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2 protocols using collagenase 1

1

Isolation and Culture of CD271+ CAFs

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GC tissues were obtained from patients undergoing surgery at the Affiliated Hospital of Jiangnan University (Wuxi, China). Tissues were minced (1 to 2 mm pieces) and digested with DMEM/F12 (Gibco, New York, USA) containing 10% FBS, 2 mg/mL collagenase I and 2 mg/mL hyaluronidase (Beyotime, Nantong, China) at 37 °C for 2 h. The homogenate was centrifuged at 3000 rpm for 15 min in 437 °C, and the resulting adherent cells were digested again. CD271-positive CAFs were isolated using the CD271 MicroBead Kit (APC, Mainz, Germany) according to the manufacturer's instructions, and cultured in DMEM/F12 medium until 100% confluent.
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2

Comprehensive Immune Cell Profiling in Tumor Samples

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Fresh tumor and spleen samples were minced, treated with 200 U/ml Collagenase I (Cat#ST2294, Beyotime Biotechnology), and filtered with a 100 μm filter to make a suspension of single cells. 2 × 106 (link) Cells were stained at 100 μl in PBS. Single-cell suspension is stained with the following antibodies: Live/Dead Fixable Violet Dead Cell (Cat# 2549272, Invitrogen), anti-CD3 (Cat# 100236, Biolegend), anti-CD4 (Cat# 100406; 100408, Biolegend), anti-CD8 (Cat# 100706, Biolegend), anti-Ki67 (Cat# 652425, Biolegend), anti-IFN-γ (Cat# 505860, Biolegend), anti-Perforin (Cat# 154306, Biolegend), anti-Foxp3 (Cat# 126404, Biolegend), anti-CD11b (Cat# 101212, Biolegend), anti-CD11c (Cat# 117352, Biolegend), anti-Gr-1(Cat# 108406, Biolegend), anti-TIM-3(Cat# 119727, Biolegend), anti-LAG-3 (Cat# 125241, Biolegend) and anti-PD-1 (Cat# 135227, Biolegend). Surface antigens were detected by NovoCyte Quanteon (Agilent) after staining with antibodies for 30 minutes in the dark. To detect intracellular cytokines, the samples were fixed with Fixation/Permeabilization Solution KiT (Cat# 554714, BD Biosciences) and incubated with intracellular antibodies for 30 minutes before running the machine. Datas were analyzed by NovoExpress.
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