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4 6 diamindino 2 phenylindole dapi

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DAPI (4′,6-diamindino-2-phenylindole) is a fluorescent stain used to detect and quantify nucleic acids, specifically DNA, in biological samples. It binds strongly to adenine-thymine (A-T) rich regions of the DNA double helix.

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6 protocols using 4 6 diamindino 2 phenylindole dapi

1

Immunohistochemical Analysis of Human Placenta

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Immunohistochemical staining of human villi or placenta tissue was performed as previously described using rabbit anti-USP2 (dilution 1:200; Abgent, UK), rabbit anti-Cytokeratin 7 (CK7) (dilution 1:200; proteintech), rabbit anti-HLA-G (dilution 1:200; proteintech). Cells were fixed in 4% paraformaldehyde, permeabilized using 1% Triton X-100 for 30 min, and blocked with 5% BSA for one hour at room temperature. Indirect immunofluorescence was performed using primary antibodies, rabbit anti–β-catenin (1:1,000; Cell Signaling), and secondary antibodies, goat anti-rabbit (1:1,000; proteintech). Nuclear were counterstained with 4′,6-diamindino-2-phenylindole (DAPI; Molecular Probes). Images were acquired using an Olympus microscope. The confocal images were acquired by Laser Scanning Biological Microscope (Olympus). Immunohistochemical staining quantifications were assessed using ImageJ software.
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2

Immunofluorescence Staining of UV-Treated Cells

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HeLa and Jurkat T cells (5 × 103 or 1 × 104 per 12 mm flame sterilized coverslips) treated with UV (30 mJ/cm2) or without were washed with 1 × PBS and fixed with 5% formaldehyde (Sigma-Aldrich) for 10 min at room temperature. Then, cells were rinsed three times with 0.1% Triton X-100/PBS, and blocked with 3% skim milk in 0.1% Triton X-100/PBS for 1 h at room temperature. The cells were incubated with anti-HAUSP and/or anti-ANXA1 antibodies for 2 h at room temperature. After, the cells were washed three times with 0.1% Triton X-100/PBS, and then incubated with 1:200 diluted FITC-conjugated goat anti-rabbit or anti-mouse IgG (Molecular Probes, Eugene, OR, USA). Cells were stained with 4', 6-diamindino-2-phenylindole (DAPI) (Molecular Probes) for nuclei staining. Afterward, coverslips were mounted onto glass slides using 90% glycerol/100 mM Tris (pH 8.0) and cell images were captured by using a Zeiss Axiovert 100 M microscope (Carl Zeiss, Oberkochen, Germany) attached to an LSM 510 confocal unit.
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3

Tracking EV Uptake by HSFs and HMECs

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To determine the ASC‐EVs uptake by HSFs and HMECs, EVs were labelled with a green fluorescent dye (PKH67; Sigma‐Aldrich) according to the previously described protocol and then incubated with HSFs and HMECs at 37°C for 3 hours. The cells were washed with PBS and fixed in 4% paraformaldehyde for 15 minutes followed by the 4',6‐diamindino‐2‐phenylindole (DAPI) (0.5 µg/mL; Invitrogen, Carlsbad, CA, USA) staining on the nuclei. The fluorescence microscopy was used to detect the green signals in HSFs and HMECs. The recipient cells stimulated with ASC‐EVs for 3 hours were harvested to assess the miRNA transfer from EVs to HSFs and HMECs. The miRNA expression was analysed by reverse transcription–quantitative PCR (RT‐qPCR).
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4

Bovine Lactoferrin Formulation and Characterization

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Bovine lactoferrin (bLf), derived from bovine colostrum, was provided as a generous donation by Fonterra, located in Palmerston North, New Zealand. Stearic acid (Grade I, with a purity of at least 99% according to gas chromatography) and a combination of high- and low-methoxyl pectin sourced from apples were used, as well as 3-[4,5-dimethylthiazol-2-yl]-2,5 diphenyltetrazolium bromide (MTT), fluorescein isothiocyanate (FITC), fluorescein sodium salt, sodium azide, verapamil, MK-571 sodium salt hydrate, and ethylenediaminetetraacetic acid (EDTA), acquired from Sigma Aldrich, based in St. Louis, MO, USA. Soybean lecithin was obtained from BDH, located in Poole, UK. Poloxamer 188 was procured from BASF in Ludwigshafen, Germany. Chitosan with low viscosity was purchased from Fluka, situated in Park Rabin Rehovot, Israel. Dulbecco’s Modified Eagles’ Medium (DMEM), fetal calf serum, penicillin-streptomycin-glutamine, nonessential amino acids, trypsin-EDTA, sterile phosphate-buffered saline (PBS) (pH 7.4), and Hank’s balanced salt solution (HBSS) buffer (pH 7.4) were purchased from Life Technologies (Carlsbad, CA, USA). The 4′6-diamindino-2-phenylindole (DAPI) was purchased from Invitrogen (Auckland, New Zealand). The Caco-2 cell line was purchased from the American Type Culture Collection (Manassas, VA, USA). All other reagents and chemicals were of analytical grade.
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5

Immunofluorescence Microscopy of Msi2, GFP, and Sdc1

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Cells were either allowed to settle briefly on poly-L-lysine coated chamber slides (VWR) at 37 °C or cytospun, fixed with 4% paraformaldehyde (USB Corporation), permeabilized with 1X Dako wash buffer (Dako) and blocked with 10–20% normal goat serum (Invitrogen) or donkey serum (Abcam) in 1X Dako wash buffer. Primary antibody incubation was overnight at 4 °C. The following primary antibodies were used: rabbit anti-Msi2 1:200 (Abcam), chicken anti-GFP 1:200 (Abcam) and mouse anti-Sdc1 1:100 (Abcam). Alexa fluor-conjugated secondary antibody incubation was performed for 1 h at room temperature. DAPI (4-6-diamindino-2-phenylindole; Molecular Probes) was used to detect DNA. Images were obtained with a Confocal Leica TCS SP5 II (Leica Microsystems).
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6

Immunofluorescence Analysis of MSI2 and HOXA9

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The day prior to plating cells, 4-well removable chamber slides (Lab Tek II) were coated with Cell-Tak and kept at 4°C overnight. The next day, FLAG-tag MSCV-MSI2-IRES-GFP or FLAG-tag MSCV-MSI2HOXA9-IRES-GFP infected K562 cells were labeled with 100nM Mitotracker Deep Red FM (Thermo Fisher) at 37°C. After washing twice with PBS, cells were fixed with 4% PFA at 37°C and washed with warm PBS. Cells were spun onto the Cell-Tak coated chamber slides with the brake off and then allowed to settle for an additional 30 minutes. Cells were then permeabilized with 0.1% Triton X-100 for 3 minutes and then blocked in PBS with 10% normal goat serum, 5% bovine serum albumin, 0.3M glycine, and 0.05% Tween-20 for 1 hour. After blocking, cells were incubated with primary antibody in 1:10 diluted blocking buffer overnight at 4°C. The following primary antibodies were used: chicken anti-GFP 1.5:1000 (Abcam) and rabbit anti-FLAG 1.5:1000 (Cell Signaling Technology). Alexa fluor-conjugated secondary antibody (1:500) incubation was performed for 1 hour at room temperature. DAPI (4–6-diamindino-2-phenylindole; Molecular Probes) was used to detect DNA. Images were obtained with a Zeiss LSM-700 confocal microscope.
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