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3 protocols using pierce precise protein gels

1

Western Blot Analysis of Autophagy Markers

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Protein was isolated from cells as described21 (link). Briefly, cell lysates were electrophoresed on 4-20% Pierce Precise Protein Gels (Thermo Scientific) and transferred to nitrocellulose membranes. Membranes were probed with the following primary antibodies: rabbit-anti-ATG16L1 (1:500, Sigma) guineapig-anti-p62 (1:1000, Progen Biotechnik, Heidelberg, Germany), rabbit anti-Caspase-1 (1:5000, Dr. Gabriel Nuñez), rat anti-Caspase-11 (1:250, Sigma), rat anti-NLRP3 (1:250, R&D systems), and rabbit-anti-GAPDH (1:1000, Cell Signaling Technology, Danvers, MA). Goat-anti-rabbit IgG-HRP, goat-anti-guinea pig IgG-HRP, and goat-anti-rat IgG-HRP secondaries (Santa Cruz Biotechnology, Dallas, TX) were used and detected by SuperSignal West Dura (Thermo Scientific).
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2

VACV Infection Impact on HEp-2 Cells

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For western blot analysis, HEp-2 cells were infected with VACVNYCBOH at an MOI of 0.2 and cultivated for 3 to 4 days. Cells were lysed using RIPA lysis buffer supplemented with the HALT Protease Inhibitor cocktail (Thermo Fisher Scientific) and protein concentrations were determined using a BCA protein assay kit (Thermo Fisher Scientific). A protein lysate from mock-infected HEp-2 cells was used as the negative control. Proteins were separated on 8 to 16% precast gradient PAA gels (Pierce Precise™ Protein Gels, Thermo Fisher Scientific) and blotted onto a 0.2 μm PVDF membrane (VWR, Darmstadt, Germany). A PageRuler™ pre-stained standard (Fermentas, St. Leon-Rot, Germany) was used as the molecular weight marker. Membranes were blocked in TBS-T supplemented with 5% skim milk (Carl Roth) at 4°C overnight. Primary antibodies were incubated for 1 h at RT diluted in TBS-T supplemented with 1% skimmed milk, as were HRP-labelled species-specific secondary antibodies. Detection was done via chemiluminescence after 5 min incubation with ECL western blotting substrate (Thermo Fisher Scientific).
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3

Western Blot Analysis of Autophagy Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was isolated from cells as described21 (link). Briefly, cell lysates were electrophoresed on 4-20% Pierce Precise Protein Gels (Thermo Scientific) and transferred to nitrocellulose membranes. Membranes were probed with the following primary antibodies: rabbit-anti-ATG16L1 (1:500, Sigma) guineapig-anti-p62 (1:1000, Progen Biotechnik, Heidelberg, Germany), rabbit anti-Caspase-1 (1:5000, Dr. Gabriel Nuñez), rat anti-Caspase-11 (1:250, Sigma), rat anti-NLRP3 (1:250, R&D systems), and rabbit-anti-GAPDH (1:1000, Cell Signaling Technology, Danvers, MA). Goat-anti-rabbit IgG-HRP, goat-anti-guinea pig IgG-HRP, and goat-anti-rat IgG-HRP secondaries (Santa Cruz Biotechnology, Dallas, TX) were used and detected by SuperSignal West Dura (Thermo Scientific).
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