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11 protocols using dimethyl sulfoxide (dmso)

1

Detailed Inorganic Reagent Preparation

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TBAN and HEPES were purchased from Sigma-Aldrich
in puriss quality. HCl, KOH, KCl, DMSO, DMF, and KH-phthalate were
obtained from Molar Chemicals (Hungary) and used without further purification.
The stock solutions of metal ions were prepared by the dissolution
of CuCl2, FeCl3, and ZnCl2 in water,
and the concentration was determined by complexometry using ethylenediaminetetraacetic
acid (EDTA). The Fe(II) stock solution was generated through the interaction
of iron powder and HCl in a purified, strictly oxygen-free argon atmosphere.
Subsequently, the solution was filtered and stored for use under anaerobic
conditions in a laboratory glovebox (GP(Campus), Jacomex), ensuring
that the O2 level was kept below 1 ppm. The concentration
of the Fe(II) solution was determined through titrations with KMnO4. All solutions were prepared using Milli-Q. If required,
the pH was adjusted to the desired level by adding of HCl or KOH.
All solvents used for the syntheses were dried and purified according
to standard procedures.
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2

Cytotoxicity Evaluation of Metal Complexes

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The effect of the complexes and of their ligands alone on the viability (on the metabolic activity) of human cancer cells was assessed by MTT assay. The tested compounds were dissolved in 90% (v/v) DMSO/H2O at 10 mM concentration. Equimolar solutions of the ligand CuCl2 salt were used for the cytotoxicity assays. The metal salts without ligands were also tested. For this, 1 × 104 cells/well were seeded into 96-well plates and left to grow overnight. On the following day, cells were exposed to increasing concentrations of each compound (0; 2.5; 5; 10; 15; 20 µM). After a 24 h incubation, cells were washed with PBS buffer and then incubated with 0.5 mg/mL MTT (Sigma-Aldrich, St Louis, Missouri, MO, USA) for 1 h at 37 °C. The formazan crystals were solubilized in DMSO (Molar Chemicals, Halásztelek, Hungary), and the absorbance of samples was determined at 570 nm using a Synergy HTX plate reader (BioTek, Winooski, Vermont, VT, USA). Absorption corresponding to the untreated control samples was considered as 100%. The viability measurements were repeated three times using 3 independent biological replicates.
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3

Quantification of E. coli Violacein Production

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To quantify the violacein production of liquid E. coli cultures, we applied the modified protocol of Zhu et al. [47 (link)]. The investigated strain was grown in LB with or without selection for 24 h at 37 °C. One milliliter of the culture was spun at 13,000 rpm for 10 min. After discarding the culture supernatant, 1 mL of DMSO (Molar Chemicals Kft., Halásztelek, Hungary) was added to the pellet. The solution was vigorously vortexed for 30 s to completely solubilize violacein and was centrifuged again at 13,000 rpm for 10 min to remove the cell debris. Then, 200 μL aliquots of the violacein-containing supernatant were transferred to a 96-well flat-bottomed microplate (Greiner Bio-One International, Kremsmünster, Austria), making three technical replicates, and the absorbance was recorded at 585 nm using a Synergy2 microplate reader (BioTek, Winooski, VT, USA).
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4

Evaluating Cytotoxicity of MSN Treatments on Breast Cancer Cells

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To investigate the viability of MCF-7 and MCF-7 KCR cells upon treatments with the different MSNs, 104 cells/well were seeded into 96-well plates and were exposed to RhoB@MSNs, or to RhoB@Rho123@MSNs in various concentrations (0; 0.2; 0.4; 0.6; 0.8; 1; 1.2; 1.4 mM of MSNs). After 24-hour treatments, we removed the MSN-containing media, washed the cells, and incubated them with 0.5 mg/mL MTT (Sigma-Aldrich, Saint Louis, MO, USA) in culture medium for 1 hour at 37°C. Formazan crystals were solubilized in DMSO (Molar Chemicals, Halásztelek, Hungary), and the absorbance at 570 nm (Background: 630 nm) was determined using Synergy HTX plate reader (BioTek, Winooski, Vermont, USA). Statistical analysis was performed in GraphPad Prism 6 software using two-way ANOVA Sidak’s multiple comparisons test.
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5

Formulation Development of Meloxicam-HSA Complexes

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Meloxicam (MEL, 4-hydroxy-2-methyl-N-(5-methyl-2-thiazolyl)-2H-benzothiazine-3-carboxamide-1,1-dioxide) was donated by EGIS Pharmaceuticals Plc. (Budapest, Hungary) for research work. Human serum albumin (HSA, lyophilized powder, purity > 97%), fluorescein isothiocyanate-labelled HSA (FITC-HSA), Tween 80 (Tween), P407, disodium hydrogen phosphate (Na2HPO4), sodium dihydrogen phosphate (NaH2PO4), polar brain lipid extract, cholesterol, mucin from porcine stomach (Type III), and all reagents for cell line studies were purchased from Sigma Aldrich Co. Ltd. (Budapest, Hungary) if not indicated otherwise. Analytical grade solvents such as methanol, dimethyl sulfoxide (DMSO) and dodecane were purchased from Molar Chemicals (Budapest, Hungary). Sodium hyaluronate (NaHA, Mw = 1400 kDa) was obtained from Gedeon Richter Plc. (Budapest, Hungary). In all experiments, water was purified by the Millipore Milli-Q® 140 Gradient Water Purification System.
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6

