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Microplate reader

Manufactured by Sumitomo Pharma
Sourced in Japan

A microplate reader is a laboratory instrument used to measure the absorbance, fluorescence, or luminescence of samples in a microplate format. It is designed to quantify various biomolecules, such as proteins, nucleic acids, or small molecules, by detecting and analyzing the optical signals generated from the samples. The microplate reader provides a versatile and efficient means of conducting high-throughput assays in a wide range of applications, including drug discovery, cell-based studies, and biochemical analyses.

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10 protocols using microplate reader

1

Quantification of Pyruvic Acid in Onions

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The pyruvic acid was measured using a microplate reader (DS Pharma Biomedical) based on the method described by Anthon and Barrett35 . Briefly, 600 mg fresh onion bulb tissue was crushed with 600 μL distilled water using a Mixer Mill MM 300 (QIAGEN) for 6 min at 30 Hz, and held for 10 min at room temperature. After centrifugation at 15000 rpm at 4 °C for 10 min, 20 μL of the supernatant was applied to a 96 well plate. Approximately 30 min after crushing, 43 μL of distilled water and 66 μL of 0.25 g/L DNPH in 1M HCl were added to the supernatant in the 96 well plate and the plate was rolled gently for 10 min at 37 °C. After 10 min, 66 μL of 1.5 M NaOH was added. The absorbance at 515 nm was measured by the microplate reader. Standards were prepared from a 40 mM sodium pyruvate solution, ranging in concentration from 0.04 to 6 mM.
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2

Soft Agar Colony Formation Assay

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The soft agar colony formation assay was performed using the CytoSelect 96-well cell transformation assay kit (Cell Biolabs, San Diego, CA, USA). Human cervical carcinoma cell line HeLa cells (JCRB Cell Bank, NIBIOHN, Osaka, Japan) were used as a positive control since they are known to form colonies in soft agar medium (Kusakawa et al.11 (link); Ke et al.12 (link); Seo et al.13 (link)). The cells were maintained in Eagle’s minimum essential medium (Sigma-Aldrich) supplemented with 10% FBS (Sigma-Aldrich) and 0.1 mM non-essential amino acids (Thermo Fisher Scientific). The primary human cardiomyocytes (HCM) (PromoCell, Heidelberg, Germany) were were maintained in Myocyte Growth Medium (PromoCell). HeLa cells (1%, 100 cells; 0.5%, 50 cells; 0.1%, 10 cells; and 0.01%, 1 cell) were spiked into 1.0 × 104 HCM and grown in soft agar for 10 or 20 days. The cells were lysed and absorbance was recorded on a microplate reader (DS Pharma Biomedical, Osaka, Japan) at a wavelength of 485/520 nm filter set. The experiment was performed in triplicate.
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3

Doxorubicin-Induced Cytotoxicity Assay

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A lactate dehydrogenase (LDH) release assay was performed using an LDH Cytotoxicity Detection Kit (Takara Bio, Shiga, Japan). Doxorubicin (Wako) at 0.1, 1, 2, 5, or 10 μM was added for 24 h. After adding Doxorubicin for 24 h, the supernatants were then collected, and a mixture of diaphorase/NAD+ was added to each well. After incubation in the dark room for 30 min at room temperature, the absorbance was recorded on a microplate reader (DS Pharma Biomedical, Osaka, Japan) at a wavelength of 490 nm with a reference wavelength of 600 nm. The experiments were performed in triplicate. The LDH release was determined as the percentage of LDH release compared with that of the vehicle control.
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4

Transwell Assay for NK Cell Chemotaxis

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NKCs were labeled with CAM (Dojindo, Kumamoto) as described above. After incubation with blocking antibodies against SDF-1α/CXCL12 (Abcam) and MCP-1/CCL2 (Abcam) for 90 min at room temperature, the iPSC-CM sheet culture supernatants were placed in the bottom wells of a Transwell migration plate (Costar Corning). CAM-labeled NKCs were added to the upper wells, and plates were incubated for 90 min 37 °C to allow the cells to migrate. The fluorescence intensity was recorded with a microplate reader (DS Pharma Biomedical) with an excitation wavelength of 490 nm and an emission wavelength 520 nm. Experiments were performed in triplicate. The migrated cells were quantified by measuring the fluorescence intensity of the bottom wells, and the chemotaxis of NKCs was calculated as the percentage of the fluorescence intensity compared with that of the control well, in which NKCs were added to the bottom wells.
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5

Osteosarcoma Cell Proliferation Assay

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Osteosarcoma cells were seeded in 96-well flat-bottom plates at 5 × 103 cells per well with 100 μl of culture medium (described above). The cells were cultured for 48 h, and then 10 μl of Cell Proliferation Reagent WST-1 (Roche) was added. After 120min, the absorbance of the culture medium at 450 nm was measured using a microplate reader (DS Pharma Biomedical, Osaka, Japan).
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6

