The largest database of trusted experimental protocols

7 protocols using cd127 alexa fluor 647

1

Quantifying Immune Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
For cell phenotype analysis, monoclonal antibodies were directly added to 100 μL aliquots of heparinized whole blood and incubated at room temperature for 15 min. The antibodies used were: CD3 PECy7, CD14 APC, CD56 PE-Cy5 and CD19 PerCp (Biolegend, San Diego, CA, USA), CD4 Viogreen (Miltenyi Biotec GmBh, Bergisch Gladbach, Germany), CD39 Fitc, CD73 PE, CD25 BV421 and CD127 AlexaFluor 647 (BD Biosciences, San Jose, CA, USA). Red blood cells were lysed and white cells were fixed using BD FACS lysing solution (BD Bioscience). Negative populations were determined using respective anti-human isotype controls. Samples were acquired using a MACSQuant Analyzer 10 flow cytometer (Miltenyi Biotec GmBh) and the data were analyzed using FlowJo software v. 10.0 (TreeStar Inc., Ashland, OR, USA).
We compared the frequencies of four subsets based on CD39 and CD73 expression (CD39CD73+, CD39+CD73+, CD39+CD73, and CD39CD73) within each studied population (B cells as CD3CD19+, CD4+ T cells as CD3+CD4+, CD8+ T cells as CD3+CD4, NK cells as CD3CD4CD19CD56+, Tregs as CD3+CD4+CD25++CD127, and monocytes as CD14+). The percentage of these four subsets was related to their corresponding precursor populations (CD4+ T, CD8+ T, B, NK, and monocytes). In the case of Treg, the percentage was related to CD4+ T cells.
+ Open protocol
+ Expand
2

Comprehensive Immune Cell Phenotyping

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used in this study: CD3 AF700, CD4 BV421, CD4 FITC, CD6 APC, CD10 BV605, CD19 APC-Cy7, CD21 PE-Cy7, CD25 PerCP-Cy5.5, CD27 BV421, CD28 PerCP-Cy5.5, CD38 PerCp-Cy5.5, CD45RA APC-Cy7, TCR αβ PerCP-Cy5.5, IL-2 PE, LAT PE, NTAL/LAB APC, and biotin anti–human TCR-Vd2 (BioLegend); TCR-Vd1 APC (Miltenyi Biotec); CD8 APC, CD8 Pacific blue, CD21 PE-Cy7, CD31 PE, CD56 APC, CD69 FITC, CD107a PE, CD127 Alexa Fluor 647, IFN-γ FITC, TCR γδ PE, IgG Alexa Fluor 700, IκBα PE, ERK1/2(pT202/pY204) AF647, and ZAP70(pY319)/SYK(pY352) APC (BD); IgD FITC and IgA PE (SouthernBiotech); CD3 PE-Cy7, CD4 PE-Cy7, CD8 PE, CD16 FITC, CD45RA FITC, CD45 Pacific blue, Vα24 PE, and Vβ11 FITC (Beckman Coulter); CCR7 PE (R&D Systems); Bruton tyrosine kinase/ITK(pY551/pY511) PE, IL-17 PE, IL-4 APC, and ICOS PE (eBioscience); IgM Alexa Fluor 647 (Jackson ImmunoResearch Laboratories, Inc.); and PLCγ1(pY783) and goat anti–rabbit AF647 (Cell Signaling Technology). For immunohistochemistry, CD21 (Dako), CD20 (Invitrogen), CD3 (Cell Marque), CD4 and CD8 (Spring Bioscience), and Bcl-6 (Leica Biosystems) were used. For immunoblotting LAT (sc-7948; Santa Cruz Biotechnology, Inc.), FLAG tag (AHP1074; AbD Serotec), actin (sc-1616; Santa Cruz Biotechnology, Inc.), PLCγ1 (pY783; no. 2821; Cell Signaling Technology), and ZAP70 (pY319; no. 2701; Cell Signaling Technology) were used.
+ Open protocol
+ Expand
3

