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26 protocols using panc 1

1

Cancer Cell Line Characterization

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AGS (gastric cancer), MKN1 (gastric cancer), SNU1197 (colon cancer), AsPC1 (pancreatic cancer), PANC1 (pancreatic cancer), and Hek293 (normal kidney) cell lines were obtained from the Korean Cell Line Bank (Seoul, Korea). Antibiotics (penicillin/streptomycin), fetal bovine serum (FBS), and Roswell Park Memorial Institute (RPMI)-1640 cell culture growth medium were purchased from Gibco (Thermo Fisher Scientific). Bio-Rad Laboratories Inc. Provided the chemicals and materials used for electrophoresis. EZ-CYTOX cell viability, proliferation, and cytotoxicity assay kits were purchased from Do Gen Bio (Korea). Antibodies specific for ERK, pERK, S6, pS6, PARP, and KRAS were acquired from Cell Signaling Technology (Danvers, MA, USA). Santa Cruz provided the AKT and pAKT antibodies and β-actin.
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2

Profiling Biotin Receptor Expression

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Twelve biotin receptor-positive cell lines; human lung carcinoma cells (A549), human cervical cancer cells (HeLa), human breast cancer cells (MCF7, MDA-M231), human liver cancer cells (HepG2, Huh7, Hep3B), human prostate cancer cells (Du145, PC3), human gastric cancer cells (NCI-N87, AGS), human pancreatic cancer cell (Panc-1), and a biotin receptor-negative cell: human normal embryonal kidney epithelial cell (293T) were purchased from the Korean Cell Line Bank (Seoul, Republic of Korea). Two more biotin receptor-negative normal cell lines, human normal fibroblast cells obtained from fetal lung (WI-38 cells) or neonatal foreskin (BJ) cells were purchased from the Korean Cell Line Bank (Seoul, Republic of Korea) or Modern Cell & Tissue Technologies (MCTT, Seoul, Republic of Korea). The cells were cultured in either Roswell Park Memorial Institute medium (RPMI-1640, GIBCO BRL, Grand Island, NY, USA) or Dulbecco’s Modified Eagle’s Medium (DMEM, GIBCO BRL) supplemented with 10% fetal bovine serum (FBS, GIBCO), and 1% penicillin and streptomycin (GIBCO), at 37 °C in a humidified atmosphere containing 5% of CO2. When the cell density reached 70–80% of confluence, subculturing was considered complete. The medium was changed approximately every 3 to 4 days.
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Human Pancreatic Cancer Cell Lines

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Human pancreatic cancer cell lines Capan-1 (adenocarcinoma, liver metastasis) and PANC-1 (epithelioid carcinoma) were purchased from Korean Cell Line Bank (KCLB, Seoul, Korea). KCLB characterized the cell lines using DNA fingerprinting analysis, species verification test, mycoplasma contamination test and viral contamination test. Human pancreatic cancer cell lines, Capan-2 (adenocarcinoma) and CFPAC-1 (adenocarcinoma, liver metastasis), were purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA). The cell lines were characterized by the tests for morphology, post-freeze viability, interspecies determination (isoenzyme analysis), cytogenetic analysis, mycoplasma contamination and bacterial and fungal contamination. Capan-1 cells were cultured with RPMI-1640 medium (Thermo Fisher Scientific, Waltham, MA, USA), Capan-2 cells in McCoy’s 5A medium (Thermo Fisher Scientific), PANC-1 cells in Dulbecco’s modified Eagle’s medium (DMEM, Thermo Fisher Scientific) and CFPAC-1 cells in Iscove’s modified Dulbecco’s medium (IMDM, Thermo Fisher Scientific). All cell lines were cultured with 10% fetal bovine serum (FBS, Thermo Fisher Scientific), 100 U/mL penicillin and 100 µg/mL streptomycin and were incubated at 37 °C in 5% CO2.
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4

Isolation and Characterization of CD133+ Pancreatic Cancer Cells

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Human pancreatic cancer cell lines, PANC1 and AsPC1 were obtained from Korea Cell Line Bank and maintained in RPMI1640 medium (WELGENE, Daegu, Korea) containing 10% heat-inactivated fetal bovine serum (Life Technologies, Grand Island, NY, USA) and antibiotics (100 U/ml of penicillin and 100 μg/ml streptomycin; Life Technologies). They were incubated at 37°C and 5% CO2. AsPC1 cells were cultured, and stained with anti-CD133 antibody (Miltenyi Biotec, Bergisch Gladbach, Germany) for 15 min on ice with rotation. Followed by washing with a buffer (phosphate buffered saline (PBS) containing 1% bovine serum albumin (BSA) and 0.01% sodium azide) twice, CD133+ AsPC1 cells were isolated by FACSAria (BD Bioscience). Isolated CD133+ AsPC1 cells were incubated in CO2 incubator, and subcultured for tumor xenograft.
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5

Measuring PDAC Cell Viability by MTT Assay

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Human PDAC cell lines (PANC-1, MIA PaCa-2, Capan-1, and Capan-2) and normal pancreatic ductal epithelial cell lines (H6c7) were purchased from the Korean Cell Line Bank (Seoul, South Korea) and Kerafast (Boston, MA, USA), respectively. PDAC cell lines were cultured in DMEM (PANC-1 and MIA PaCa-2) or RPMI-1640 medium (Capan-1 and Capan-2) supplemented with 10% FBS and 1% penicillin/streptomycin. H6c7 cells were maintained in keratinocyte serum-free medium supplemented with rEGF and BPE. All the cells were incubated at 37 °C under a 5% CO2. For measurement of cell viability, cells were seeded in 96-well plate in 1% FBS containing media. After cells were treated with vehicle or drugs for 48 h, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (Merck, Burlington, MA, USA) dye solution was added. After 4 h, the solution was removed, and dimethyl sulfoxide was added to dissolve the formazan crystal. The absorbance was measured at 540 nm using a microplate reader (Versamax, Molecular Devices, Inc., San Jose, CA, USA).
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6

