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21 protocols using human igm

1

FcR Receptor Binding Assay

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Labeled antibodies: PE-conjugated anti-human FcγRI (clone 10.1, IgG1 isotype), anti-human FcγRII (clone FUN-2, IgG2b isotype), anti-humanFcγRIII (clone 3G8, IgG1 isotype), anti-human FcαRI (clone A59, IgG1 isotype), mouse IgG1 (clone MOPC-21) and mouse IgG2b (clone MPC-11) were purchased from Biolegend (San Diego, CA, USA).
Non-conjugated antibodies: anti-human FcγRI (clone 10.1, IgG1 isotype) anti-human FcγRII (clone AT10, IgG1 isotype) and anti-human FcγRIII (clone 3G8, IgG1 isotype), were obtained from Abcam (Cambridge, UK). Human IgG, human IgG1, human IgG2, human IgG3, human IgG4, human IgM, human IgA were purchased from Sigma-Aldrich, goat anti-human IgG fragment (GAH-IgG F(ab’)2) was obtained from Jackson Immunoresearch (West Grove, PA, USA).
LPS and bovine serum albumin (BSA) were purchased from Sigma-Aldrich. FcR blocking reagent obtained from Miltenyi Biotec (Bergisch Gladbach, Germany). Viral citrullinated peptide 2 (VCP2) was prepared by solid-phase peptide synthesis and characterized by MALDI-MS at the University of Florence. Hoechst 33342 stain was from Life Technologies/Thermo Fisher (Waltham, MA, USA).
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2

Extraction and Purification of Anti-MDA IgM

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IgM anti‐MDA was extracted according to previously described protocol.13 In short, MDA–human serum albumin, 1.5 mg/mL, was coupled to a HiTrap NHS column (GE Healthcare, Sweden).
Human IgM (Sigma Aldrich, Israel) was passed through an MDA–human serum albumin Sepharose column. Unbound IgM considered as non‐anti‐MDA (flow through, FT) was collected by washing the columns with binding buffer. After washing steps with binding buffers, bound anti‐MDA‐IgM was eluted with 0.1 mol/L glycine–HCl elution buffer. Further eluted antibodies were desalted in PD‐10 columns (GE Healthcare, UK) and concentrated by a Centriprep centrifugal filter (Millipore, Ireland). After filtration through a 0.22‐μm filter (Sarstedt, Germany), extracted antibodies were stored at −20°C.
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3

Recombinant Human PTX3 Characterization

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A recombinant form of the human PTX3 protein (with D at position 48) was made in a CHO cell line (25 (link)), and used in surface plasmon resonance (SPR) and complement activation experiments (see below). To assess the effect of the rs3816527 (p.D48A) polymorphism on the interaction with C1q in solid phase binding assays (see below), two PTX3 constructs were generated by overlapping PCR site-directed mutagenesis that contained triplets coding either for D or A at position 48. The corresponding recombinant proteins were expressed in and purified from a HEK293 cell line as previously reported (13 (link)). Molar concentration of the recombinant PTX3 from both cell lines was estimated using a Mr value of 340,000 (26 (link)). Human IgM, bovine serum albumin (BSA) and FLAG peptide were purchased from Sigma-Aldrich. Oligonucleotides were from Eurogentec and restriction and modification enzymes from New England Biolabs. Recombinant human MASP-2 was produced in S2 cells and quantified as described previously (27 (link)).
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4

In vitro Culture of P. falciparum NF54 Parasites

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P. falciparum NF54 parasites (27 (link)) were grown in vitro in O Rh+ erythrocytes at 37°C in a controlled atmosphere, using complete culture medium (RPMI 1640 supplemented with 0.5% AlbuMax II [Life Technologies BV, Nærum, Denmark]), essentially as described previously (28 (link)). The P. falciparum NF54-derived and pVBH-transfected clone G6 was generated as described elsewhere (29 (link)– (link)31 (link)). It was maintained in the same way as the parental strain P. falciparum NF54, except that blasticidin (10 mg/ml; Life Technologies) was added to shut down transcription of endogenous var genes and to erase the epigenetic memory. IEs were selected for surface expression of defined PfEMP1 proteins by immunomagnetic selection using (i) PfEMP1-specific rat antisera followed by biotinylated anti-rat antibody (Dako) and streptavidin-coupled Dynabeads (Fisher Scientific) or (ii) PAM1.4 followed by protein A-coupled Dynabeads (Fisher Scientific), essentially as described previously (32 (link)). For selection of IgM-binding IEs, we used human IgM (Sigma) coupled to M-450 epoxy beads (Life Technologies) according to the manufacturers' instructions. The genotypic identity of the parasites and the absence of Mycoplasma contamination were verified regularly as described previously (33 (link)).
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5

