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Monolith instrument

Manufactured by NanoTemper
Sourced in Germany

The Monolith is a lab instrument designed for Label-Free Interaction Analysis. It measures the interactions between biomolecules using a technique called Microscale Thermophoresis.

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4 protocols using monolith instrument

1

Thermophoresis of α-Synuclein Oligomers

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The thermophoresis experiments with fluorescently labeled monomeric and oligomeric α -synuclein were performed as described previously (Wolff et al., 2016 (link)), using a Monolith instrument (Nanotemper, Munich, Germany) and glass capillaries (Nanotemper, Munich, Germany) with hydrophobic coating (oligomeric α -synuclein) or uncoated (monomeric α -synuclein). A two-fold dilution series of AS69 in 20 mM phosphate buffer pH 7.4 with 50 mM NaCl was prepared and then either 10 μl of 5x diluted oligomers (corresponding to 0.6–1.2 μM) or 1 μM labelled monomer was added to each sample of the dilution series. We performed the binding experiments under these buffer conditions for optimal comparability with previous ITC experiments of AS69 binding to monomeric α -synuclein (Mirecka et al., 2014 (link)).
MST experiments were performed at 40% laser power and 75% LED power (oligomers) or 60% laser power and 20% LED power (monomers). For calculation of the relative change in fluorescence from thermophoresis, the cursors were set before the temperature jump followed by 5 s after the temperature jump (oligomers) and 45 s after the temperature jump (monomers).
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2

Fluorescent Labeling and Binding Affinity Measurement

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ImuA was labeled using the His‐tag Protein Labeling Kit RED‐Tris‐NTA 2nd generation (NanoTemper Technologies) according to the manufacturer's directions in the supplied MST buffer, using 200 nM ImuA (molar dye: protein ratio ≈1:4) at room temperature for 30 min in the dark. Unreacted dye was removed by centrifugation at 14,000×g for 10 min at 4°C.
Labeled ImuA was diluted to 100 nM with MST buffer (20 mM, 0.6 M NaCl, 10% v/v glycerol, 2 mM BME, 0.01% Triton‐X100). ImuBNΔ34 was serially diluted 2‐fold in MST buffer containing 0.01% Triton‐X100, with the highest concentration starting at 54 μM. For the MST measurement, each ImuBNΔ34 sample was mixed with equal volumes of ImuA, resulting in final concentrations of 50 nM ImuA and ImuBNΔ34 ranging from 27 μM to 0.82 nM and incubated for 20 min. at room temperature. Samples were then loaded into Monolith capillaries (NanoTemper Technologies) and placed in the Monolith instrument (Nanotemper Technologies) for MST measurements at 25°C. 8% LED power and medium MST power were used in the data collection. Three independently pipetted measurements were analyzed from an MST‐on time of 21 s with the MO. Affinity Analysis software (version 2.3, NanoTemper Technologies).
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3

HEK-293T Cells Thermophoresis Assay

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HEK-293T cells (CL-0005) were purchased
from Procell Life
Science & Technology Co., Ltd. (Wuhan, China). Cells were transfected
with expression plasmids for pEGFP-C1 and pEGFP-C1-MrgprA3 (synthesized
by Sangon Biotech Shanghai, China), and the lysates were collected
as assay buffer for MST experiments. A NanoTemper Monolith instrument
(NT.115) (NanoTemper Technologies, München, Germany) was employed
for measuring thermophoresis. Samples were loaded into Monolith NT.115Pico MST standard-treated capillaries and measured using Monolith
NT.115Pico and MO.Control software (NanoTemper Technologies)
at 37 °C.
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4

Characterization of GST-tagged Protein Interactions

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MST assay was performed as previously described (7 (link)). Buffers in the recombinant GST, GST-CPK28, GST-CPK28EFm, and GST-ΔCPK28 proteins were replaced with phosphate buffered saline with 0.005% Tween-20 (PBST) buffer (pH 7.4) using column A (NanoTemper Technologies). Next, 10 mM GST, GST-CPK28, GST-CPK28EFm, and GST-ΔCPK28 proteins were labeled with excess NHS NT-647 dye at a molar ratio of 1:5 for 30 min at a 22°C chamber in the dark. Free unlabeled dye was removed by column B, which was reequilibrated with PBST buffer. CaCl2 (1 mM) was serially diluted with Hepes buffer [20 mM Hepes (pH 7.4) and 150 mM KCl] and kept constant with the dilution ratio being 0.5, which was mixed with the same amount of labeled protein. Last, the mixtures were loaded into capillaries (NanoTemper Technologies) and analyzed by NanoTemper Monolith Instrument (NT.115) (NanoTemper Technologies) with 20% LED power and 20% MST power. Dissociation constant (Kd) was calculated using Signal Thermophoresis and T-Jump Data.
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