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102 protocols using diaphot

1

Patch-Clamp Recordings of Calcium Currents

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All experiments were performed in a small chamber mounted on the stage of an inverted phase-contrast microscope (Diaphot; Nikon). A video system (Diaphot; Nikon) made it possible to inspect the cells and the pipettes throughout the experiments. The electrical measurements were carried out using the patch-clamp technique in a whole cell configuration with an Axon (model 200B) patch-clamp amplifier and Digidata 1440A (Molecular Devices, CA, USA). Series resistance originated from the tips of the micropipettes was compensated electronically at the beginning of the experiment. Membrane currents sampled at 10 kHz were filtered at 2 kHz, and digitized using pClamp10 software (Axon Instruments). The leak currents were digitally subtracted by the P/N method (n 14 5–6). Experiments performed without leak subtraction indicated low and stable leak currents. Current/voltage curves were obtained by applying voltage steps in 8-mV increments from a holding potential of −40 mV. All current recordings were obtained after ICa had been stabilized. The peak inward calcium current was measured in the same cell before and after intracellular dialysis of renin (100 nM). Values of calcium currents were normalized for cell capacitance.
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2

Electrophysiological Characterization of Cardiac Myocytes

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The myocytes were placed in a cell chamber mounted on the stage of an inverted microscope (Nikon Diaphot), and allowed to settle for 5 min before they were superfused with Tyrode’s solution containing 1.8 mM CaCl2 and 1 mM MgCl2. Single myocytes having smooth surfaces with cross striations were selected for electrophysiological measurements. APs were recorded using an Axopatch 200B amplifier (Molecular Devices, Sunnyvale, CA, United States). Data acquisition, voltage control, and analysis were accomplished using custom software. All potentials were corrected for the estimated liquid junction potential (Barry and Lynch, 1991 (link)). Pipettes (resistance 2–3 MΩ) were pulled from borosilicate glass capillaries (Harvard Apparatus, United Kingdom) using a custom-made vertical microelectrode puller. Cell membrane capacitance (Cm) was estimated by dividing the time constant of the decay of the capacitive transient in response to 5 mV hyperpolarizing voltage clamp steps from −40 mV by the series resistance. Average Cm was 114 ± 9 pF (n = 58; mean ± SEM). Signals were low-pass filtered with a cut-off frequency of 5  kHz and digitized at 40  kHz.
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3

Apoptosis Assay using Dye Staining

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Apoptotic cells were determined using differential dye staining, based on the cell membrane's integrity to uptake fluorescent DNA binding dyes, ethidium bromide and acridine orange. We exposed rMC-1 grown on coverslips in N or HG medium for 7 days to a dye mixture containing 25 μg/mL ethidium bromide (Sigma-Aldrich Corp.) and 25 μg/mL acridine orange (Sigma-Aldrich Corp.) for 10 minutes, washed with PBS, fixed and mounted in a commercial reagent (SlowFade Antifade Kit; Invitrogen, Eugene, OR, USA). The cells were then visualized with a DAPI filter and at least 10 random fields were imaged using a digital camera attached to a fluorescence microscope (Diaphot; Nikon Corp.). The number of apoptotic cells per field was expressed as a percentage of the total number of cells in the field. Apoptotic cells appear orange or bright green while viable cells appear uniformly dark green.
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4

Senescence Assessment in HCT116 Cells

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Senescence was assessed by SA-β-gal staining of HCT116 cells transfected with indicated mimics or expression vectors. After 24hrs post transfection the cells were cultured in complete and serum free media followed by staining using senescence β-galactosidase staining Kit (Cell Signaling, Danvers, MA) following manufacturer's instructions. Briefly, the cells were rinsed with PBS and fixed (2% formaldehyde, 0.2% glutaraldehyde in PBS) for 15 min at room temperature and washed twice with PBS. The cells were incubated with fresh β-galactosidase staining solution at pH 5.8 and incubated at 37°C for overnight. SA-β-galactosidase positive cells were detected by inverted bright field microscopy (Nikon Diaphot) at 100x magnification.
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5

