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8 protocols using acetonitril

1

Tobramycin Nanoemulsion Formulation

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Tobramycin (TOB) was a gift sample from Welmark Pharmaceuticals (Hattar, Pakistan). Docusate sodium (DOC), sodium dodecanoate (DOD), Propylene glycol and acetonitril were obtained from Sigma-Aldrich (Darmstadt, Germany). Peceol (glycerol monooleate, HLB = 3), Cremophor RH (castor oil, hydrogenated, ethoxylated) and Maisine 35–1 (glycerol monolinoleate, HLB = 1) were a gift from Gattefossé (Lyon France).
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2

Lipid Extraction and LC-MS/MS Analysis

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Cell pellets were thawed and transferred from Eppendorf tube into degreased glass tubes (100 x 10 mm) using 3 x 0.5 ml of methanol. After each addition of methanol, cell pellet was homogenized by sonication in a water bath. Following this procedure, 0.75 ml of chloroform and 0.3 ml of water were added into tube; its content was dispersed using a probe sonicator and extraction process continued at RT overnight. The monophase extraction system was dried by nitrogen at room temperature. For reconstitution of lipids, 0.3 ml of solvent mixture (methanol/chloroform 1/1 vol. %) was used. This concentrated extract was then used for liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis of lipids, performed using Agilent 1200 high performance liquid chromatography (HPLC) System (Agilent, Santa Clara, CA, USA) and mass spectrometer TripleQuad 6410, equipped with electrospray ionization (ESI) and atmospheric pressure photoionization (APPI), respectively (Agilent). Methanol, chloroform, acetonitril, hexane, isopropanol, formic acid, ammonium formate were purchased from Sigma-Aldrich; HPLC columns Supelcosil LC SI–(250 mm x 2.1 mm; 3 μm), Supelcosil LC DIOL (250 mm x 3 mm; 5 μm) were used for lipid separation.
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3

Extraction of Fructooligosaccharides from Defatted Rice Bran

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Defatted rice bran was provided by Wilmar Agro Vietnam (Can Tho, Vietnam). Cellulase preparation was provided by Novozymes (Bagsvaerd, Denmark) and delivered by Trung Son Technology (Ho Chi Minh City, Vietnam). The cellulase preparation is in brown color, noted with an activity of 700 EGU/g and the best-storing temperature of 4 °C. Standard FOS set, including GF2, GF3, and GF4, with a purity 99% was purchased from Fujifilm Wako Pure Chemical Corporation (Osaka, Japan). Acetonitril, water, and methanol for UPLC analysis were from Merck (Darmstadt, Germany).
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4

Extraction and Quantification of Polyphenols

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Methanol, phosphoric acid, chloroform, acetonitril and sodium chloride were purchased from Merck Company (India) nn. Ethyl acetate was purchased from Sinopharm Chemical Reagent Company (China). Polyphenol standards: (+) - catechin, (−) - epicatechin, Gallic acid, vanillic acid, para coumaric acid, ferullic acid, ortho coumaric acid and tyrosol were purchased from Sigma-Aldrich Corporation (Germany). Cholesterol powder was purchased from Solvay Duphar Co., Belgium.
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5

Analytical Standards of Tetracycline Antibiotics

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Analytical standards of tetracycline antibiotics, including tetracycline hydrochloride, oxytetracyclin hydrochloride, chlortetracyclin hydrochloride and doxycyclin hydrochloride, were provided from Alderck Company. Analytical grade chemicals including acetic acid, sodium chloride, oxalic acid, citric acid, ethylene-diaminetetraacetic acid (EDTA) and disodium hydrogen phosphate (Na2HPO4) were provided from Merck, Germany. Methanol and Acetonitril of HPLC grade were also from Merck-Germany. Solid phase extraction cartridges (500 mg, 6 ml) were provided from Macherey-Nagel Company (Germany).
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6

Quantification of Purine Metabolites

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6-Mercaptopurine, 6-methylmercaptopurine and 5-fluorouracil were acquired from Sigma-Aldrich (Saint Louis, MO, USA). 6-Thioguanosine-5′-monoposphate (6-TGMP; Figure 1C) was acquired from Jena Bioscience (Löbstedter, Jena, Germany). Acetonitril and methanol high performance liquid chromatography (HPLC)-grade from Merck (Kenilworth, NJ, USA). All water was HPLC-grade and prepared using a Millipore Direct-QTM 5 water system (Millipore, Watford, Hertfordshire, UK). Whole blood was acquired from the Indonesian Red Cross.
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7

Amphotericin B Nanoparticle Synthesis

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Amphotericin B, galactosamine, polyethylene glycol (PEG), 4-dimethylaminopyridine (DMAP), ethylene dichloride (EDC), dimethyl sulfoxide (DMSO), dichloromethane (DCM), acetone, succinic anhydride, and acetonitril were obtained from Merck (Germany). PLGA (50:50 D, L-lactide:glycolide) and polyvinyl alcohol (PVA) were obtained from Purac (Gorinchem, the Netherland) and Acros (Acros Organics, Geel, Belgium), respectively.
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8

Synthesis and Screening of Neuropeptide Y Receptor Ligands

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All Fmoc-amino acids and Oxyma Pure were purchased from Protein Technologies (now Gyros Technologies) or Novabiochem, Merck. Fmoc-L-Glu-Otbu (γGlu), Fmoc-L-Lys(Mtt)-OH and Fmoc-L-Lys(ivDde)-OH were obtained from Iris biotech (Germany). Dimethylformamide (DMF) was from Solvias (Switzerland). Fmoc-8-amino-3,6-dioxaoctanoic acid (Fmoc-Ado-OH) was purchased from Flamma Group, Italy. 20-(tert-Butoxy)-20-oxooctadecanoic acid (C20-diacid), 18-(tert-Butoxy)-18-oxooctadecanoic acid (C18-diacid), (16-(tert-Butoxy)-16-oxooctadecanoic acid (C16-diacid) and 14-(tert-Butoxy)-14-oxooctadecanoic acid (C14-diacid) were purchased from Solvias. Fmoc-PAL-resin, trifluoroacetic acid, diethylether, piperidine, acetonitril, hydrazine and triisopropylsilan were from Merck. 5(6)-TAMRA (AS-81120) was purchased from Anaspec (USA). All buffers and salts for in vitro were purchased from Sigma Aldrich. ActOne assay: Human embryonic kidney (HEK) 293 cells stably expressing the cAMP sensitive calcium channel and one of the human Y1R, Y2R, and Y4R (Cat # CB 80300-244, CB 80300-245, CB 80300-270, Codex Bio-solution, Gaithersburg, MD, USA). SPA assay: CHO cells stably expressing the human Y2R (Cat # CG1274, Multispan, Hayward, CA, USA).
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