Curcumin Solubilization Using Block Copolymers and Cyclodextrins

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Curcumin (Mw = 368.38 g/mol; purity ≥ 65% by HPLC), the poly(ethylene glycol)-block-poly(propylene glycol)-block-poly(ethylene glycol) block copolymers, Pluronic F108 and F127 were purchased from Sigma-Aldrich (St. Louis, Missouri, USA), P94 and P105 were a kind gift of BASF Hungary(Budapest, Hungary). Main properties of the Pluronics, structure, critical micellar concentration (cmc), hydrophilic/lipophilic balance (HLB) are summarized in Table 1. The 2-hydroxypropyl-α-cyclodextrin (HP-α-CD), 2-hydroxypropyl-β-cyclodextrin (HP-β-CD), 2-hydroxypropyl-γ-cyclodextrin (HP-γ-CD) and the soluble α/β/γ-cyclodextrin polymer crosslinked with epichlorohydrin (poly-α-CD/poly-β-CD/poly-γ-CD) were received from Cyclolab Ltd. (Budapest, Hungary), used as received. Their main properties are shown in Table 2. Methanol, ethanol, dimethyl-sulfoxide (DMSO) and acetone were of laboratory grade from Molar Chemicals Kft. (Budapest, Hungary) while sodium chloride, sodium hydroxide, potassium dihydrogen phosphate, disodium hydrogen phosphate and sodium dodecylsulfate (SDS) from Sigma-Aldrich (St. Louis, MO, USA) were of analytical (ACS) grade.
The chemical compositions of the Curcumin (Figure 1a), block-copolymers (Figure 1b) and cyclodextrin derivatives (Figure 1c–e) are shown below.
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7

Evaluating TiO2 NPs and PAA Cytotoxicity

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To estimate the effect of TiO2 NPs and PAA alone on the viability of A549 cells, 104 cells/well were seeded into 96-well plates and exposed to either TiO2 NPs or PAA for 24, 48, and 72 hours. The suspension of TiO2 NPs was added to the culture medium to achieve concentrations of 0.025–2 mg/mL, while for cells in separate wells corresponding amounts of PAA were added. After the treatments, the NP- or PAA-containing culture medium was removed and cells incubated with 0.5 mg/mL yellow MTT reagent (Serva, Heidelberg, Germany) diluted in culture medium for 1 hour at 37°C. The formazan crystals generated were solubilized in dimethyl sulfoxide (Molar Chemicals, Halásztelek, Hungary) and absorbance at 570 nm determined using a Synergy HTX plate reader (BioTek, Winooski, VT, USA). MTT measurements were repeated three times using at least four independent biological replicates.
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8

PLGA Copolymer-based Drug Delivery

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The poly(lactide-co-glycolide) copolymers with different lactide to glycolide ratio (PLGA50: 50/50, Mw = 30,000–50,000 Da; PLGA65: 65/35, Mw = 40,000–75,000 Da; PLGA75: 75/25, Mw = 66,000–107,000 Da) were purchased from Sigma-Aldrich (Budapest, Hungary). Sodium phosphate dibasic dodecahydrate (Na2HPO4 × 12H2O; ≥99%), sodium phosphate monobasic dihydrate (NaH2PO4 × 2H2O; ≥99%), sodium chloride (NaCl; ≥99%), acetone (C3H6O; ≥99%) and dimethyl-sulfoxide (DMSO; C2H6OS; ≥99%) were obtained from Molar Chemicals (Budapest, Hungary). The ketoprofen (KP, C16H14O3, ≥98%), Pluronic F127 (PLUR, (C3H6O·C2H4O)x, Mw = ~12,600 Da) and Tween20 (TWEEN, C58H114O26, Mw = 1228 Da) were obtained from Sigma-Aldrich. Highly purified water was obtained with a Millipore Direct-Q 3 UV purification apparatus (18.2 MΩ·cm at 25 °C). The components and solvents were analytical grade and further purifications were not used.
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9

Quantitative GC-FID Analysis of Ethanol

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The analyses were carried out with an Agilent 6890N GC-FID (Santa Clara, CA, USA) system equipped with a TR-WAX (Thermo Fisher Scientific, Waltham, MA, USA) capillary column (30 m × 250 µm × 1.0 µm). The GC oven temperature was programmed to increase from 60 (5 min isothermal) to 240 °C at 30 °C/min (5 min isothermal). High-purity hydrogen (5.0) was used as a carrier gas at 2.9 mL/min (29 cm/s) in constant pressure mode. Vials were crimped in order to minimize the loss of volatile species. Absolute ethanol (a.r., Molar Chemicals Kft., Halásztelek, Hungary) was used as a standard to identify the ethanol peak based on retention time. For FID quantification, external standard technique was used. Then, 100 mg Absolute ethanol was diluted with dimethyl sulfoxide (a.r., Molar Chemicals Kft., Halásztelek, Hungary) to achieve a final concentration of 10 mg/mL as a stock solution. The calibration curve covered the range 0.5 to 2.0 mg/mL.
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10

Synthesis of Photosensitive Cyclodextrin Derivatives

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6-Monodeoxy-6-monoazido-bCD and 6-monotosyl-bCD are fine chemical products of CycloLab, 1,3-diaminopropanol (!99%), 4-nitro-3-(trifluoromethyl)aniline (98%), glycidyltrimethylammonium chloride (technical grade, !90%), sodium azide (ReagentPlus 1 , !99.5%), hydrazine monohydrate (reagent grade, 98%), sodium borohydride (!98.0%), anthracene-9-carboxaldehyde (!97.0%), p-toluenesulfonyl chloride (ReagentPlus 1 , !99%), trimethylamine (!99%), 1,3-propanedithiol (!99%), palladium on carbon (5%), were sourced from Sigma-Aldrich.
Dimethyl sulfoxide, formic acid, methanol, pyridine were obtained from Molar Chemicals.
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