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P-PERK is a lab equipment product designed to measure the phosphorylation of the PERK (Protein Kinase R-like Endoplasmic Reticulum Kinase) protein. PERK is a key regulator of the unfolded protein response, a cellular mechanism that responds to the accumulation of misfolded proteins in the endoplasmic reticulum. The P-PERK equipment provides a reliable and accurate method for quantifying the level of PERK phosphorylation, which is an important indicator of cellular stress and the activation of the unfolded protein response.

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38 protocols using p perk

1

Protein Expression Analysis in HL-60 Cells and Tumors

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Total protein was extracted from HL‐60 cells and mice tumours, and protein concentration was quantified by the Pierce BCA Protein Assay kit (Thermo Fisher Scientific, Inc.). The protein samples were separated by 7.5%‐12% SDS‐PAGE gels (Applygen, Beijing, China) and transferred onto polyvinylidene fluoride membranes (120 minutes at 100 V) using standard procedures. The membranes were blocked in TBST (PBS containing 0.1% Tween) containing 5% non‐fat dry milk for 120 minutes at room temperature and then incubated with primary antibodies against CRT (1:8000; Abcam), C/EBPα (1:500; Abcam), PERK (1:1000; Santa Cruz Biotechnology Inc, Santa Cruz, CA, USA), p‐PERK (1:1000; Santa Cruz Biotechnology Inc), AKT (1:8000; Abcam), p‐AKT (1:1000; Santa Cruz Biotechnology Inc), and GAPDH (1:1000; Santa Cruz Biotechnology Inc) overnight at 4°C. After washing with TBST, membranes were incubated with secondary antibody (1:3000; Anti‐rabbit IgG, HRP‐linked Antibody; Abcam) for 1 hour at room temperature. Membranes were then extensively washed and developed using an enhanced chemiluminescence detection system (CWC, Beijing, China).
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2

Antibodies and Reagents for ER Stress Study

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Primary antibodies targeting the following proteins were used in this study: p-eIF2α, IRE-1α, CHOP (Cell Signaling Technologies, Danvers, MA, USA), GRP78, ATF6α, PERK, p-PERK, sXBP-1, β-actin (Santa Cruz Biotechnologies, Santa Cruz, CA, USA), p-IRE-1α (Abcam, Cambridge, MA, USA) and monoclonal PDI (clone 1D3, Enzo Life Sciences, Farmingdale, NY, USA). Horseradish peroxidase-conjugated secondary antibodies were obtained from Santa Cruz Biotechnology. IC87114 was obtained from Calbiochem (San Diego, CA, USA). Ovalbumin, lipopolysaccharide, N-ethylmaleimide (NEM), 4-hydroxy-2-nonenal (4-HNE) and dihydroethidine (DHE) were purchased from Sigma-Aldrich (St Louis, MO, USA).
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3

Evaluating Cellular Stress Responses

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Propidium iodide (PI), N-acetyl-L-cysteine (NAC), DCFH-DA (6-carboxy-2,7-dichlorodihydrofluorescein diacetate), and PEITC were purchased from Sigma Aldrich (St. Louis, MO, USA) and MTT (3-[4,5-dimethylthiazol-2-yl]-2,5-­diphenyltetrazolium bromide) from Amresco (Solon, OH, USA). Fluorescein isothiocyanate (FITC)-labeled annexin V (Annexin V-FITC) kit was obtained from BD Biosciences Pharmingen (San Diego, CA, USA). Antibodies against ATF-6 and IRE1α were purchased from Cell Signaling Technology (CA), P-PERK, CHOP/GADD153, and poly-ADP ribose polymerase (PARP) from Santa Cruz Biotechnology (CA), BiP/GRP78 from BD Transduction LaboratoriesTM, and GAPDH from AbFrontier (Seoul, South Korea).
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4

Antibody-based Cellular Signaling Analysis

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Antibodies against tubulin (mouse polyclonal, 1:5000), actin (mouse polyclonal, 1:5000), PERK (bovine monoclonal, 1:500, sc-9481), p-PERK (rabbit polyclonal, 1:1000, sc-32577), cyclin D1 (mouse polyclonal, 1:500, sc-20044), and HPV E7 (rabbit polyclonal, 1:1000) were from Santa Cruz. Antibodies against Eif2a (rabbit polyclonal, 1:1000, 5324), p-Eif2a (rabbit polyclonal, 1:1000, 9721), Phospho-Akt (Thr308) (1:1000, 13038), Phospho-NF-κB p65 (Ser536) (1:1000, 3033), ATF4 (rabbit polyclonal, 1:1000, 11815), CHOP (rabbit polyclonal, 1:1000, 5554), cleaved-caspase 3 (rabbit polyclonal, 1:1000, 9661), and cleaved-PARP (rabbit polyclonal, 1:1000, 5625) were from Cell Signaling Technology. Anti-Ki67 (rabbit polyclonal, 1:2000, Ab15580) antibody were purchased from Abcam. Anti-LMP1 (mouse monoclonal, 1:200, M0897) antibody was from DAKO. Anti-Myc (rabbit polyclonal, 1:1000, PAB12716) antibody was from Abnova. Anti-FLAG (mouse monoclonal, M2, 1:1000, F3165) antibody was from Sigma-Aldrich. The PERK inhibitor (GSK2606414) was purchased from Selleck. Other chemicals, as well as Endoplasmic Reticulum isolation kit (ER0100) were purchased from Sigma-Aldrich.
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5

