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BACE1 is a laboratory equipment product offered by Santa Cruz Biotechnology. It functions as a beta-secretase enzyme, which is involved in the processing of the amyloid precursor protein. The core function of BACE1 is to cleave the amyloid precursor protein, a key step in the generation of amyloid-beta peptides.

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5 protocols using bace1

1

Quantitative Analysis of Amyloid-related Proteins

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The methods of IHC staining have been reported previously (Pan et al., 2018 (link)). Briefly, sections were blocked with 3% BSA for 30 min, then incubated with primary antibodies overnight at 4°C, including BACE1 (1:100, Santa Cruz Biotechnology, USA), IDE (1:100, Santa Cruz Biotechnology, USA), β-amyloid (B-4, 1:100, Santa Cruz Biotechnology, USA). PBS was used as a negative control instead of the primary antibody. Subsequently, the sections were washed with PBS three times and were incubated with secondary antibody for 1 h at room temperature. Sections were counterstained with hematoxylin and visualized with DAB (ZSJQ, Beijing, China). The captured images were analyzed using Image Pro Plus 6.0 software (Media Cybernetics, Rockville, MD, USA). For quantification, we calculated BACE1, IDE- and β-amyloid-positive areas under 40× magnification (hippocampus) or under 20× magnification (cortex) in three random fields in the brain of each mouse, and the staining was quantified as fraction of immune-positive staining to the total area measured.
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2

Western Blot Analysis of APP Pathway

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Brain (cortex and hippocampus regions) was homogenized in RIPA lysis buffer containing protease inhibitors as described [31 (link)]. Equal amounts of sample protein were separated on Tris–HCl polyacrylamide SDS gels and transferred to polyvinylidene fluoride membranes. Blots were placed in blocking solution with 10% non-fat milk in PBS with 0.05% Tween-20 (PBS-T) for 1 h, followed by incubation with various primary antibodies with 5% non-fat milk in PBS-T for 3 h at room temperature or overnight at 4 °C. Primary antibodies include BACE1 (Santa Cruz), ADAM10 (Santa Cruz), ADAM17 (Millipore Sigma), Presenilin-1 (PS-1) (Novus Biologicals) and APP [to detect both full-length APP and C-terminal fragments (CTFs); CT695, ThermoFisher]. Blots were washed with PBS-T, incubated with horseradish peroxidase-conjugated secondary antibodies, and then developed with Super Signal® West Pico chemiluminescent Substrate (Thermo Scientific).
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3

Western Blot Analysis of ER Stress Markers

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Standard Western blot protocol was used as described previously (59 (link)). Protein samples were subjected to SDS-PAGE and transferred to supported nitrocellulose membranes (GE Healthcare Life Sciences). Membranes were stained with ponceau S (Sigma-Aldrich) for protein detection, then blocked with blocking buffer (5% bovine serum albumin in Tris Buffered Saline with Tween 20) and probed with primary antibodies against APP (abcam, Y188), β-actin (Sigma-Aldrich, Clone AC-15), α-tubulin (Sigma-Aldrich, T5168), GM130 (BD Biosciences, Clone 35), PDI (Cell Signaling, C81H6), IRE1 (Novus biological, NB100-2324), phosphor-IRE1 (Novus biological, NB1002323), OASIS (Santa Cruz Biotechnology, sc-514635), presenilin-1 (Santa Cruz Biotechnology, sc-365450), BACE1 (Santa Cruz Biotechnology, sc-33711). Membranes were then probed with horseradish peroxidase–conjugated secondary antibodies (GE Healthcare) and visualized by ECL (SuperSignal West Dura Extended Duration Substrate, Thermo Fisher Scientific). Blots were quantified using the CCD-based Amersham Imager 680 system (GE Healthcare Life Sciences) and the intensity of bands was measured using Image J.
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4

Hippocampal Protein Expression Analysis

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The hippocampus was isolated from the brain hemisphere and lysed in NETN lysis buffer containing protease inhibitor PMSF. Equal amounts of the lysates were loaded and separated using SDS–PAGE. Next, the proteins were transferred to nitrocellulose membranes (GE Healthcare) and blocked using 5% skim milk in TBST for 1 h. The membrane was incubated with indicative primary antibodies at 4°C overnight: GAPDH (1:1,000; Cell Signaling Technology), hAPP(1:1,000; Invitrogen), LAMP1 (1:1,000; Santa Cruz), and BACE1 (1:500; Santa Cruz). The membranes were then incubated with IRDye-conjugated anti-mouse or rabbit secondary antibodies for 2 h at RT. Proteins were detected using Odyssey CLx and quantified using the ImageJ software.
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5

Protein Expression Analysis of Brain Tissues

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The protein expressions of the brain tissues and cell specimens were analyzed as described previously [25 (link)]. The primary antibodies included MRTF-A (1:1000, sc-398675, Santa Cruz, CA, USA), APP (#2452, Cell Signaling Technology, MA, USA), and BACE1 (1:1000, sc-33711, Santa Cruz, CA, USA), p62(1:1000, P0067, Sigma-Aldrich St. Louis, USA), Beclin1(1:1000, #3738, Cell Signaling Technology, MA, USA), mTOR (1:1000, ab32028, Abcam, MA, USA), p-mTOR(1:1000, sc-293133, Santa Cruz, CA, USA), and β-actin (1:1000, sc-8432, Santa Cruz, CA, USA). The antibodies were diluted in TBST buffer (50mM TrisHCl, 150mM NaCl, 0.1% Tween-20, pH 7.4) (P0015F, Beyotime, Shanghai, China) and incubated with the PVDF membrane at 4° C overnight. Corresponding horseradish peroxidase (HRP)-conjugated secondary antibodies (1:5000, sc-2004, sc-2005, Santa Cruz, CA, USA) was subsequently incubated with the PVDF membrane for 90 minutes at room temperature. Signal detection was performed with an enhanced chemiluminescent (ECL) reagent (G2020-25ML, Servicbio, Shanghai, China). The luminescent signals were detected by a BioRad ChemiDoc MP system.
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