NKC-mediated Cytotoxicity Assay on iPSC-CMs

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After splenocytes derived from C57BL/6 were obtained as described above, NKCs were isolated from splenocytes by magnetic-activated cell sorting using negative-selection kits (NK Cell Isolation Kit II, Miltenyi Biotec) and cultured using ALyS505NK-EX medium (Cell, Science & Technology Institute Inc.) with 1000 U/ml mouse IL-2 (BioLegend) for two weeks. iPSC-CMs were treated with 100 ng/ml IFN-γ (R&D Systems) for 48 h. LDH-release assays were performed using an LDH Cytotoxicity Detection Kit (Takara Bio). Cultured NKCs were washed and incubated with blocking antibodies against DNAM-1 (CD226) (Thermo Fisher Scientific) and NKG2D (BioLegend) for 90 min at room temperature. After washing, NKCs were cocultured with iPSC-CMs in a 96-well plate for 6 h. After incubation in the dark for 30 min at room temperature, the absorbance at 490 nm was recorded with a microplate reader (DS Pharma Biomedical), with a reference wavelength of 600 nm. The experiments were performed in triplicate. LDH release was determined as the percentage of LDH released compared with that of the 0.5% Triton X-treated control.
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7

Evaluating hiPS-CM Viability under Hypoxia

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A lactate dehydrogenase (LDH) release assay was performed using an LDH Cytotoxicity Detection Kit (Takara Bio, Shiga, Japan). In the laminin group, plates had been pretreated with laminin‐221 before hiPS‐CMs were seeded. hiPS‐CMs (5 × 104/96 wells) were cultured at 37°C for 1 day. The second day, the media were changed to fresh media, then incubated under hypoxia (5% O2, 37°C) for 3 days. The mixture of diaphorase/nicotinamide adenine dinucleotide was added to each well. After incubation in a dark room for 30 minutes at room temperature, the absorbance was recorded on a microplate reader (DS Pharma Biomedical, Osaka, Japan) at a wavelength of 490 nm with a reference wavelength of 600 nm. The LDH release was determined as the percentage of LDH release compared with control. As for the FAK inhibition experiment, hiPS‐CMs were cultured with FAK14 (0, 25, or 50 μmol/L, catalog No. 3414, Tocris) from the second day under hypoxia for 3 days. Then, cell viability was assessed by the procedure mentioned above.
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8

Quantifying Hypoxia-Induced Cytotoxicity in hiPSC-CMs

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The LDH release assay was performed using LDH Cytotoxicity Detection Kit (Takara Bio, Shiga, Japan). FN-G-coated and uncoated hiPSC-CMs (2.5 × 104 cells/well) were respectively seeded into 96-well plates and cultured at 37°C for 1 day. The next day, the media were changed, and the cells were incubated under hypoxia (5% O2, 37°C) for 3 days.
A mixture of diaphorase and NAD+ was added to each well. After incubation in a dark room for 30 min at room temperature (20–25°C), the absorbance was recorded on a microplate reader (DS Pharma Biomedical, Osaka, Japan) at 490 nm with a reference wavelength of 600 nm. The experiments were performed in triplicates. LDH release was determined as the percentage of LDH release compared with that of the control.
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9

Sandwich ELISA for Alliinase Quantification

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A sandwich enzyme-linked immunosorbent assay (ELISA) was used for determination of alliinase protein as described by Kamata et al.37 . An antibody against alliinase was raised in rats by Operon Biotechnologies (Tokyo, Japan) using a purified onion alliinase protein. Affinity-purified anti-alliinase antibody was used as the capture layer in a sandwich ELISA. For the detection antibody, the anti-alliinase antibody was biotinylated using Biotin Labeling Kit-NH2 according to the manufacturer’s protocol (Dojindo Mol). A microplate reader (DS Pharma Biomedical) was used for the detection. The quantification range of the ELISA was 0.3–4.8 μg/mL of purified garlic alliinase protein as the standard. Alliinase protein expression levels are presented as the ratio relative to the total protein quantified using a Protein Assay Kit (Bio-Rad) with bovine gammaglobulin (SIGM) as the standard.
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10

MCF-7 Cell Viability Assay

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MCF-7 cells (2.5 × 103/well) were seeded in 96-well plates and incubated for 24 h. Then, the cells were treated with different concentrations of antipsychotics and tamoxifen citrate. The medium was exchanged 48 h after seeding the cells. After treatment for 72 h, the cells were washed with PBS. Then, 100 μL 10% FBS-RPMI+ 10 μL WST-8 solution was added to each well and incubated for an additional 1 h at 37 °C with 5% CO2. Absorbance at 450 nm was measured with a microplate reader (DS Pharma Biomedical, Osaka, Japan). All assays were replicated three times.
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