 4% paraformaldehyde. Cells were permeabilized using 0.25% TRITON X-100 in phosphate-buffered saline (PBS) × 10 minutes and blocked with Background Sniper (Biocare Medical, Pacheco, CA, USA). Primary antibodies diluted in Dako Diluent against phosphorylated IGFBP-1 at Ser101 (1:400), Ser119 (1:400), or Ser169 (1:200), polyclonal IGFBP-1 (1:2500, a kind gift from Dr. R. Baxter, Sydney, Australia), or PKCα (1:250) and incubated overnight at 4°C. The Alexa Fluor fluorescent secondary antibodies used were diluted in Dako Diluent (1:400) anti-mouse 488 or anti-rabbit 568 (Thermo Fisher Scientific, Waltham, MA, USA) and incubated for 45 minutes at room temperature. Samples were counterstained with DAPI (1:300). The stained coverslips were mounted with ProLong Gold Antifade Mountant (Thermo Fisher Scientific, Waltham, MA, USA).
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5

Analysis of CAR+ T Cell Infiltration into Xenografts

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Subcutaneous xenografts were established in NSG mice, as described above, for 14 days. The mice then received 1 × 106 CAR+ T cells intravenously. T cells were used at 12–14 days post-transduction. Tumors were collected at the indicated time points and snap frozen in optimum cutting temperature (O.C.T) embedding matrix (CellpathTM). Blocks were sectioned and stored at −80 °C. Slides were thawed at room temperature for 5 min, fixed in 10% formalin for 15 min and washed in PBS. Slides were incubated with the primary antibody, monoclonal rabbit anti-human CD3ζ (clone MRQ-39, OriGene), at a 1/1000 dilution with DAKO diluent (Ely, Cambridgeshire, UK), for 1 h. Secondary staining with the VECTASTAIN Elite ABC-HCP kit was undertaken according to manufacturers instructions (Burlingame, California, USA). Slides were counterstained with Gills no 3 Haematoxylin, differentiated in 1% acid alcohol, dehydrated and mounted.
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6

Adipose Tissue Histological Examination

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Mouse VAT, liver, distal small bowel, and colons were fixed for 48 h in 10% buffered formalin prior to processing and hematoxylin and eosin (H&E) staining or immunohistochemistry with a rabbit anti-mouse IgA primary antibody (NSJ Bioreagents R20169) (1:50 dilution in Dako diluent (Dako, Cat. No. S0809)), secondary antibody biotinylated anti-rabbit Ig (Vector Labs, Cat. No. BA-1000), and detection with avidin biotin complex (ABC) system (Vector Labs, Cat. No. PK-6100) and DAB (Abcam, ab64238, DAB Substrate Kit) solution. Fat cell diameter and crown-like structures, defined as adipocytes encircled by several immune cells on H&E staining, were counted with light microscopy or measured using a Leica DFC320 camera with the Leica application suite (LAS) software. Histological images for adipose tissue are shown at ×100 low power field and IgA staining in the small bowel and colon is shown at ×400 high power field and counted by two blinded observers (D.A.W. and S.W.).
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7

Quantitative Analysis of Mammary Gland Whole Mount and Lung Metastasis

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For whole mount staining of mammary glands, inguinal gland #4 or #9 were removed, fixed in Carnoys fixative at 4°C overnight, re-hydrated and stained with Carmine Red. Tumors and lungs removed from the mice were fixed in 10% buffered formalin and embedded in paraffin. To quantify metastatic foci in the lungs, each lobe was sectioned and stained with hemotoxylin and eosin (H&E). Image J software was used to quantify the metastatic area in each lobe of the lung. For H&E and IHC staining, 5um sections were cut, deparaffinized in xylene and rehydrated with graded ethanol series. The tumor and lung sections were then stained with either α-F4/80 (Invitrogen MF-48004) or α-Ki67 (Pharmingen 550609) antibodies as described below. All primary and secondary antibodies were diluted in DAKO diluent (DAKO). Sections were blocked with M.O.M. blocking reagent (Vector Labs) for 30min and incubated with primary antibody for 30min. The sections were rinsed and incubated with a biotinylated secondary antibody for 15min. Following the biotinylated secondary antibody, the streptavidin-Alexa dye conjugate was applied for 15min. Sections were washed for 5min with Phosphate-buffered saline (PBS) before incubating with DAB for 2min. Sections were washed in water and counter stained using Meyers hematoxylin followed by a brief rinse in DI water and mounted using Gel/Mount (Biomed, Foster City, CA).
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8