Comprehensive Immune Cell Profiling Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
PBMCs were thawed, washed and incubated with Gamunex and EMA, then stained with a cocktail of lineage (Lin) markers (CD3, CD19, CD56)-Brilliant Violet 605 (BioLegend, BD-Biosciences), CD14-Brilliant Violet711, CD11c-PE-Cy7 (BioLegend), CD45-V500, CD123-BV421, HLA-DR-PerCP-Cy5.5, CD15-FITC, CD11b-APC-Cy7, CD33-Alexa Fluor 700 (BD-Biosciences), and CD124-APC (R&D Systems) using EMA to identify dead cells.
To characterize Tregs, we used the same panel as before [23 (link)], staining PBMCs forCD3 (OKT3 supernatant) with Pacific Orange-conjugated secondary antibody (Invitrogen) followed by staining for CD4-Pacific Blue, CD45RA-Alexa Fluor-700, CD8-Peridinin-chlorophyll protein (PerCP), CD279-PerCP-Cy5.5, CD127-Alexa Fluor-647 (Bio legend), CD25-APC-Cy7 (BD Biosciences) and intracellular staining for FoxP3-PE (Bio legend). All samples were measured using a BD LSRII (BD Biosciences) immediately after staining.
+ Open protocol
+ Expand
4

Treg Cell Frequency Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
FACS analysis was conducted to measure the Treg cell frequency in the peripheral blood. The levels were measured using CD4 PerCP-CY5.5, CD25 PE and CD127 Alexa Fluor 647 antibodies (0.05 mg/ml BD Biosciences). The cells were incubated with the antibodies for 15 min prior to abstersion. CD4+CD25CD127+ cells were used as surface markers to indicate a positive cell group.
+ Open protocol
+ Expand
5

Comprehensive Immune Cell Phenotyping

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for flow cytometry analysis: CD4-APC-Cy7, CD4-PerCP, CD127-PE, CD127-Alexa Fluor® 647, CD25-FITC, CD25-PE-Cy7, CD14-FITC, CD16-FITC, CD20-FITC, CD45RO-PE, CD56-FITC, CD11c-FITC, TCRγδ-FITC (all from BD Pharmingen). Anti-hOX40 antibodies were purchased from eBioscience (ACT35). Anti-Foxp3 staining antibodies (236A/E7, PCH101) were from eBioscience and staining was conducted using Foxp3 fixation-/permeabilization buffer according to manufacturer’s instructions. Flow cytometry was performed on a flow cytometer (FACS Calibur or LSRFortessa, Becton Dickinson). FACS sorting was conducted on a cell sorter (FACS Aria II, BD). Functional grade anti-CD3 (OKT3) was purchased from Centocor Ortho. Antibodies against TLRs 1 were from Abcam Inc (GD2-F4), and 2, 5, 9 from BD Biosciences (EB72-1665,).
+ Open protocol
+ Expand
6

Multiparametric Flow Cytometry Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
All flow cytometry reagents were from Biolegend unless otherwise stated. Data was acquired using a LSR-II flow cytometer (BD Biosciences) and analysed using FACS DIVA software (BD Biosciences); Fluorescence Minus One (FMO) controls established gating strategies. Figures were generated using FlowJo software (Tree Star Inc.). Immune cells were further purified by separation by density gradient centrifugation over lymphoprep (Axis Shield Diagnostics) then cells were washed twice with PBS/2% FCS and consecutive centrifugation of 800 × g and 200 × g for 10 minutes.
For flow cytometry, cells were incubated with antibodies for 20 minutes at 4 °C, washed ×2 in PBS/2% FCS and fixed in Fluorofix prior to data acquisition. Antibodies used were CD4-FITC(OKT4), CD8a-PE(HIT8a), CD3-PeCy5(UCHT1), CD56-PeCy7(BD Biosciences; B159), CD16-APCCy7(BD Biosciences; 3G8), CD45-APC(HI30), CD103-FITC(BER-ACT8), CD69-PE(FN90), CD8a-PECy7(RPA-T8), CD45RO-APC-Cy7(UCHL1), CD127-AlexaFluor647(A019D5), PD-1(CD279)-APC(EH12.2H7).
+ Open protocol
+ Expand
7

Regulatory T Cell Phenotyping Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For purity checks, cells were stained with a Human Regulatory T Cell Sorting Kit cocktail including CD45RA-FITC, CD127-Alexa Fluor647, CD25-PE, and CD4-PerCP-Cy5.5 (BD Biosciences) and analysed on a FACS aria (BD Biosciences). Cells were separately stained for FoxP3 expression using a Human FoxP3 Buffer Set (BD Biosciences) together with antibodies against CD4-FITC and FoxP3-V450 and analysed with Gallios flow cytometer (Beckman Coulter). Illustrative results are shown in Additional file 1: Figure S1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!