Immunohistochemical Evaluation of Kidney Injury

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Formalin-fixed kidneys were embedded in paraffin. Kidney sections were stained using the following antibodies: RTN1A, GRP78, CHOP, α-SMA, Collegen1 (Abcam, USA) and P-PERK (Santa Cruz, CA). The staining of glomerulus and tubulointerstitium was semi-quantitatively scored separately on a scale of 0–4 in a blinded manner by two independent researchers as previously described [21 (link)].
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6

Oxidative Stress and Signaling Pathways in Cell Model

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GP-17 (purity > 98%) was obtained from Shanghai Winherb Medical S&T Development (Shanghai, China). The cell culture materials, including fetal bovine serum, Dulbecco's modified Eagle's medium, and penicillin/streptomycin, were obtained from Gibco (NY, USA). The compounds used in Krebs-Henseleit (KH) buffer were purchased from Sigma-Aldrich Chemicals. The kits of malondialdehyde (MDA), catalase (CAT), lactate dehydrogenase (LDH), glutathione peroxidase (GSH-Px), and superoxide dismutase (SOD) were purchased from Jiancheng Bioengineering Institute (Nanjing, China). The primary antibodies, PI3K, P-PI3K, AKT, P-AKT, P38, P–P38, GRP78, P-PERK, PERK, P-eIf2α, eIf2α, ATF6, IRE1, P-JNK, JNK, CHOP, caspase-12, BAX, Bcl-2, BAD, and GAPDH were supplied by Santa Cruz Biotechnology (CA, USA).
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7

Palmitate-Induced Cellular Stress Mechanisms

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Palmitate was purchased from Calbiochem (San Diego, CA, USA). DCF-DA (2′,7′-dichlorofluorescin diacetate) was obtained from Molecular Probes (Eugene, OR, USA). Antibodies against β-actin, GRP78, CHOP, ATF6α, p-PERK, sXBP-1, p-JNK, Akt, Foxo1, GSK3β, IRS-1, IRS-2, HSP90, and CPR were acquired from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against p-AKT, p-Foxo-1, Foxo-1, p-AKT, p-GSK3β, p-Tyr, p-IR, and IR were acquired from Cell Signaling Technology (Beverly, MA, USA). Chlorozoxazone and p-nitrophenol were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA).
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8

Investigating Cellular Stress Responses

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ADMA was from Sigma-Aldrich (St. Louis, MO, USA). GRP78/BiP, IRE1 and cleaved caspase-3 antibodies were obtained from Cell Signaling Technology (Beverly, MA, USA). Bcl2, p-PERK, GAPDH and β-actin antibodies were purchased from Santa Cruz Biotechnology Inc. (Santa Cruz, CA, USA). SERCA2b and SERCA3 antibodies were purchased from Abcam Inc. (Cambridge, MA, USA). All other reagents, unless specially stated, were purchased from Sigma-Aldrich.
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9

Investigating Cellular Stress Mechanisms

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4-phenylbutiric acid (4-PBA) and dimethyl sulfoxide (DMSO) were purchased from Sigma Chemical Co. (St. Louis, MO). The kits for determining lactate dehydrogenase (LDH), total reactive oxygen species (ROS), malondialdehyde (MDA) contents, total creatine kinase (CK), superoxide dismutase (SOD) activity, and glutathione peroxidase (GSH-Px) were obtained from Jiancheng Bioengineering Institute (Nanjing, China). In Situ Cell Death Detection Kits (Fluorescein) were purchased from Roche (Basel, Switzerland). Primary antibodies against Grp78, p-PERK, PERK, CHOP, Caspase-12, JNK, p-JNK, Bax, Bcl-2, and β-actin were obtained from Santa Cruz Biotechnology (Santa Cruz, CA).
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10

Gastrodin Alleviates Diabetes-Induced Inflammation

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Gastrodin (Gas, its molecular weight is 286.28, CAS NO: 62499-27-8, purity>99%) was obtained from Shanghai Winherb Medical Science Company (Shanghai, China). Streptozotocin (STZ) was obtained from Sigma-Aldrich (St. Louis, MO, United States). The enzyme-linked immunosorbent assay (ELISA) kits for detecting the rat IL-1β and TNF-α were obtained from DAKEWEI (Shenzhen, China). The kits for determining MDA and SOD were obtained from Nanjing Jiancheng Institute (Nanjing, China). The kits for detecting triglyceride (TG), total cholesterol (TC), low density lipoprotein cholesterol (LDL-C) and high density lipoprotein cholesterol (HDL-C) were purchased from Biosino Biotechnology & Science Inc. (Beijing, China). Primary antibodies against NLRP3, BDNF, TXNIP, and GLUT3 were from Abcam (Cambridge, MA, United States). Primary antibodies against CHOP, PERK, P-PERK, ASC, Bax, and Bcl-2 were provided by Santa Cruz Biotechnology (Santa Cruz, CA, United States).
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