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Anti pgk1

Manufactured by Santa Cruz Biotechnology
Sourced in China

Anti-PGK1 is a primary antibody that recognizes the phosphoglycerate kinase 1 (PGK1) protein. PGK1 is an essential enzyme involved in the glycolytic pathway, catalyzing the conversion of 1,3-bisphosphoglycerate to 3-phosphoglycerate. The Anti-PGK1 antibody can be used to detect and quantify the expression of PGK1 in various biological samples.

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7 protocols using anti pgk1

1

Antibody Detection for Protein Analysis

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Antibodies were commercially purchased including mouse monoclonal antibody anti-PGK1 (Santa Cruz Biotechnology, Cat. sc-130335; RRID: AB_627677), mouse monoclonal antibody anti-phosphate-tyrosine (anti-pY; Santa Cruz Biotechnology, Cat. sc-7020; RRID: AB_628123), rabbit polyclonal antibodies anti-acetylated lysine (anti-Ac; Cell Signaling Technology, Cat. 9441), rabbit monoclonal antibody anti-β-actin (ABclonal, Cat. AC026), mouse anti-GFP-Tag mAb (ABclonal, Cat. AE012), mouse anti-His-Tag mAb (ABclonal, Cat. AE003), mouse control IgG (ABclonal, Cat. AC011), and alkaline phosphatase-labeled goat anti-rabbit or horse anti-mouse IgG secondary antibodies (ZSGB-BIO, Cat. ZB-2308; ZB-2310). ATG8 and Caspase3 were detected with rabbit polyclonal antibodies against H. armigera ATG8 and Caspase3 that were prepared in our laboratory.
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2

Glycolytic Enzyme Expression Analysis

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RAW246.7 cells (BP group and NC group) were lysed in SDS lysis buffer (1% SDS, 50 mM Tris–HCl, pH 7.5, 100 mM NaCl, and complete protease inhibitors (Roche)), measured the protein concentration with BCA kit, resolved 40 μg protein on a 4–12% SDS-PAGE gel, transferred it to a nitrocellulose membrane, and immunoblotted it with the indicated antibodies. The lanes containing the target sample are cropped and incubated with corresponding antibodies. We obtained the antibodies used in this study from the following sources: anti-PGM1 (2 μg/ml, Santa Cruz, sc-373796), anti-PGK1 (2 μg/ml, Santa Cruz, sc-130335), anti-PKM (2 μg/ml, Santa Cruz, sc-365684), anti-O-GlcNAc antibody (2 μg/ml, RL2, clone18B10.C7, Thermo Scientific), and anti-Actin (2 μg/ml, Beyotime, AA128).
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3

Pgm2p-GFP Fusion Protein Analysis

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Western blot analysis was used to investigate the protein content for Pgm2p-GFP fusion protein. Deleted mutant strains with GFP-tagged PGM2 were grown in media treated with and without LiCl to investigate protein levels of PGM2. Protein extraction was performed as described by Szymanski et al. [75 (link)]. Bicinchoninic acid assay (BCA) was performed to estimate protein concentration as described by the manufacturer (Thermo Fisher®, Ottawa, ON, Canada). Equal amounts of total protein extract (50 μg) were loaded onto a 10% SDS-PAGE gel, run on Mini-PROTEAN Tetra cell electrophoresis apparatus system (Bio-Rad®). Proteins were transferred to a nitrocellulose 0.45 μm membrane via a Trans-Blot Semi-Dry Transfer (Bio-Rad®). Mouse monoclonal anti-GFP antibody and anti-Pgk1 (Santa Cruz®) were used to detect protein levels of Pgm2p-GFP and Pgk1p, respectively. Immunoblots were visualized with chemiluminescent substrates (Bio-Rad®) on a Vilber Lourmat gel doc Fusion FX5-XT (Vilber®). Densitometry analysis was carried out using the FUSION FX software (Vilber®, Collégien, France). Experiments were repeated at least three times. T-test analysis (p-value ≤ 0.05) was used to determine statistically significant results.
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4