Electrophysiological Characterization of Cardiac Progenitor Cells

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The Hcn2 and SkM1 currents (IHcn2 and ISkM1, respectively) were measured in the whole-cell configuration of the patch-clamp technique using an Axopatch 200B amplifier (Molecular Devices Corporation, Sunnyvale, CA, United States). CPCs were harvested, stored in SP++ medium at room temperature (20°C), and studied within 4 h. Cell suspensions were put into a recording chamber on the stage of an inverted microscope (Nikon Diaphot), and single CPCs that visibly formed branches with the bottom of the recording chamber and exhibited green fluorescence were selected for electrophysiological measurements. Voltage control, data acquisition, and analysis were accomplished using custom software. Potentials were corrected for the estimated change in liquid-junction potential (Barry and Lynch, 1991 (link)). Signals were low-pass filtered with a cut-off frequency of 5 kHz and digitized at 5 and 20 kHz for IHcn2 and ISkM1, respectively. Series resistance was compensated by ≥80%. Cell membrane capacitance (Cm) was calculated by dividing the time constant of the decay of the capacitive transient after a −5 mV voltage step from −40 mV by the series resistance, and amounted to 24.8 ± 2.5 pF (n = 18).
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6

Multimodal Optical Analysis Methods

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Fluorescent/luminescent measurement was performed on an Agilent Cary Eclipse fluorescence spectrophotometer. Optical absorbance was measured on a Multiskan GO microplate reader. Microscopic images were taken under a Nikon Diaphot inverted tissue culture microscope with Optronics MicroFire microscope camera (Nikon Precision Inc, Belmont, CA).
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7

Patch-Clamp Recording of hERG Channel Mutants

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Glass shards containing plated cells were placed in a recording chamber mounted on an inverted microscope (Nikon Diaphot, USA). The cells were continuously superfused with a pre-warmed (37 °C) standard Tyrode's solution containing (in mM) the following: 140 NaCl, 4 KCl, 2.5 CaCl2, 1 MgCl2, 10 Glucose, 5 HEPES (titrated to pH 7.4 with NaOH). A modified “High K+” version of this solution (containing 94 mM KCl and 50 mM NaCl) was used to elicit recordable currents from T623A, G648A and F656A hERG channels mutants [34,37] . Glass patch-pipettes (Schott #8250 glass, A-M Systems Inc., USA) were pulled (Narishige, PP 830) and polished (Narishige, MF 83) to obtain a final resistance between 2 and 4 MΩ. Patch-pipettes were dialysed with an intracellular solution containing (in mM) the following: 130 KCl, 1 MgCl2, 5 EGTA, 5 MgATP, 10 HEPES (titrated to pH 7.2 with KOH). All recordings were made using an Axopatch 200B amplifier (Axon Instruments, now Molecular Devices) and a CV203BU head-stage. Pipette resistance compensation was between 70 and 80%. Data were acquired using a Digidata 1320 interface (Axon Instruments, now Molecular Devices). Data digitization rates were 10–25 kHz during all voltage protocols and an appropriate bandwidth of 2–10 kHz was set on the amplifier.
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8

Cell Culture Imaging Protocol

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Cells were grown to confluence on tissue culture dishes. Images were obtained using a Nikon Diaphot microscope.
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9

Electrophysiological Recording of hERG Current

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For electrophysiological recording of hERG current (IhERG), glass shards containing plated cells were placed in a small recording chamber mounted on an inverted microscope (Nikon Diaphot, USA) and continuously superfused with a preheated (37°C) standard Tyrode's solution containing (in mmol/L): 140 NaCl, 4 KCl, 2.5 CaCl2, 1 MgCl2, 10 glucose, and 5 HEPES (titrated to pH 7.4 with NaOH).16 (link),19 (link) Patch‐pipettes (Schott #8250 glass; A‐M Systems Inc, USA) were pulled (Narishige, PP 830) and polished (Narishige, MF 83) to obtain a final resistance between 2 and 4 MΩ. The intracellular solution used to fill the patch‐pipettes contained (in mmol/L): 130 KCl, 1 MgCl2, 5 EGTA, 5 MgATP, and 10 HEPES (titrated to pH 7.2 with KOH).16 (link),19 (link) All hERG currents were recorded with an Axopatch 200B amplifier (Axon Instruments, now Molecular Devices) and a CV‐4/100 or CV203BU head‐stage. Pipette resistance compensation was between 70% and 80%. Data acquisition was performed through a Digidata 1320 (Axon Instruments, now Molecular Devices). Data digitization rates were 10 to 25 kHz during all protocols and an appropriate bandwidth of 2 to 10 kHz was set on the amplifier.
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10

Embryo Evaluation and Blastocyst Transfer

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Embryos were morphologically evaluated on days three and five of development
using an inverted Nikon Diaphot microscope with a Hoffmann modulation contrast
system (Eclipse TE 300 microscope, Nikon, Tokyo, Japan) under 400x
magnification.
The blastocyst development rate was defined as the number of embryos that reached
blastocyst stage at day five by the number of fertilized oocytes in each cycle.
On day 5, one to two embryos were transferred per patient, depending on maternal
age and embryo quality, using a soft catheter with transabdominal ultrasound
guidance.
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