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4 protocols using mouse anti actin

1

Ovary Lysate Protein Analysis

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For ovary lysates, ovaries were dissected and placed immediately on dry ice. Cell and ovary lysates were extracted using radioimmunoprecipitation assay lysis buffer (Santa Cruz Biotechnology, Inc.) plus complete protease inhibitors (Roche). Protein was quantitated using the Bicinchoninic Acid Protein Assay (Thermo Fisher Scientific). Proteins were separated on a 4–12% NuPAGE Bis-Tris gel (Invitrogen) and transferred to polyvinylidene fluoride membranes. Membranes were blocked in milk or Odyssey blocking buffer and incubated in primary antibodies overnight at 4°C. Primary antibodies included rabbit anti-Ref(2)P (1:10,000), mouse anti-actin (1:500; JLA20; Developmental Studies Hybridoma Bank), mouse anti-Tubulin (1:1,000; E7), mouse anti–ATPsyn-α (1:1,000), mouse anti-Porin (1:1,000; MitoSciences), mouse anti-ANT (1:500; MitoSciences), rabbit anti–Dcp-1 (1:500; Laundrie et al., 2003 (link)), guinea pig anti–Dcp-1 (1:500; Tenev et al., 2005 (link)), rabbit anti-Pink1 (1:500; Abcam), and rabbit anti-Atg8a (1:1,000; Barth et al., 2011 (link)). Membranes were incubated with HRP-conjugated secondary antibodies or infrared-labeled secondary antibodies and were detected using the ECL Enhanced Western Blotting System (GE Healthcare) or the Odyssey System (LI-COR Biosciences). Densitometry was performed using ImageQuant 5.1 software (GE Healthcare).
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2

Immunoblotting of Drosophila Head Extracts

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For immunoblotting of heads extract, 40 heads of male flies were collected and frozen at indicated time. Heads were homogenized with T300 buffer, and protein samples were loaded onto acrylamide gels. Proteins were transferred on nitrocellulose membranes (GE health), and the membranes incubated with rat anti-TANGO10 (Fig. 1 and SI Appendix, Fig. S4), mouse anti-TANGO10 (SI Appendix, Fig. S5), mouse anti-synapsin (Developmental Studies Hybridoma Bank 3C11), rat anti-GE-1 (73 (link)), mouse anti-CUL3 (BD Biosciences 611848), mouse anti-V5 (ThermoFisher), rat anti-HA (Sigma Aldrich), rabbit anti-PER (74 (link)), guinea pig anti-TIM (10 (link)), mouse anti-actin (Developmental Studies Hybridoma Bank, JLA20), and anti-FLAG (Sigma-Aldrich) antibodies. The blots were detected using enhanced chemiluminescence prime (GE Healthcare). Quantifications were performed using Image J from two separate experiments (SI Appendix, Fig. S5).
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Drosophila Salivary Gland Protein Analysis

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Salivary glands were dissected from 13h after puparium formation control and hrmΔ1 animals. Salivary glands were homogenized in Laemmli buffer (Bio-Rad) and boiled for 5 min at 100oC. Salivary glands from hrm-2xFLAG animals were homogenized in 1x Laemmli buffer and incubated for 5min at 42oC. Proteins were separated on 4%–20% SDS polyacrylamide gels (Bio-Rad). Proteins were transferred to 0.45 mm nitrocellulose membrane (Bio-Rad) according to standard procedures. We used mouse anti-Broad Complex (1:500, Developmental Studies Hybridoma Bank), mouse anti-FLAG (1:1000, Sigma-Aldrich), rabbit anti-phospho-S6K (1:500, Cell Signaling Technologies) and mouse anti-actin (1:1000, Developmental Studies Hybridoma Bank) primary antibodies.
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4

Optimized Cell Lysis and Western Blotting

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For coomassie blue staining, 1 × 104 of cells were collected and lysed in 100 µl of lysis buffer. 10 µl of lysates were loaded. For western blots, 20 µg of total proteins were loaded. All primary antibodies were used at 1:500 dilution: rabbit anti-eEF2K (#3692, Cell Signaling Technology), rabbit anti-phospho-eEF2 (Thr56) (#2331, Cell Signaling Technology), rabbit anti-Cyclin D1 (#2922, Cell Signaling Technology), 4EBP1, p-dIF4E, rabbit anti-Tubulin (#2148, Cell Signaling Technology), rabbit anti-Collagen Type I Alpha 1 (COL1a1) (PAA350HU02, Cloud Clone Corp.), mouse anti-C-myc (9E10) (generously provided by Dr. Linda Penn), mouse anti-CDC2 (CDK1) (#9116, Cell Signaling Technology), and mouse anti-Actin (JLA20, Developmental Studies Hybridoma Bank) antibodies.
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