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3 protocols using live dead stain zombie uv dye

1

Quantification of Immune Cell Populations

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Immune infiltration into adipose and liver tissues and splenic composition was quantified by flow cytometry as previously described13 (link),22 (link)–25 (link). Briefly, single cell suspensions from indicated tissues were obtained by enzymatic digestion. To determine cytokine production, total single cells were stimulated for 5 h with 50 ng/ml PMA (Sigma-Aldrich, St. Louis, MO) and 1 μg/ml Ionomycin (Calbiochem), in presence of brefeldin A (10 μg/mL, Sigma-Aldrich). Subsequently, flow cytometry was used to enumerate immune cell populations. Briefly, cells were incubated in PBS supplemented with 2% FBS and were stained with Live/Dead stain (Zombie UV Dye: Biolegend) and with directly conjugated monoclonal antibodies to CD3-AF700(145-2C11), TCRβ-BV711 (H57-597), CD8-PECʏ−7 (53-6.7), CD4-APC (RM4-5) (all antibodies from eBioscience) for 30 min. For intracellular staining, cells were fixed and permeabilized using eBioscience buffer and stained with FoxP3-PB (FJK-16s) and IL-10-PE (JES5-16E3). Flow cytometry data were collected using an LSR Fortessa (BD) flow cytometer and analyzed using FlowJo X software (vX0.7) and FACS Diva Software.
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2

Hepatic Immune Cell Profiling

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Single cell suspensions were derived from hepatic digestion as described and stained with directly conjugated monoclonal antibodies or isotype controls (all eBioscience) [3 (link), 17 (link)]. To determine IL-17A and IL-17F production, total single cells were stimulated for 5 h with 50 ng/ml PMA (Sigma-Aldrich, St. Louis, MO) and 1 μg/ml Ionomycin (Calbiochem), in presence of brefeldin A (10 μg/mL, Sigma-Aldrich). Subsequently, flow cytometry was used to enumerate immune cell populations as described [18 (link)–20 (link)]. Briefly, cells were treated with FACS fix buffer (BD Biosciences) for 15 minutes, washed and incubated in PBS supplemented with 2% FBS and were subsequently stained with Live/Dead stain (Zombie UV Dye: Biolegend) and with directly-conjugated monoclonal antibodies to CD45-AF700 (104), TCRβ-PE (H57-597), CD4-APCef780 (GK1.5), CD8-ef450 (53–6.7), CD11b-PE (M1/70), CD11c-Percp (N418), F4/80-APCef780 (BM8), Ly6C-Percp (HK1.4) Gr1-FITC (RB6-8C5), NK1.1-PECy7 (PK136), B220-ef450 (RA3-6B2), IL-17RA-APC (PAJ-17R), TNF-BV650 (MP6-XT22), IL-17A-Percp (17B7) and IL-17F-PE (18F10) [all antibodies from e-Bioscience] for 30 minutes. Flow cytometry data were then collected using a LSR Fortessa (BD) flow cytometer and analyzed using FlowJo X software (vX0.7).
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3

Metabolic Profiling of Th17 Cells

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For in vivo studies, obese mice were i.p. injected 2-NBDG (200 μg/mouse) (Molecular probes), after 20 minutes single cell suspensions were isolated from the liver and stained with Live/Dead stain (Zombie UV Dye: Biolegend) and with directly-conjugated monoclonal antibodies to CD45- PE-Dazzle594 (Biolegend, 104), CD3-AF700 (Biolegend, 17A2), CD4-APC-ef780 (e- Biosciences, GK1.5) and CXCR3-PE (Miltenyi, CXCR3–173) and analyzed by flow cytometry. For in vitro studies, 2-NBDG (100 μM/well) was added to the polarized ihTh17 and chTh17 cells in culture media, after 10 minutes at 37°C cells were washed, stained with Live/Dead stain and directly conjugated monoclonal antibodies and analyzed by flow cytometry.
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