Immunohistochemical Detection of MOXD1

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Briefly, formalin-fixed paraffin-embebbed tissue sections were deparaffinised, rehydrated and subjected to an antigen retrieval step, blocked with 10% Normal Serum (PK-6200, Vector Laboratories, Burlingame, USA) in DAKO diluent (S3022, DAKO, Glostrup, Denmark), washed and incubated overnight at 4 °C with 1:300 of anti-MOXD1 (bs-17733R, Bioss, Massachusetts, USA) antibody. Specific staining was detected with secondary biotinylated horse anti-rabbit antibody (PK-6200, Vector Laboratories, Burlingame, USA) followed by Vectorstain ABC Elite reagent and DAB peroxidase substrate (SK-4105, Vector laboratories, Burlingame, USA) and counterstained with haematoxylin. Slides were mounted with permount mounting medium (SP15-100, Fisher Scientific, Pittsburgh, PA, USA) and analyzed in a light microscopy (Nikon Eclipse 55i, Melville, NY, USA).
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9

Immunohistochemical Analysis of BCL6 in Endometrial Tissue

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Endometrial samples fixed in 4% formaldehyde were paraffin-embedded and serially sectioned (5 µm sections). Sections were deparaffinized and rehydrated before endogenous peroxidase activity was blocked by incubating the sections in 3% hydrogen peroxide for 20 min at room temperature (RT). Nonspecific binding sites were blocked by incubation in the “Free Blocking Solution” (Cell Signaling, Danvers, USA) for 1 h at RT. The primary antibody was diluted at 1:100 in the “Dako diluent” (Dako, Jena, Germany) and incubated overnight at 4 °C (rabbit monoclonal anti-BCL6 (Cell Signaling 89369, Danvers, MA, USA)), followed by incubation with the secondary antibody HRP (ENVISION/HRP ready to use, Dako, Glostrup, Denmark) for 30 min at RT. The reaction was revealed using TSA-FITC (Akoya Biosciences, Marlborough, Massachusetts, USA), and the sections were mounted with DAPI FluoromountG mounting medium (SouthernBiotech, Birmingham, AL, USA).
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10

Immunohistochemistry for Estrogen Receptor Alpha

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Formalin-fixed, paraffin embedded tissues were sectioned at 5 microns and placed on charged slides. Prepared slides were then deparaffinized in xylenes and rehydrated through graded concentrations of ethanol. Antigen Masking Solution (Vector Labs, Burlingame, CA) was used to regain antigenicity. Slides were blocked for 30 minutes (Dako Serum Free Block, (Dako, Santa Clara, CA) and then incubated in primary antibody, Anti-Estrogen Receptor alpha (AB75635, ABCAM Cambridge, MA) for one hour. The primary antibody was diluted 1:100 with Dako Diluent (Dako, Santa Clara, CA). Negative and positive control slides were included. Negative control slides were incubated in diluent. Slides were rinsed with PBS (Sigma, St Louis, MO) and incubated for 30 minutes with biotinylated goat anti rabbit secondary antibody diluted 1:200 (Vector, Burlingame, CA). Slides were rinsed and then incubated for 30 minutes with Elite ABC Kit (Vector, Burlingame, CA). Slides were developed with DAB substrate (Sigma, St. Louis, MO) for 90 seconds and counterstained in Mayer’s Hematoxylin (Sigma, St. Louis, MO). All incubations were performed in a humidity chamber at room temperature.
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