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Pd 10 gel filtration column

Manufactured by GE Healthcare
Sourced in United States, United Kingdom

The PD-10 gel filtration column is a laboratory equipment used for size-exclusion chromatography. It is designed to separate molecules based on their size or molecular weight. The column contains a pre-packed, pre-equilibrated matrix that allows for the efficient separation and purification of biomolecules, such as proteins, peptides, and nucleic acids, from complex mixtures.

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26 protocols using pd 10 gel filtration column

1

Biotinylation of Recombinant Galectins

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Gal-3, Gal-4 and Gal-8 were prepared as outlined previously 46 (link). Briefly, purified recombinant galectins by affinity chromatography on lactosyl-sepharose and eluted with 100mM lactose in PBS plus 2-mercaptoethanol (2-ME). Prior to derivatization, 2-ME was removed from galectin samples using a PD-10 gel filtration column (GE Healthcare), followed by addition of lactose (100 mM final concentration) to help maintain galectin stability and reduce the likelihood of adduct formation at or near the carbohydrate recognition domain (CRD). All galectins were biotinylated by incubating 3–5 mg/mL of galectin with 2 mM EZ-linkTM Sulfo-NHS-LC-Biotin (Sulfosuccinimidyl-6-(biotinamido) hexanoate) (Pierce) for 2h at 4°C. Unconjugated EZ-linkTM Sulfo-NHS-LC-Biotin and free lactose was separated from derivatized protein using a PD-10 gel filtration column. Derivatized protein was re-purified on lactosyl-sepharose and eluted with 100mM lactose in PBS plus 2-mercaptoethanol (2-ME) in order to eliminate any inactive protein resulting from derivitization, followed by removal of 2-ME using a PD-10 gel filtration column (GE Healthcare) prior to glycan microarray or direct bacterial binding analysis.
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2

Insulin-FITC Conjugation Protocol

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Conjugation of FITC to insulin was done according to a method previously described in the literature [24] . 8 mg FITC was dissolved in 1 ml DMSO, yielding a final concentration of 2 mM. 250 µl of the FITC stock solution was added in 5 µl aliquots to 40 mg of an insulin solution (1.4 mM), dissolved in 5 ml carbonate buffer at pH 9. The reaction mixture was stirred for 2 h in the dark, before 250 µl of a 1 M NH4Cl solution was added to quench excess fluorescence. Excess dye was removed using a PD-10 gel filtration column (GE healthcare, UK). The F/P ratio (1.5) was determined from the absorbance of the peptide and FITC at 277 and 495 nm respectively [24] . The I-FITC conjugate was used in further studies to examine the distribution of insulin in MPs and to study the insulin release pattern from MPs.
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3

Purification and Characterization of Pink Flamindo

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For protein expression, Pink Flamindo or mCherry in the pRSET-A vector was transformed into Escherichia coli JM109 (DE3) cells, and the cells were cultured for 4 days at 20 °C and harvested by centrifugation. The harvested cells were suspended in phosphate-buffered saline (PBS) and lysed by three freeze-thaw cycles and sonication with 40 μg/mL lysozyme. After centrifugation, the supernatants containing the Pink Flamindo protein were collected and purified on an Ni-NTA agarose column (QIAGEN, KJ Venlo, Netherlands) followed by clean up through a PD-10 gel filtration column (GE Healthcare) to remove imidazole and elution in HEPES buffer (150 mM KCl and 50 mM HEPES-KOH [pH 7.4]). To generate pH titration curves, purified Pink Flamindo protein was diluted in HEPES buffer (100 mM HEPES-KOH [pH 5 to 9]). The absorption spectra of purified Pink Flamindo protein were measured using an UV spectrophotometer (UV-1800, Shimadzu, Kyoto, Japan), and the fluorescence spectra were measured using a fluorescence spectrophotometer (F-2500, Hitachi, Tokyo, Japan).
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4

Expression and Labeling of Fusion Proteins

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PTD-ODD-Luciferase (POL), ODD-Luciferase (OL) and PTD-ODDmutant-Luciferase (POmL) fusion proteins were expressed in BL21-CodonPlus cells (Stratagene, La Jolla, CA, USA) as GST-tagged fusion proteins. The GST-tagged proteins were prepared essentially as described previously18 (link) and purified with a GST-column and digested with precision protease (GE Healthcare, Waukesha, WI, USA) to remove GST-tag from the fusion protein. The final products were equilibrated in Mg/Ca-free PBS (pH = 7.4). The fusion proteins (20 nmol/mL) were mixed with Alexa Fluor 680 C-2 maleimide (60 nmol/60 μL) (Invitrogen, Carlsbad, CA, USA) at 4 °C for 12 h. POL-AF probes were purified with a PD-10 gel filtration column (GE Healthcare) and an Amicon-10 centrifugation column (Millipore, Milford, MA, USA). The purified POL-AF was finally resolved in PBS (pH 7.4). Fluorescence-labeling characterizations were confirmed by SDS-PAGE fluorescence imaging and the labeling rate was calculated by colorimetric method with dye dilution series. The labeling rate was >0.9.
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5