Calibration and control antibodies in TBRF and LD IBs

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Alkaline phosphatase-conjugated rabbit antibody to the 39/93 kDa LDB antigens (Strategic Biosciences, Stow, MA, USA) diluted in human serum was used as a calibration control in both TBRF and LD IBs and bands with lower intensity than the calibration control were considered to be negative [34 (link)]. The two proteins used as controls in both IBs were a mixture of human IgM and IgG (Sigma, St. Louis, MO, USA) for detecting the addition of alkaline phosphatase conjugated anti-human antibodies (C1), and Protein L (Sigma, St. Louis, MO, USA) for detecting the addition of human serum (C2), as previously described [34 (link)].
Immune rabbit sera for use as a marker control in TBRF IBs were prepared by immunizing individual rabbits separately with each of the recombinant antigens from the different RFB species used in TBRF IBs (Pacific Immunology, Ramona, CA, USA). The rabbit sera were then pooled and used at a dilution of 10−4 in a single control IB strip. Alkaline phosphatase-labelled goat anti-rabbit whole IgG (KPL, Gaithersburg, MD, USA) was used as the secondary antibody.
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6

Classical Pathway Modulation by ES-62

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Immulon 4 HBX plates were coated with 50 μl of human IgM (Sigma) at 1.6 μg/ml in 0.1 m carbonate buffer (pH 9.6) overnight at 4 °C. Wells were blocked with PBS containing 1% BSA (w/v) for 2 h at room temperature. Serum was diluted 1/100 in GVBSCaMg or GVBSMgEGTA, added to plates, and incubated for 30 min at 37 °C. IgM-activated C3d deposition was detected as described for C3 activation. To examine the effects on classical pathway activity, ES-62 was added at 0.1 μg/ml with or without CRP for 30 min at 37 °C prior to addition to the IgM-coated plates.
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7

Extraction and Purification of Anti-PC and Anti-MDA Antibodies

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Anti-PC and anti-MDA were extracted as previously described15 ,26 (link). Briefly, PC-BSA and MDA-HAS, 1 mg/mL was coupled to Hitrap NHS column (GE Healthcare, Sweden). Human IgM (Sigma Aldrich, Israel) was passed through Sepharose column coupled with PC-BSA and MDA–HSA. Unbound IgM considered as non-anti-MDA or non-anti-PC (mentioned as flow through, FT) was collected by washing the columns with binding buffer followed by elution with 0.1 mol/L glycine–HCl, elution buffer. The eluted antibodies were desalted in PD-10 columns (GE Healthcare, UK) and concentrated by a Centriprep centrifugal filter (Millipore, Ireland). After filtration through a 0.22-lm filter (Sarstedt, Germany), extracted antibodies were stored at −20 °C.
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8

C1q Activation Assay with rEmCRT

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As a C1q activator, human IgM (Sigma, St. Louis, MO, USA) was coated on 96-well plates at 2 µg/mL overnight at 4 °C, then blocked with 5% BSA in PBS at 37 °C for 2 h. On each well of the plates, 2 µg of C1q was added that had been pre-incubated with different amounts of rEmCRT (0, 2, 4 µg) or BSA (4 µg, as a comparison) in total volume of 100 µL for 2 h at 37 °C and incubated for 1 h at 37 °C. After washing with PBST, C1q-D diluted at 1:100 in 1 × Veronal buffer (VB, Lonza, Basel, Switzerland) containing 0.05% Tween-20 and 0.1% gelatin was added into each well for 1 h at 37 °C to finish the classical complement activation. NHS at dilution of 1:50 was used as a positive control. After being washed for three times with PBST, each well was added with 100 µL goat anti-human C4 mAb (1:1000 Abcam, Cambridge, UK) or rabbit anti-human C3 polyclonal antibodies (1:100, BOSTER Biological Technology Co., Ltd..., Chengmai, China) to determine C4 and C3 intermediate product of classical complement activation. HRP-conjugated rabbit anti-goat or goat anti-rabbit IgG (1:5000 or 1:1000, Affinity Biosciences, Liyang, China) was used as the secondary antibody and OPD (Beyotime Biotechnology, Shanghai, China) was used as the substrate.
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9

Rosetting Assay and IgM-Mediated Binding

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Rosetting assays were performed using cultures with high rosetting rates (60–95%) and frequencies were assessed by counting 200 ethidium bromide‐stained IEs and noting those that had two or more erythrocytes adhering using wet slide preparations and fluorescence microscopy. To determine the role of Fc‐mediated IgM binding in rosetting, synchronous ring stage IEs were incubated overnight (37°C, 5% CO2) with NHS (10%), IgM‐depleted NHS, IgM‐depleted NHS plus human IgM (Sigma; 4 mg ml−1), Albumax II (10%) or Albumax II (10%) plus IgM (4 mg ml−1). The following day the relative rosetting frequency of triplicate wells was assessed as described above. To examine the involvement of different HB3VAR06 domains in rosetting, synchronous HB3VAR06+ IEs were grown from the ring to the late trophozoite stages in 10% NHS in the presence of 1:20 dilutions of domain‐specific antisera followed by assessment of rosetting rates as above.
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10

Quantitative IgM and IgG3 Measurement

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IgM concentrations in supernatants from all cell cultures were determined by ELISA. A calibration curve using human IgM 1.6–100 ng/mL (Sigma-Aldrich, St. Louis, MO, USA) was used to quantify results. All experiments were performed in duplo (medians were used for end result). Supernatants were diluted, if necessary, to fit within the measurements of the calibration curve. Measurements <1.6 ng/mL were considered negative. IgG3 concentrations were measured in the same way using an ELISA-kit with a calibration curve of 4.4–200 ng/mL (Affymetrix/eBioscience, Santa Clara, CA, USA).
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