Metabolic Modulation of Seneca Valley Virus

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Porcine kidney-15 (PK-15) and human embryonic kidney (HEK293T) cells were cultured at 37°C and 5% CO2 in Dulbecco’s modified Eagle’s medium (DMEM; Gibco) supplemented with 10% fetal bovine serum (FBS; Gibco), 100 IU/mL penicillin, 100 g/mL streptomycin, and 2 mM L-glutamine (Gibco). The SVA strain, CH-GDFS-2018, was isolated by our group and propagated and titrated in PK-15 cells using the Reed–Muench method [46 (link)]. The SVA strain was incubated in a water bath at 70°C for 2 h to generate a heat-inactivated SVA (Heat-SVA).
Sodium oxamate, 2-deoxyglucose (2DG), sodium lactate, dichloroacetate (DCA), and glucose were purchased from Macklin (Shanghai, China). The 2DG (50 mM), sodium oxamate (25 mM), DCA (5 mM), sodium lactate, and glucose were directly solubilized in DMEM or phosphate buffered saline (PBS) at the indicated concentrations. DMEM, PBS, and FBS were obtained from Gibco (Grand Island, NY, USA). Anti-HIF-1α, Anti-PGK1, anti-PKM, anti-GAPDH, anti-RIG-I and anti-β-actin primary antibodies were purchased from Santa Cruz (Shanghai, China). A primary antibody of rabbit anti-VP2 of SVA was prepared and stored in our laboratory [27 (link)]. The respective horseradish peroxidase (HRP)-conjugated secondary antibodies were obtained from Abcam (Cambridge, UK).
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5

Optimized Yeast Protein Extraction and SDS-PAGE

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The standard trichloroacetic acid (TCA) precipitation-based method was used to extract protein from yeast. Precipitates were resuspended in HU buffer (8 M urea; 5% SDS; 1mM EDTA; 1,5% DTT; 1% bromophenol blue; 200mM Tris-HCl pH 6,8) and incubated at 70°C for 15 min prior to loading on SDS-PAGE gels. To separate proteins by SDS-PAGE, the 4-12% gradient Bis-Tris NuPAGE gels (Invitrogen) run in MES buffer were used. Gels were transferred to a nitrocellulose membrane using the iBlot2 system (ThermoFisher). Primary antibodies were probed overnight followed by several washing steps and incubation with fluorescent secondary antibodies. Signal was measured using the Li-COR (Odyssey) system. Antibodies used in this study: Anti-APOE (mouse monoclonal E8, Santa Cruz), anti-PGK1 (rabbit polyclonal, ABIN568371), anti-mouse secondary 800CW dye conjugate (LI-COR, 926-32212), anti-rabbit secondary 680CW dye conjugate (LI-COR, 926-68073).
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6

Quantitative Western Blotting Analysis

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The cells were washed twice with PBS,
collected by scraping in radioimmunoprecipitation assay buffer with
EDTA-free complete protease inhibitors (Roche), and sonicated on ice
for 15 s (1 s on/off cycles). Insoluble debris was cleared by centrifugation
at 16,000g and 4 °C for 15 min. The supernatant
was diluted into 4× Laemmli buffer containing 100 mM βME,
heated to 95 °C for 5 min, cooled to room temperature, resolved
on a 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis
gel, and transferred onto a nitrocellulose membrane by standard Western
blotting methods. The membranes were blocked in 2% BSA in TBS + 0.1%
Tween-20 (TBST). The antibodies used in this study include: anti-MRP1
(1:1000, #72202, Cell Signaling Technology) and anti-PGK1 (1:3000,
sc-130335, Santa Cruz Biotechnology). Secondary donkey antirabbit
680 and donkey antimouse 800 (1:10,000, LiCor). The blots were imaged
on a LiCor infrared scanner and images processed in ImageJ.
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7

Western Blot Optimization for Protein Detection

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Western blotting was conducted as described previously14 (link)17 (link)23 (link) with some modifications. Briefly, transiently transfected MONOMAC-6 cells were collected and lysed with RIPA buffer (Thermo Scientific, BufferRockford, IL). Proteins from the lysate were fractionated by electrophoresis through 4–15% polyacrylamide gels (Bio-rad, Hercules, CA) and transferred to polyvinylidene fluoride membranes using tris-glycine transfer buffer (Thermo Scientific). Blots were incubated with IRDye 800CW-conjugated or 700CW-conjugated antibody and infrared fluorescence images were obtained with the Odyssey infrared imaging system (Li-Cor Bioscience, Lincoln, NE). 100-200 ng ml−1 anti-CRTC1, anti-FLT3, anti-MYCBP, anti-BMI1, anti-CDK6, anti-PGK1 (Santa Cruz Biotechnology Inc.), anti-HMGA1 (Abcam) and anti-GAPDH (Thermo Scientific) antibodies were used to detect corresponding proteins. Original scans can be found as Supplementary Figures 7–9.
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