The largest database of trusted experimental protocols

35 protocols using anti ve cadherin

1

Protein Expression Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
After the cells were treated, they were lysed with RIPA (AntGene, ANT060) lysis buffer to extract the total protein in the cells. Then, the protein concentration was determined by the BCA protein detection kit, and a 10% SDS-PAGE gel was prepared for electrophoresis. After electrophoresis was completed, the proteins were transferred to a polyvinylidene fluoride membrane. A 5% skimmed milk solution was prepared and it was sealed with milk for 2 hours after the transfer was completed. Anti-LOX-1 (Abcam, ab203246), anti-MCP-1(NOVUS, NBP2-22115), anti-VCAM-1(GeneTex, GTX110684), anti-ZO-1(Cell Signalling Technology,13663S), anti-VE-cadherin (Cell Signalling Technology, 2500S), and anti-GAPDH (AntGene, ANT012) antibodies were incubated overnight at 4°C. A rabbit HRP conjugate was used as the secondary antibody. The optical density of the Western blot was quantified by using Image Lab software.
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein extraction from lung tissues was conducted using radioimmunoprecipitation assay lysis buffer with PMSF. Total protein was quantified by BCA assay. Protein samples were separated on 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis gels, and transferred to polyvinylidene fluoride membranes. After 1 h of blocking with 5% dry skimmed milk at room temperature, membranes were probed with the following primary antibodies at a dilution of 1:1000: anti-prosurfactant protein B (SPB; Santa Cruz, Dalla, TX), anti-prosurfactant protein C (SPC; Abcam, Cambridge, UK), anti-FoxM1 (Proteintech, Rosemont, IL), anti-β-actin (DEWEIBIO, China), anti-β-catenin, anti-VE-cadherin, anti-BCL-2, and anti-BAX (Cell Signaling Technology, Danvers, MA) at 4 °C overnight. After washing three times with Tris-buffered saline containing Tween, membranes were incubated for 1 h using horseradish peroxidase-conjugated secondary antibodies at room temperature. The loading control was β-actin. Imaging was performed using a gel imager and evaluated using ImageJ software v1.4.0.
+ Open protocol
+ Expand
3

Cell Lysis and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell lysates were obtained by re-suspending cell pellets in RIPA buffer (50 mM Tris pH7.4, 150 mM NaCl, 1% Triton X-100) with freshly added protease inhibitor (Roche) as previously described24 (link). Nuclear lysates were prepared with the NE-PER Kit (Pierce) following manufacturer’s recommendation. Western blot analyses were performed with anti-MKL1 (Santa Cruz, sc-32909), anti-collagen type I (Rockland, 600-401-103), anti-α-SMA (Abcam, ab5694), anti-STAT3 (Cell Signaling Technology, 9132), anti-TWIST1 (Abcam, ab50887), anti-VE-Cadherin (Cell Signaling Technology, 2158), anti-PECAM1 (Proteintech, 11265-1), anti-α-tubulin (Sigma, T5168), anti-Lamin B (Santa Cruz, sc-6216), and anti-β-actin (Sigma, A2228) antibodies. All experiments were repeated three times.
+ Open protocol
+ Expand
4

Iron Oxide Nanoparticle Toxicity Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were incubated with 0, 150, 300 and 600 μg/mL Fe2O3 for 48 h at 37 °C. HUVECs were lysed in RIPA buffer and analyzed by western blot. Primary antibodies were as follows: anti-VE-cadherin (#2500S, Cell Signaling Technology, Danvers, MA), anti-CD31 (#3528, CST), anti-α-smooth muscle actin (#19245S, CST), anti-FSP (#13018, CST) and anti-GAPDH (sc-25778, Santa Cruz). Protein bands were quantified using ImageJ software. For the rescue experiment, HUVECs were co-cultured by Fe2O3 with 0.88 mg/mL mannitol or 8.8 mg/mL ascorbic acid (AA).
+ Open protocol
+ Expand
5

Erucin Synthesis and Cell Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
Erucin was produced by myrosinase-catalyzed hydrolysis of glucoerucin isolated from Eruca sativa Mill. defatted seed meals according to Citi et al. [21 (link)]. Erucin was dissolved in dimethyl sulfoxide (DMSO; Merck KGaA, Darmstadt, Germany) and this solution (10−2 M) was freshly diluted in the appropriate culture medium.
An aqueous solution of d-(+)-Glucose (45% w/w; Merck KGaA, Darmstadt, Germany) was diluted before each experiment in culture medium up to a final concentration of 25 mM. CelLytic™ MT Cell Lysis Reagent, Fluoromount Aqueous Mounting Medium, and 3 kDa FITC-Dextran were obtained from Life Technologies (Carlsbad, CA, USA). Anti-VE-Cadherin was obtained from Cell Signalling (Danvers, MA, USA) and anti-ZO-1 was obtained from Life Technologies (Carlsbad, CA, USA). Anti-SOD-1, anti-iNOS, anti-NF-KB and anti-p22phox antibodies were obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-catalase and anti-β-actin were obtained from Merck KGaA, (Darmstadt, Germany).
+ Open protocol
+ Expand
6

