The largest database of trusted experimental protocols

4 protocols using pcaggs nicd

1

Notch Signaling Pathway Expression Vectors

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following expression vectors were used in the present study: p4xCSL-firefly luciferase (Addgene #41726), pCAGGS-NICD (Addgene #26891), DN-dynamin 1 (Dynamin 1 K44A, a gift from Dr. Sandra Schmid), DN-dynamin 2 (GFP-dynamin 2 K44A, Addgene #22301), HA-Ubiquitin (Addgene #18712), pHR_SFFV_LaG17_synNotch_TetRVP64 (Addgene #79128), pHR_EGFPligand (Addgene #79129), pCS2-Notch1 FL-6MT (Addgene #41728), pCMV-mouse Dll1 (OriGene), pCMV-mouse Dll4 (OriGene), p6872 pHAGE-N-V5-MAML1-FL (Addgene #37048), and pHes1-GFPd2 (Addgene #14808). pCS2-Notch1 L468A was constructed by site-directed mutagenesis using the PrimeSTAR Mutagenesis Basal Kit (Takara). DN-MAML1 lacking the NICD-binding domain (13L-74H) and Dll1ΔC and Dll4ΔC lacking the intracellular domain (Dll1:569V-728L, Dll4:552A-686V) were amplified by polymerase chain reaction (PCR) and subcloned into pCAG-RB using the In-Fusion HD Cloning Kit (Clontech). pCMV-HA-Notch1 and pCMV-Myc-Ubiquitin were constructed by subcloning the cDNAs of Notch1 or Ubiquitin into pCMV-HA-N or pCMV-Myc-N (Clontech), respectively. Mouse and chick Psd1 cDNAs (ENSMUSG00000023452 and ENSGALT00000011126.6, respectively) were chemically synthesized and subcloned into the pGL3-promoter or pCMV-Myc-N vector.
+ Open protocol
+ Expand
2

Gaussia Luciferase Reporter Construct

Check if the same lab product or an alternative is used in the 5 most similar protocols
To create the pGLuc-4XCSL reporter construct, the 4XCSL sites were subcloned from the pGL2-4XCSL-luciferase vector (a gift from Raphael Kopan; Addgene plasmid #41726) [32 (link)], into pGLuc-basic (New England Biolabs) using EcoRI and HindIII. The pCAGGS-NICD expression vector was a gift from Nicholas Gaiano (Addgene plasmid #26891) [33 (link)]. SW480 and HCT116 cells were seeded in technical triplicate into 6-well dishes at a density of 4 × 105 cells/well. Approximately 12–16 h post-seeding, cells were co-transfected with 1.0 μg pGLuc-4XCSL, 0.5 μg pRS-β-galactosidase, 0.175 μg pCAGGS-NICD, and the indicated amount of pcDNA3-hKaiso using TurboFect™ Transfection Reagent (Thermo Fisher cat. #R0532). Twenty-four hours post-transfection, culture media was assayed for luciferase using the Biolux™ Gaussia Luciferase Assay Kit (New England Biolabs; cat. #E3300L), and read on an LB luminometer (Thermo Fisher). Luciferase activity was normalized to β-galactosidase to control for transfection efficiency. The average luciferase values from 3 biological replicates were calculated and plotted as relative fold change against the empty pGLuc-basic vector. Statistical significance was calculated using one-way analysis of variance (ANOVA).
+ Open protocol
+ Expand
3

Notch-1 Knockdown and Overexpression

Check if the same lab product or an alternative is used in the 5 most similar protocols
For knockdown studies, cells were transfected with Notch-1 siRNA and siRNA control (Santa Cruz Biotechnology, Santa Cruz, CA) using siRNA Transfection Reagent (Santa Cruz Biotechnology) as recommended by the manufacturer and previously described (20 (link)). For overexpression studies, cells were transfected with NICD expression vector (p-CAGGS-NICD) (Addgene, Cambridge, MA) or empty vector using FuGene HD Transfection Reagent (Promega, Madison, WI) as recommended by the manufacturer.
+ Open protocol
+ Expand
4

In Utero Electroporation of Mouse Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
IUE was performed according to a previous publication.28 Plasmids of pCAGEN‐SBP‐DICER1 (#50558), pCAGGS‐NICD (#26891) and pCAG‐GFP (#11150) were purchased from addgene. Mouse Jag1 was amplified and cloned into HindIII/BamHI sites of p3xFLAG‐CMT‐14 vector. Pregnant mice at E13.5 were anaesthetized with isoflurane (3% for induction and 2% during surgery for maintenance). A 1.5 cm incision was made along the linea alba in the lower abdomen, and the uterine horns were exposed. Desired plasmids (1.5 mg/mL) diluted in 1ul sterile Tris‐EDTA buffer (pH 7.4), which contained Fast Green (Sigma), were injected into the lateral ventricle of embryos at E13.5. Five 50 ms pulses of 33 V with 950 ms intervals were applied with a BTX electroporation system (ECM830). After electroporation, the uterine horns were placed back and the incision was sutured. The embryonic brains were used for further experiments at E15.5.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!