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6 protocols using ab181848

1

Immunoblotting Analysis of Mitochondrial and Antioxidant Proteins

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BCPAP cells or C643 cells were harvested and lysed with RIPA buffer (Millipore). Immunoblotting was performed in a standard fashion. The following antibodies were used: β-actin (1 : 1000; cat #AF5003; Beyotime, China), NDUFB3 (1 : 500; cat #SC-393351; Santa Cruz, CA), MT-ND1 (1 : 1000, cat #ab181848; Abcam), MT-ND2 (1 : 1000, cat #PA5-37185; Invitrogen), MT-ND3 (1 : 1000, cat #ab192306; Abcam), MT-ND4 (1 : 1000, cat #ab219822; Abcam), MT-ND4L (1 : 1000, cat #PA5-103953; Invitrogen), MT-ND5 (1 : 1000, cat #ab230509; Abcam), MT-ND6 (1 : 1000, cat #PA5-109993; Invitrogen), GPX1 (1 : 1000, cat #ab22604; Abcam), MnSOD (1 : 1000, cat #ab68155; Abcam), CuMnSOD (1 : 1000, cat #ab13498; Abcam), PRDX1 (1 : 1000, cat #NBP1-82558; Novus), PRDX3 (1 : 1000, cat #NBP2-67043; Novus), PRDX6 (1 : 1000, cat #H00009588-M01; Novus), and α-tubulin (1 : 1000; cat# AF0001; Beyotime, China).
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2

Western Blot Analysis of OXPHOS and Mitochondrial Dynamics

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Equal amounts of protein (15 μg) were separated by SDS-PAGE on a 12% gel. The proteins were transferred onto a polyvinylidene difluoride membrane (BIO-RAD, #1704273, Hercules, CA). The membrane was incubated overnight with primary antibodies against total rodent OXPHOS (ab110413, Abcam), MT-NDI (ab181848, Abcam), OPA1 (ab42364, Abcam), DRP1 (ab56788, Abcam), MFN1 (ab104274, Abcam), MFN2 (ab56889, Abcam) and β-actin (sc47778, Santa Cruz Biotechnology) and incubated for 1 h with HRP-conjugated secondary antibodies (#32430 and #32460, Invitrogen or Thermo Scientific). The protein bands were detected using the enhanced chemiluminescent plus system.
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3

Mitochondrial Protein Expression Analysis

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Muscle biopsies and cybrid cells were lysed in cell lysis buffer (Beyotime, China). 30‐50 mg protein were run on a 8‐12% sodium dodecyl sulfate‐polyacrylamide gel (SDS–PAGE) at 100 V, 2‐3 h. Proteins were transferred to PVDF (Immobilon‐P PVDF‐Membrane, Millipore, Burlington, MA, USA) for 1‐3 h at 100 V, 4°C. After blocking with 5% dried skimmed milk, the membrane was incubated with various primary antibodies. Primary antibodies were as follows: total OXPHOS antibody cocktail (ab110413, Abcam), anti‐CO4 (CST 4805s, Cell Signaling Technology), anti‐GAPDH (10494‐1‐AP, Proteintech), anti‐ND5 antibody(ab92624, Abcam), anti‐ATP6 antibody (ab192423, Abcam), anti‐ND1 antibody (ab181848, Abcam), Anti‐CYB antibody (ab81215, Abcam), Anti‐VDAC1/Porin antibody (ab158995, Abcam), Anti‐β actin antibody (TA‐09, Zhongshan Jinqiao).
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4

Mitochondrial Protein Analysis by Western Blot

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Western blotting analysis was performed as detailed previously.32 (link) Antibodies used in this study include anti-YARS2 (ab228957, at a dilution of 1:1000), anti-MT-ND1 (ab181848, at a dilution of 1:2000), anti-MT-ND5 (ab230509, at a dilution of 1:1000), anti-MT-CO2 (ab79393, at a dilution of 1:5000), and anti-TOM20 (ab186735, at a dilution of 1:2000) from Abcam, anti-MT-ND6 (PA5-43532, at a dilution of 1:1000) and anti-MT-ND4 (PA5-97298, at a dilution of 1:1000) from ThermoFisher, anti- MT-CYTB (55090-1-AP, at a dilution of 1:1000) from Proteintech, anti-β-actin (AF5003, at a dilution of 1:2000) from Beyotime Institute of Biotechnology, and HRP-conjugated anti-rabbit secondary antibody (A0208, at a dilution of 1:1000) from Beyotime Institute of Biotechnology. Immunoreactive proteins were visualized using a chemiluminescent immunodetection system (ChemiDoc XRS). Image J was employed to analyze the grayscale values obtained by western blotting.
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5

Mitochondrial Protein Analysis by Western Blot

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Total protein was extracted from cybrids using the EzRIPA Lysis Kit (ATTO, Tokyo, Japan). SDS-PAGE was performed using NuPAGE 4–12% Bis-Tris gels (Thermo Fisher Scientific) and MOPS Running Buffer (Thermo Fisher Scientific). Then, the proteins were transferred to PVDF membrane. After blocking with a PVDF Blocking Reagent (TOYOBO, Osaka, Japan), membranes were incubated with the following primary antibodies: anti-NDUFA9 (ab14713, Abcam, Cambridge, UK), anti-MT-ND1 (ab181848, Abcam), anti-SDHA (#11998, Cell Signaling Technology), anti-COX IV (#4850, Cell Signaling Technology), anti-MT-COI (ab14705, Abcam), anti-Hsp60 (#12165, Cell Signaling Technology), anti-mtHsp70 (#3593, Cell Signaling Technology), anti-Tid1 (#4775, Cell Signaling Technology), anti-Lonp1 (NBP1-81734, Novus Biologicals, Littleton, CO), and anti-α–Tubulin (T-5168, Sigma-Aldrich). All primary antibodies described above were used at 1:1000 dilution. As the secondary antibodies, horse radish peroxidase-linked anti-mouse IgG (at 1:3000, #7076, Cell Signaling Technology) or anti-rabbit IgG (at 1:3000, #7074, Cell Signaling Technology) was used. The membranes were then incubated with ECL substrate (Thermo Fisher Scientific). Signal detection and quantification were performed using the ImageQuant LAS4000 (GE Healthcare) and MultiGauge software (FUJIFILM, Tokyo, Japan).
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6

Western Blot Analysis of OXPHOS Proteins

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Equal amounts of protein (15 g) were separated by SDS-PAGE on a 12% gel. The proteins were transferred onto a polyvinylidene difluoride membrane (BIO-RAD, #1704273, Hercules, CA). The membrane was incubated overnight with primary antibodies against total rodent OXPHOS (ab110413, Abcam), MT-NDI (ab181848, Abcam) and -actin (sc47778, Santa Cruz Biotechnology) and incubated for 1 h with HRP-conjugated secondary antibodies (#32430 and #32460, Invitrogen or Thermo Scientific). The protein bands were detected using the enhanced chemiluminescent plus system.
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