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4 protocols using anti mir 26a

1

Synthetic RNA Oligonucleotides for Cellular Manipulation

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Synthetic, chemically modified short single- or double-stranded RNA oligonucleotides: miR-26a mimics, miR-26a control (Ctrl), anti-miR-26a, anti-miR-26a Ctrl, p68 siRNA (sip68), p53 siRNA (sip53), and EZH2 siRNA (siEZH2) were synthesized from Shanghai GenePharma Co., Ltd. Commercial miR-26a expression Lentivirus and counterpart control vector were purchased from Shanghai GenePharma Co., Ltd. Commercial p68 expression plasmid and sh.p53 plasmid carrying small hairpin RNA targeting p53 were purchased from Shanghai Gene-Chem Co., Ltd. Commercial mutp53 expression plasmids and wild-type p53 expression plasmid were constructed and provided by GuangZhou Biosicen Biotechnology CO., Ltd. All oligonucleotide sequences are listed in supplementary table 1.
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2

Antibody-based Protein and miRNA Analysis

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Antibody against ERα was from Santa Cruz (Santa Cruz, CA, USA), antibody against α-tubulin from Sigma (St Louis, MO, USA). All other reagents were from Sigma. Anti-miR-26a and nonsense of anti-miR were from GenePharma (Shanghai, PR China). Cel-miR-39 mimics were from IBS (Shanghai, PR China).
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3

Transfection of Oral Cancer Cells

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Cal27, SCC4 and SCC9 cells as well as 293T cells were obtained from ATCC (Manassas, VA, USA). UM1 cells were purchased from Japanese Collection of Research Bioresources (JCRB) cell bank (Osaka, Japan), and normal human oral keratinocyte (NHOK) was supplied by ScienCell Research Laboratories (San Diego, CA, USA). Above cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM, PAN Biotech, Aidenbach, Germany) added with fetal bovine serum (FBS; 10%, HyClone, Logan, UT, USA) at 37 °C with 5% CO2.
Mimic of miR-26a (miR-26a) or miR-26b (miR-26b) and the mimic negative control (miR-NC), inhibitors of miR-26a (anti-miR-26a) or miR-26b (anti-miR-26b) and the inhibitor negative control (anti-miR-NC) and pcDNA-PAK1 (PAK1) were acquired from GenePharma Co., ltd. (Shanghai, China). And the pcDNA empty vector (pcDNA) was purchased from Thermo Fisher Scientific (Waltham, MA, USA). SCC4 and Cal27 cells were sowed into 6-well plates (about 2 × 106 cells/well) and transfected with aforementioned nucleotides or plasmids when confluence reached 70–80% using Lipofectamine 2000 (Life Technologies Corporation, Carlsbad, CA, USA) referring to manufacturer’s recommendations.
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4

MALAT1-miR-26a Interaction in HLECs

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Small interfering RNAs (siRNAs) targeting MALAT1, including siMALAT1-1and siMALAT1-2, were obtained from GenePharma (Shanghai, China). Primary HLECs were transfected with 100 nM MALAT1 siRNAs or negative control siRNA [si-control] individually for 24 h. The siRNA sequences are shown in Table 1.
In addition, miR-26a mimics, anti-miR-26a, miR-26a mimics negative control, and anti-miR-26a negative control were obtained from GenePharma. The primary HLECs were transiently transfected with 100 nM miR-26a mimics or anti-miR-26a or negative control for 6 h using GenePORTER transfection reagent (GTS, Inc., San Diego, CA, USA).
The MALAT1 sequence was subcloned into the HindIII and EcoRI sites of pcDNA3.1 (Invitrogen, Carlsbad, CA, USA) vector, named pcDNA3.1-MALAT1. The MALAT1 sequence binding miRNA-26a response elements were mutated in which 5'-CUUGUUAUUUUUUACUUGA-3' changed to 5'-ACCACCCCCCCCCCACCAC-3'. The pcDNA3.1-MALAT1 with mutations was named pcDNA3.1-MALAT1-mut (miRNA-26a). The primary HLECs were transfected with pcDNA3.1-MALAT1 and pcDNA3.1-MALAT1-mut in order to achieve the ectopic expression of MALAT1. The primary HLECs were transfected with an empty pcDNA3.1 vector used as a control.
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