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6 protocols using ab109245

1

Western Blot Analysis Protocol

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Cell lysates were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrophoretically transferred to nitrocellulose membranes (Amersham). Membranes were blocked overnight in 5% w/v BSA and incubated with primary antibody for 2 h. Anti-GST-HRP (RPN1236, 1:10000) was from Sigma-Aldrich. Anti-phosphotyrosine antibody (4G10) was obtained from Millipore. Anti-Elongin C antibody (610761, 1:3000) was from BD Biosciences. Anti-p44/42 (9102S, 1:2000), anti-STAT5 (94205; 1:3000), and anti-phospho-STAT5 (9359; 1:2000) were purchased from Cell Signaling. Anti-actin-HRP antibody (C4) was obtained from Santa Cruz (sc-47778 HRP; 1:1000). Anti-Cullin 5 (ab184177), anti-Elongin B antibody (ab154854, 1:2000), and anti-SOCS2 antibody (ab109245, 1:1000) were purchased from Abcam. Antibody binding was visualized with peroxidase-conjugated sheep antirabbit immunoglobulin (Southern Biotech; 4010-05; 1:15000), or sheep antimouse immunoglobulin (GE Healthcare; NA931-1ML; 1:10000) and the enhanced chemiluminescence (ECL) system (Amersham or Millipore).
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2

Immunohistochemical Analysis of CRC

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This study was approved by the Institutional Review Board of Zhabei Central Hospital of Jing'an District. Paraffin-embedded CRC specimens from patients treated at Zhabei Central Hospital of Jing'an District were enrolled in this study with their written consent. None of these patients had received radiotherapy or chemotherapy prior to surgery.
CRC specimen sections were deparaffinized and dehydrated using sequential diluted xylene and ethanol wash. The antigen was retrieved by treating slides in 0.01 M sodium citrate buffer (pH 6) for 15–20 min. The slides were then permeabilized in 3% hydrogen peroxide and blocked using 5% bovine serum albumin. Primary antibody anti-TRIM6 (ProteinTech, 11953-1-AP), anti-SOCS2 (Abcam, ab109245), or anti-p-STAT3 (Abcam, ab76315) was incubated overnight. The corresponding HRP secondary antibodies (Long Island Bio, Shanghai, China) were then used. The signal was developed using the DAB staining kit (Long Island Bio) along with hematoxylin staining. The intensity grading was calculated as follows: IRS = staining intensity (SI) × percentage of positive cells. The SI was ranked from 1 to 3 (negative to strong). Overexpression was defined as having a staining index >3. Staining was independently assessed by two investigators.
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3

Western Blot Analysis of Epigenetic Regulators

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Total proteins were extracted by RIPA buffer, and BCA protein assay kit was used to determine the corresponding concentration. Protein (25 μg) was isolated by 8% SDS–PAGE and subsequently transferred to PVDF membranes. The 1% BSA in TBS buffer was used to block the membranes, and primary antibodies were cultivated at 4°C overnight. The membrane was then washed with 1× TBST and cultivated with a secondary antibody horseradish-peroxidase-conjugated in 1×TBS at room temperature for 1 h. The membrane was washed with 1× TBST, and the protein expression was determined using SuperSignal West Pico Chemiluminescent Substrate (Pierce Biotechnology). The loading control was β-actin, detected on the same blot. All primary antibodies were purchased from Abcam: DNMT3A (ab188470; 1:2,000), DNMT3B (ab2851; 1:2,000), SOCS2 (ab109245; 1:5,000), STAT5 (ab126832; 1:1,000), P-STAT5 (ab32364; 1:1,000), and the secondary antibody (ab6802, 1:2,000).
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4

Western Blot Analysis of SOCS2, Caspase-3, Bax, and Bcl-2

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The total protein was extracted from cells using RIPA lysis buffer. Proteins were separated on 10% SDS-polyacrylamide gel electrophoresis and were subsequently transferred onto polyvinylidene fluoride membranes. After the membranes were blocked with 5% milk for 1 h at room temperature, the membranes were incubated into primary antibodies for SOCS2 (#ab109245, abcam), cleaved caspase-3 (#ab2302, abcam), Bax (#ab182733, abcam) and Bcl-2 (#ab182858, abcam). A horseradish peroxidase-conjugated goat anti-rabbit IgG (#ab205718, abcam) was used as a secondary antibody. Blots were detected using an enhanced chemiluminescence kit (Beyotime), and Image J was used to analyze the gray value.
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5

Western Blot Analysis of Signaling Proteins

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Equal amounts of protein were subjected to SDS-PAGE and transferred to PVDF membranes (Millipore, Bedford, MA, USA). The membranes were incubated with primary antibodies, including rabbit anti-ILF3 (1:2000, ab93255, Abcam), rabbit anti-SFPQ (1:2000, ab133574, Abcam), rabbit anti-NONO (1:2000, ab177149, Abcam), rabbit anti-GAPDH (1:5000, 5174, Cell Signaling Technology), rabbit anti-H3 (1:5000, 9728, Cell Signaling Technology), rabbit anti-SOCS2 (1:2000, ab109245, Abcam), rabbit anti-pJAK2 (1:2000, ab32101, Abcam), rabbit anti-JAK2 (1:2000, ab108596, Abcam), rabbit anti-pSTAT5 (1:2000, ab32364, Abcam), rabbit anti-STAT5 (1:2000, ab200341, Abcam), rabbit anti-pSTAT3 (1:2000, ab76315, Abcam), rabbit anti-STAT3 (1:2000, ab68153, Abcam). HRP-linked secondary antibody was used as the secondary antibody. Signals were visualized with chemiluminescence (Millipore, MA, USA).
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6

Western Blot Analysis of SOCS2 Protein

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Total protein was isolated using RIPA lysis buffer (Beyotime Institute of Biotechnology) containing protease inhibitor phenylmethanesulfonyl fluoride (Beyotime). The protein was quantitated with the BCA protein assay kit (Pierce, Rockford, IL). Then, 20 μg protein was resolved by SDS-PAGE and followed by being transferred to polyvinylidene difluoride (PVDF) membranes (Bio-Rad). The membrane was incubated with primary antibody against SOCS2 (1:1000, ab109245; Abcam) and β-actin (1:1000, ab8226; Abcam) at 4°C after blocking with 5% milk for 1 h at room temperature. Then anti-rabbit secondary antibody was used at a concentration of 1:5000 to incubate the membranes for 2 h. Finally, the protein bands were visualized using an ECL kit (Applygen, Beijing, China) and the protein levels were evaluated using ImageJ software by normalized to β-actin.
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