Radiolabeling Mouse Monoclonal Antibody ATN-291

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The mouse monoclonal antibody ATN-291 (1.5 mg in 290 µL PBS) was reacted with CHX-A”-DTPA-p-Bn-SCN (5 µL, 20 μmol/mL in DMSO, Macrocyclics) after pH adjustment to 9 with aq. sodium carbonate (50 µL, 100 mM). After 1 h of gentle agitation in a 37 °C water bath the solution was passed over a PD-10 gel filtration column (GE Life Sciences) in 100 mM pH 5 sodium acetate, and the large molecule fraction was collected in 1.5 mL of effluent. Efficacy of the conjugation was confirmed through test radiolabeling with 177Lu.
100 μL of the ATN-291 solution (protein concentration: 1 μg/μL) was added to a vial containing 500 μL of the radionuclide solutions (0.1 M HCl) and 150 μL 1 M ammonium acetate. The solutions were incubated at 37 °C for 90 min, and again for 60 min after addition of aq. EDTA (100 μL, 50 mM, pH 7) to scavenge unchelated radionuclides, and the radiolabeling efficiency was checked with Al-backed silica TLC plates run in 1:1 acetonitrile and 0.5 M sodium acetate (pH 5). The solutions were then loaded onto a fresh PD-10 column, prepped and eluted with HEPES buffered (10 mM, pH 7.4) isotonic saline. 1.5 mL of eluate, containing the radiolabeled antibodies, were collected for injection.
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6

Purification and Spectroscopy of Flamindo Proteins

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Extraction and purification of Flamindo/Flamindo2 protein and in vitro spectroscopy were performed as previously reported [20] (link). Briefly, a Flamindo/Flamindo2-containing pRSETB vector was introduced into Escherichia coli JM109 (DE3) cells and cells were cultured at 20°C for 4 days. After 4 days of culture, cells were harvested by centrifugation, lysed by three freeze-thaw cycles, and sonicated with lysozyme. After centrifugation of the lysate, His-tagged Flamindo/Flamindo2 protein was purified from supernatants using a Ni-NTA agarose column (Qiagen) followed by a PD-10 gel-filtration column (GE Healthcare). The purified protein was finally eluted in Hepes buffer (150 mM KCl and 50 mM Hepes-KOH [pH 7.4]). The concentration of purified Flamindo/Flamindo2 protein was measured by the Bradford protein assay using Bio-Rad Protein Assay (Bio-Rad). Bovine serum albumin was used as a standard. Absorption and fluorescence spectra of purified Flamindo/Flamindo2 protein were measured using a UV-670 UV-Vis spectrophotometer (Jasco) and F-2700 fluorescence spectrophotometer (Hitachi), respectively.
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7

Alexa Fluor 488 Labeling of Galectin-3

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Human galectins were prepared as outlined previously. The recombinant galectin-3 was purified by affinity chromatography on lactosyl-Sepharose, and the bound lectin was eluted with 100mM lactose in PBS and 14mM β-mercaptoethanol (β-ME). Prior to derivatization, β-ME was removed from the galectin-3 samples by passing through a PD-10 gel filtration column (GE Healthcare), followed by the addition of 100mM lactose to help maintain the stability of galectin-3 and reduce the likelihood of adduct formation at or near the carbohydrate recognition domain. Alexa Fluor 488-labeled galectin-3 was prepared with either Alexa Fluor 488 C5-maleimide or Alexa Fluor 488 carboxylic acid succinimidyl ester dilithium salt-reactive dyes (Molecular Probes) according to manufacturer’s protocol.
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8

Heptapeptide Hapten Conjugation to KLH

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The heptapeptide was synthesized on solid phase using standard Fmoc main chain and Boc/Trt side chain protection chemistry. The VHCSAG peptide was treated with bromo-dimedone to generate the VHCDMDSAG modified peptide. KLH (Keyhole Limpet Hemocyanin) protein was activated by adding sulfo-SMCC (sulfosuccinimidyl 4-[N-maleimidomethyl]cyclohexane-1-carboxylated), a hetero-bifunctional crosslinker containing an amine-reactive N-hydroxysuccininmide and a sulfhydryl-reactive malemide group. The hapten was conjugated to succinylated KLH overnight at pH 8 and the product was then purified over a PD10 gel filtration column (GE Healthcare). Two New Zealand White (specific pathogen-free grade) rabbits were immunized subcutaneiously with conjugate in a 50:50 emulsification with adjuvant [either Freunds complete (FCA) or Freunds incomplete (FIA) according to the following schedule: day 0 boost (FCA), day 14 boost (FIA), and day 28 boost (FIA). The rabbits were bled on days 35 and 40 after the primary boost, the red blood cells spun out by centrifugation, and the remaining antisera was IgG purified using a Nab Protein A Plus Spin Kit (Thermo Scientific).
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9

Radioactive Labeling of C4BP and Protein H

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Purified proteins C4BP or Protein H (40 μg) were labeled with each 18.5 MBq (Hartmann Analytics) in the presence of 2 iodobeads (Pierce, Thermo Fisher) for 15 min according to the manufacturer's instruction. Free radioactivity was removed using a PD-10 gel filtration column (GE Healthcare) and eluted with 500 μl PBS. Fractions containing the majority of radioactivity (usually 3) were pooled and used for experiments. For storage at −20°C 500 μl glycerol was added. Specific activity was measured by analyzing 2 μl of the glycerol stock in a Wizard2 gamma counter (Perkin Elmer). 125I-C4BP had an average specific activity of about 30.000 cpm/μl, while 125I-Protein H had in average 75.000 cpm/μl.
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10

Reconstitution of CybB in Liposomes

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Reconstitution of CybB was performed as described earlier for other membrane proteins39 (link). Briefly, 20 µl 500 µM purified CybB was mixed with 250 µl sonicated liposomes (5 mg/ml) and 0.6% (w/v) sodium cholate and incubated for 30 min at RT. Detergent was removed by passing the suspension over a PD-10 gel filtration column (GE Healthcare). The final concentration of CybB in liposomes was 10 µM. Proteoliposomes were kept at 4 °C and used the same day for measurements.
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