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Real time pcr kit

Manufactured by Toyobo
Sourced in Japan

The Real-time PCR kit is a laboratory equipment designed for the amplification and detection of specific DNA sequences in real-time. It is a versatile tool used for various applications, including gene expression analysis, pathogen detection, and quantitative analysis.

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7 protocols using real time pcr kit

1

Soybean Gene Expression Analysis

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Total RNA was isolated from leaves or hairy roots of soybean using Trizol reagent (Invitrogen, Shanghai, China), and RT-qPCR analysis was performed on a LightCycler96 instrument (Roche, Switzerland) with a real-time PCR kit (TOYOBO, Osaka, Japan). The gene expression levels were calculated by the 2−ΔΔCt method with GmEF1β (GenBank accession no. NM_001248778) and GmTUB4 (GenBank accession no. EV263740) as the internal control. The reaction conditions consisted of an initial 5 min pre-incubation at 94 °C, and 40 cycles at 94 °C for 30 s, 59 °C for 30 s, and 72 °C for 40 s, followed by a melting-curve analysis from 55 °C to 100 °C with a final cooling for 10 min at 72 °C. The relative transcript abundance of each target gene was calculated using the 2−∆∆CT method. The primers used for expression analysis are shown in Table S2.
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2

Quantifying GmPIB1 Transcripts in Soybean

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Total RNA was isolated from ‘Williams’ and ‘L77-1863’ soybean leaves using Trizol reagent (Invitrogen, Shanghai, China). cDNA synthesis was conducted using an M-MLV reverse transcriptase kit (Takara, Dalian, China) according to the manufacturer’s instructions. RT-PCR was performed to analyse GmPIB1 transcript levels in ‘Williams’ and ‘L77-1863’ plants according to Zhang et al. (2012) (link). The soybean housekeeping gene GmEF1β (GenBank accession no. NM_001248778) was used as the internal control. qRT-PCR analysis was performed to measure GmPIB1 transcript levels on a CFX96 Touch™ Real-Time PCR machine (Bio-Rad, USA) using a real-time PCR kit (Toyobo, Japan). The soybean housekeeping gene GmEF1β was used as an internal reference to normalize all data. The relative transcript level of the target gene was calculated using the 2−ΔΔCT method. Three biological replications per line were performed in each test.
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3

Quantitative Analysis of GmIFR Expression

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Quantitative real-time PCR analysis was performed to determine the transcript abundance of GmIFR. Total RNA was isolated from “Suinong 10” soybean leaves using Trlzol reagent (Invitrogen, Shanghai, China). The synthesis of cDNA was conducted using an oligo(dT) primer and a M-MLV reverse transcriptase kit (Takara, Dalian, China) according to the manufacturer's instructions. qRT-PCR was performed on a CFX96 Touch™ Real-Time PCR machine (Biobad, USA) using the real-time PCR kit (ToYoBo, Japan). DNA accumulation was measured using SYBR Green as the reference dye. The soybean housekeeping gene Gmactin4 (GenBank accession no. AF049106) was used as the internal control (see Supplementary Table S1 for primer sequences). For tissue distribution analysis, the transcript level of GmEF1 gene (GenBank accession no. NM_001248778) was used as quantitative control (see Supplementary Table S1 for primer sequence). The relative expression of target gene in different tissues of soybean was calculated using the 2−ΔΔCT method. For each sample, three biological replicates were analyzed with their respective technical replicates.
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4

Quantitative Analysis of GmWAK1 in Soybean

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We performed quantitative real-time PCR (qRT-PCR) to analyze the GmWAK1 transcript levels using a real-time PCR kit (Toyobo, Japan; part number FSQ-201) [83 (link)]. As a housekeeping gene, we used GmEF1β (GenBank accession no. NM_001248778) in soybean as an internal reference to normalize all data. We calculated relative transcript levels using the 2−ΔΔCT method. We performed three biological replicates per experiment per line.
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5

Quantitative Gene Expression Analysis

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Trizol reagent (Invitrogen Inc., Carlsbad, CA, USA) was used to isolate total RNA from the hypothalamus. RNA quality was assessed by measuring the 260/280 ratio. The first strand cDNA synthesis kit (Toyobo, Osaka, Japan) was used for the production of cDNA. The target genes and HPRT loading control gene primers are shown in Table 1. Real-time quantitative polymerase chain reaction (qPCR) was performed with a real-time PCR kit (Toyobo) in a Roche LightCycle instrument (Shanghai, China). Data were analysed by the 2−ΔΔCT method.
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6

Quantifying GmSnRK1.1 Transcripts in Soybeans

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A qRT-PCR analysis was performed to confirm the transcript levels of GmSnRK1.1 using a LightCycler96 instrument (Roche, Switzerland) with a real-time PCR kit (TOYOBO, Japan). GmEF1β (GenBank accession no. NM_001248778) was used as the internal control (see Supplementary Table S1 for primers). The relative transcript abundance of the target gene was calculated using the 2–ΔΔCT method. Three biological replications were performed for each line in each analysis.
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7

Quantitative RT-PCR Analysis of Soybean Transcripts

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Total RNA was isolated using Trizol reagent and reverse-transcribed based on the manufacturer’s instructions (Invitrogen, China). cDNA was synthesized from 1 μg of total RNA using a Super Script first-strand cDNA synthesis system (Takara, Dalian, China). qRT-PCR was performed on a LightCycler96 instrument (Roche, Switzerland) using a real-time PCR kit (ToYoBo, Japan). The soybean GmEF1β housekeeping gene (GenBank accession no. NM_001248778) was used as an internal control to normalize all data (Supplementary Table S1). The relative transcript level of target genes was calculated using the 2ΔΔCT method. Three biological repeats for each line were performed in each experiment.
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