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Rabbit anti cleaved caspase 3

Manufactured by R&D Systems

Rabbit anti-cleaved caspase-3 is a primary antibody that specifically recognizes the cleaved form of caspase-3, a key effector of apoptosis. This antibody can be used in various laboratory techniques, such as western blotting, immunohistochemistry, and flow cytometry, to detect and analyze the activation of caspase-3 in biological samples.

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6 protocols using rabbit anti cleaved caspase 3

1

Immunofluorescence Analysis of Activated Caspase-3 in Rat Brains

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The same rat brains used for LCM on PIDs 3 and 7 were used for immunofluorescence analysis of active caspase-3. Coronal brain sections (10 μm) were fixed in ice-cold 10% buffered formalin and incubated in PBS containing 10% normal goat serum and 0.3% Triton X-100 for 30 min at room temperature. The sections were incubated with primary antibodies (rabbit anti-cleaved caspase-3, 1:200; R&D; and mouse anti-NeuN, 1:100; Millipore) diluted in PBS containing 1.5% normal goat serum overnight at 4°C. They were then incubated with secondary antibodies (594- and 488-Alexa-conjugated, Invitrogen Co., Carlsbad, CA; 1:400 dilution in PBS with 1.5% normal goat serum) for 1 h at room temperature. After washing in PBS, the sections were rinsed in tap water and coverslipped with mounting media containing DAPI (Vector Laboratories, Burlingame, CA).
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2

Immunofluorescence Staining of Embryonic Cells

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Immunofluorescence was carried out as described previously 38 (link). Briefly, embryos were fixed in 4% paraformaldehyde, washed in PBS-T (PBS containing 0.1% Tween) and permeabilized with 0.5% Triton X-100 for 20 minutes. Embryos were incubated with primary antibodies in 3% BSA (Sigma) in PBS-T overnight at 4°C. The embryos were then washed twice in PBS-T and incubated with secondary antibodies (Invitrogen, AlexFluor; 1:400 in 3% BSA) for 2 hours before final washes in PBS-T and M2 and imaging in drops of M2 on glass-bottomed dishes. Primary antibodies used: goat anti-Sox17 (R&D Systems), mouse anti-Cdx2 (Biogenex), rabbit anti-Nanog (2B Scientific), goat anti-Gata4 (Santa Cruz), goat anti-Gata6 (R&D Systems), mouse anti-Oct4 (Santa Cruz), rabbit anti-pSmad1 (Cell Signaling) and rabbit anti-cleaved Caspase 3 (R&D Systems). DAPI was used as the nuclear counterstain in all experiments and all primary antibodies were used at a dilution of 1:200. Multi-channel images were acquired for multiple sections using a Leica SP5. Image processing and cell counting were performed with Fiji software (http://fiji.sc).
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3

Immunofluorescence Staining of Embryonic Cells

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Immunofluorescence was carried out as described previously 38 (link). Briefly, embryos were fixed in 4% paraformaldehyde, washed in PBS-T (PBS containing 0.1% Tween) and permeabilized with 0.5% Triton X-100 for 20 minutes. Embryos were incubated with primary antibodies in 3% BSA (Sigma) in PBS-T overnight at 4°C. The embryos were then washed twice in PBS-T and incubated with secondary antibodies (Invitrogen, AlexFluor; 1:400 in 3% BSA) for 2 hours before final washes in PBS-T and M2 and imaging in drops of M2 on glass-bottomed dishes. Primary antibodies used: goat anti-Sox17 (R&D Systems), mouse anti-Cdx2 (Biogenex), rabbit anti-Nanog (2B Scientific), goat anti-Gata4 (Santa Cruz), goat anti-Gata6 (R&D Systems), mouse anti-Oct4 (Santa Cruz), rabbit anti-pSmad1 (Cell Signaling) and rabbit anti-cleaved Caspase 3 (R&D Systems). DAPI was used as the nuclear counterstain in all experiments and all primary antibodies were used at a dilution of 1:200. Multi-channel images were acquired for multiple sections using a Leica SP5. Image processing and cell counting were performed with Fiji software (http://fiji.sc).
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4

Quantifying Cell Proliferation and Apoptosis

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Cells seeded over sterile coverslips and grown in 10% FBS were fixed in 4% PFA. Cells were permeabilized with 0.2% Triton in PBS and blocked with 5% BSA, 0.1% Tween-20. Coverslips were incubated overnight with rabbit anti-P-Histone H3 (Ser10) (Millipore) to determine proliferation or with rabbit anti-cleaved caspase 3 (R&D) to determine apoptosis. Negative controls were incubated with an irrelevant rabbit IgG (data not shown). An anti-rabbit Alexa Fluor 488 (Invitrogen) was used as the secondary antibody. Coverslips were mounted with DAPI Fluoromont-G (Southern Biotech), and IF was detected with an Olympus BX61 Microscope. Ten fields were quantified per coverslip at 10×. The number of P-Histone H3 positive cells was manually counted and compared to the total number of cells (DAPI positive) for each experiment, which was quantified using an ImageJ macro developed in the CRG Advanced Light Microscopy Unit facility (CRG, Barcelona).
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5

Characterization of Cellular Markers

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Cryo-sections were blocked for two hours with 10% horse serum in 0.1% Triton-X in 1XPBS followed by primary antibody staining with mouse anti-α-smooth muscle actin (Chemicon International) at a concentration of 1:100, rabbit anti-Ki67 (abcam) at a concentration of 1:500, or rabbit anti-cleaved caspase3 (R&D Systems) at a concentration of 1:1000 overnight at 4°C. Secondary antibodies conjugated with either donkey anti-mouse Alexa Fluor 488 or donkey anti-rabbit Alexa Fluor 555 (Thermo Fisher Scientific) were used at a concentration of 1:1000 for two hours at room temperature. Three 15-minute 1XPBS washes were performed between antibody incubations. Fluorescent images were visualized and photographed on a Zeiss M1 Epifluorescent microscope with Axiovision software.
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6

Immunohistochemistry Analysis of Frozen Tissues

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Histopathology and immunohistochemistry were performed on frozen tissue sections. Frozen sections were air dried and fixed with 3% formaldehyde. Hydrogen peroxide was used to quench endogenous peroxidases. Tissue was blocked with 10% normal goat serum in PBS with 0.1% Tween-20. Primary antibodies against mouse antigens included: rat anti-F4/80 (eBioscience, San Diego, CA), rat anti-Ly6C (Abcam), rat anti-Ki67 clone TEC3 (Dako), rat anti-CD31 (BD Pharmingen), rat anti-CD45 (BD Pharmingen) and rabbit anti-cleaved caspase-3 (R&D Systems). Tissues were incubated in blocking buffer containing primary antibodies overnight at 4ºC. After washing with PBS, tissues were incubated with PBS containing a secondary biotinylated goat anti-rat antibody (BD Pharmingen). Tissues were developed using Vectastain ABC kit and counterstained with hematoxylin. Senescence associated Beta-galactosidase staining was performed using the Senescence β-Galactosidase Staining kit (Cell Signaling Technology). Fluorescent imaging was performed on an IX83 inverted microscope (Olympus) and brightfield images were acquired using a BX43 upright (Olympus) microscope.
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