Gastric Cancer Samples and Cell Lines

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A total of 60 frozen gastric cancer samples were obtained from the Chonnam National University Hwasun Hospital (Hwasun, Korea) and supported by the Ministry of Health, Welfare, and Family Affairs. Informed written consent was obtained from all subjects according to the Declaration of Helsinki, and the study was approved by the Institutional Review Board of the Catholic University of Korea, College of Medicine (MC15SISI0015). Tissue sample information is summarized in Table 1. There was no evidence of familial cancer in any of the patients. The human gastric cancer cell lines MKN-1, MKN-45, AGS, SNU-1, SNU-5, and SNU-16, and other cancer-cell lines, including A549 (lung cancer), MDA-MB231 (breast cancer), PANC-1 (prostate cancer), and SW480 (colon cancer), were obtained from the Korea Cell-line Bank (KCLB, Korea).
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7

Characterization of Pancreatic Cancer Cell Lines

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Human pancreatic cancer cell lines (AsPC-1, Capan-1, Capan-2, Panc-1, SNU-213, SNU-324, and SNU-410) were purchased from the Korean Cell Line Bank (KCLB, Seoul, Korea). A human kidney cell line (293T) was obtained from the American Type Culture Collection (Manassas, VA). The cells were grown in DMEM (Panc-1 and 293T) or RPMI 1640 (AsPC-1, Capan-1, Capan-2, SNU-213, SNU-324, and SNU-410) medium supplemented with 10% fetal bovine serum (Gibco-BRL, Gaithersburg, MD, USA), 1 × 105 unit/L penicillin, and 100 mg/L streptomycin (Invitrogen, Carlsbad, CA, USA) at 37 °C in a humidified atmosphere containing 5% CO2. Polyclonal antibodies for DUSP28 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA) and monoclonal antibodies for DUSP28 were purchased from Calbiochem (La Jolla, CA). Antibodies for caspase-3, cleaved caspase-3, phospho-ERK (Thr202/204), ERK, phospho-AKT (Ser473), AKT, and GAPDH were purchased from Cell Signaling Technology (Beverly, MA, USA). Doxorubicin and gemcitabine were from Sigma-Aldrich (St. Louis, MO, USA). U0126 and U0124 were purchased from Calbiochem (La Jolla, CA).
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8

Cytotoxicity Assessment of Nanoparticles on Cancer Cells

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Cell culture and cytotoxicity was conducted according to our previous report [43 (link),44 (link)]. Three cancer cell lines (AGS, HT-29 and PANC-1) were purchased from the Korean Cell Line Bank (Seoul, Republic of Korea). Cells were grown in high-glucose DMEM supplemented with penicillin (100 units/mL), streptomycin (100 μg/mL) and 10% FBS. Then, the cells were incubated at 37 °C (under 5% CO2) and preserved at approximately 80% confluence prior to trypsin/EDTA treatment. Each cancer cell line was seeded on 96-well plates with a density of 5.0 × 103 cells per well. Then, the incubation was performed for 24 h in a 37 °C incubator under CO2 (5%). Five different concentrations of each nanoparticle solution (50.0, 25.0, 12.5, 6.25, and 3.12 μM Au or Ag) were treated on the cells [43 (link),44 (link)], and the treated cells were incubated in a 37 °C incubator for an additional 24 h under CO2 (5%). The cells that were not treated were used as a control. Next, an MTT reagent (10 μL, 5% in deionized water) was added, and the incubation was conducted for an additional 3 h in a 37 °C incubator under CO2 (5%). A multi-detection microplate reader was used to record the absorbance at 570 nm (Synergy HT, Bio Tek Instruments, Winooski, VT, USA). All cytotoxicity experiments were performed in triplicates.
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9

Cell Culture and Compound Preparation

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Fetal bovine serum (FBS), antibiotics (penicillin/ streptomycin), and Dulbecco’s phosphate buffered saline (DPBS) were purchased from Gibco BRL (Invitrogen Corp., Carlsbad, CA, USA). L929 cells (mouse connective tissue normal cell line, KCLB no.10001), A549 (human lung carcinoma cell line, KCLB no.10185), PANC-1 (human pancreas carcinoma cell lines, KCLB no.21469), and HCT116 (human colon carcinoma cell line, KCLB no.10247) were obtained from the Korean Cell Line Bank (KCLB). L929, PANC-1 cells were cultured in DMEM (Dulbecco Modified Eagle Medium) and A549, HCT116 cells were cultured in RPMI 1640 (Roswell Park memorial Institute 1640 Medium) supplemented with 10% FBS and 1% penicillin/ streptomycin. Cells were cultured at 37 °C in 5% CO2 and changed fresh medium every 2 to 3 days. PuC and OPuC were dissolved in DMSO and diluted in serum-free (SF) medium until the DMSO concentration reached under 0.1%. All reported concentrations referred to free Ce6 equivalents. Untreated cells were kept in the dark and used as a reference standard.
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10

PANC-1 Cell Line Culture Protocol

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The human pancreatic cancer cell line PANC-1 was obtained from the Korean Cell Line Bank (KCLB Cat# 21469) and grown in DMEM (Welgene, Daegu, Korea) supplemented with 10% heat-inactivated fetal bovine serum (FBS, Welgene, Daegu, Korea) and 1% penicillin‒streptomycin solution (Gibco, Thermo Fisher, Waltham, MA, USA). Cells were cultured at 37 °C and 5% CO2 in a humidified incubator.
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