Endothelial Cell Signaling Pathway Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Recombinant human TNF-α was purchased from R&D Systems (Wiesbaden-Norderstedt, Germany). Anti-PAR-1 (ATAP2), anti-NQO1, anti-eNOS, and anti-VCAM-1 were from Santa Cruz Biotechnology (Santa Cruz, CA, USA), and anti-phospho-HDAC5, anti-HDAC5, anti-phospho-ERK5, anti-ERK5, anti-phospho-AKT, anti-AKT, anti-phospho-AMPK, anti-AMPK, anti-phospho-eNOS, anti-EEA1, anti-phospho-Src, anti-phospho-FAK, anti-phospho-Erk1/2, anti-Erk1/2 and anti-VE-cadherin were from Cell Signaling Technology (Danvers, MA, USA). Anti-COX-2 was from Cayman Chemical Company (Ann Arvor, MI, USA). Anti-tubulin was from Sigma–Aldrich (St. Louis, MO, USA). Phenylephrine, Acetylcholine and U46619 were purchased from Sigma–Aldrich (St. Louis, MO, USA). Pertussis toxin (PTX) was purchased from Gibco. Small interfering RNA against human PAR-1 was purchased from Santa Cruz Biotechnology (sc-36663, Santa Cruz, CA, USA). For PAR-1 silencing, HUVECs were transiently transfected with 100 pmol/L of control RNA or siRNA targeting human PAR-1 using Lipofectamine 2000 reagent (#11668-019, Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s instructions. A non-specific control siRNA from Bioneer was used as a negative control. HUVECs were harvested 48–72 hours after siRNA transfection, protein expressions were assessed by immunoblotting with antibodies and mRNA levels by quantitative real time RT-PCR (RT-qPCR).
+ Open protocol
+ Expand
7

Quantification of Endothelial Cell Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protocol was similar to that used in previous research.19 (link) Membranes were incubated with anti-VE-cadherin (1:1000, Cell Signaling Technology, 2500, Danvers, Massachusetts, USA), anti-ZO-1 (1:1000, Cell Signaling Technology, 13,663, Danvers, Massachusetts, USA), anti-VCAM-1 (1:1000, Cell Signaling Technology, 13,662, Danvers, Massachusetts, USA), anti-ICAM-1 (1:1000, Abcam, ab18981) and anti-KLF-2 (1:250, Abcam, ab17008) antibodies. We then added horseradish peroxidase (HRP)-conjugated secondary IgG antibodies and incubated the membranes for 1 h at room temperature. Immunoreactions were visualized with an enhanced chemiluminescence (ECL) system (Millipore, Billerica, MA, United States), and protein band densities were quantified with ImageJ software. GAPDH was used as the normalization control.
+ Open protocol
+ Expand
8

Quantifying HUVEC Death and Cell-Cell Junctions

Check if the same lab product or an alternative is used in the 5 most similar protocols
HUVEC were grown to confluence in ibidi µ-slide 8 well coverslips (cat# 80826). In experiments to assess cell death, a cell viability 660 stain (eBioscience, cat# 65-0864-18) was used at 1:1000 for 20 min prior to 4% paraformaldehyde fixation (Alfa Aesar, Thermo Fisher Scientific, Heysham, UK). After washing with phosphate-buffered saline (Sigma Aldrich), samples were incubated overnight with anti-VE cadherin (Cell Signaling Technology, MA, USA, cat# 2500, 1:200). The primary antibody was removed, and fluorophore-conjugated anti-rabbit (Thermo Fisher Scientific, cat# 11-4839-81, 1:300) was applied alongside 2.5 µg/ml bisbenzimide (Sigma Aldrich). Fluorescent images were acquired by confocal scanning laser microscopy (Leica SP5). Images were analysed using the free platform FIJI [23] (link), using the ‘Analyse particles’ function to count nuclei.
+ Open protocol
+ Expand
9

VE-cadherin and F-actin Immunostaining

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for immunostaining: anti-VE-cadherin XP (Cell Signaling Technologies, Danvers, MA); Rhodamin-phalloidin for direct F-actin staining (Invitrogen Corporation, San Diego, CA) and DAPI (Thermo Fisher Scientific). Alexa 488 and Alexa 555 were the secondary antibodies (Thermo Fisher Scientific, Waltham, MA). For protein analysis: anti-VE-cadherin (Cell Signaling Technologies, Danvers, MA) and anti-β-Tubulin (Cell Signaling Technologies, Danvers, MA). Secondary antibodies were from Invitrogen, Paisly, UK.
+ Open protocol
+ Expand
10

Antibody Sources for Tight Junction Research

Check if the same lab product or an alternative is used in the 5 most similar protocols
The antibodies used in this study were obtained from the following sources: Rabbit anti-ZO-1 (#D7D12) and anti-VE-cadherin (#D87F2) from Cell Signaling Technology (Danvers, MA, USA); Rabbit anti-GLUT-1 (#ab15309) and anti-SGLT-1 (#ab14686) from Abcam (Cambridge, MA, USA); Rabbit anti-GLUT-4 (#sc-7938) from Santa Cruz Biotechnology (Santa Cruz, CA, USA); Donkey anti-rabbit (#NA934) and sheep anti-mouse (#NA931) HRP-linked antibodies from GE Healthcare (Piscataway, NJ, USA); Mouse anti-Claudin 5 (#35-2500), goat anti-mouse (#A11001) and anti-rabbit (#A21428) conjugated to Alexa Fluor® 488 and 555 from Invitrogen (Camarillo, CA, USA). Sterile culture ware was obtained from Fisher Scientific (Pittsburgh, PA, USA), while other reagents and chemicals were purchased from Sigma-Aldrich (St. Louis, MO, USA) or Bio-Rad laboratories (Hercules, CA, USA). Fluorescein isothiocyanate (FITC) and Rhodamine B isothiocyanate (RITC) dextrans were purchased from Sigma-Aldrich, while Cascade Blue®-dextran was obtained from Invitrogen (Eugene, OR, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!