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Biomark hd 96 96 dynamic pcr array

Manufactured by Standard BioTools
Sourced in United States

The Biomark HD 96 × 96 dynamic PCR array is a high-throughput real-time PCR system designed for gene expression analysis. It enables simultaneous measurement of up to 9,216 individual real-time PCR reactions in a single run.

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2 protocols using biomark hd 96 96 dynamic pcr array

1

Quantifying Serum Inflammation Proteins

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Serum samples were stored at – 80 °C within 4 h of sampling until use. Serum levels of 180 unique inflammation and immune response–related proteins (supplementary Table S1) were measured using proximity extension immunoassay (PEA; Olink Proteomics, Uppsala, Sweden) [22 (link)], using the ProSeek Multiplex Inflammation and Immune Response kits.
Briefly, the proximity extension immunoassay technology is based on dual recognition of serum proteins by pairs of antibodies coupled to a cDNA-strand that ligates when brought into proximity by its target. This DNA tag is PCR amplified and detected using a Biomark HD 96 × 96 dynamic PCR array (Fluidigm, San Francisco, USA). After corrections from DNA extension- and interpolation controls, a normalized protein expression value (NPX) is generated on a log-2 scale.
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2

Plasma Protein Profiling by PEA

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For analysis, 20 μl of frozen (−80 °C) plasma samples were thawed and sent to Olink Proteomics. In proximity extension assays, plasma proteins were dually recognized by pairs of antibodies coupled to a cDNA strand that ligates when brought into proximity to its target, extended by a polymerase and detected using a BioMark HD 96 × 96 dynamic PCR array (Fluidigm). The quantification cycle (Cq) values from a DNA extension control are subtracted from the measured Cq value, an interpolate control is corrected for, and finally a correction factor is subtracted to yield a normalized protein expression value, which is log2-transformed.
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