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L calc version 1

Manufactured by STEMCELL
Sourced in Canada

The L-Calc Version 1.1 is a laboratory device designed for determining the concentration of cells in a sample. It utilizes an automated counting method to provide accurate and reliable cell counts.

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13 protocols using l calc version 1

1

Evaluating ψ-Bufarenogin's Effects on Hepatoma Cells

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The proliferation and cell cycle transition of hepatoma cells treated with ψ-Bufarenogin were determined as previously described [33 (link)]. The apoptosis of hepatoma cells triggered by ψ-Bufarenogin was examined by Vybrant Apoptosis Kit (Molecular Probes, Eugene, OR) and flow cytometry. To perform an anchor-independent growth assay, hepatoma cells were plated at 1 × 104 cells per 60-mm dishes in DMEM containing 10% FBS and 30% (V/V) matrigel at the presence or absence of ψ-Bufarenogin. After 2 weeks, the multicellular colonies were counted under a microscope. For spheroid formation assay, primary hepatoma cells from patients were plated at 3 × 103/ml in Corning 3261 ultra-low attachment culture dishes followed by ψ-Bufarenogin treatment. One week later, the spheroids formed were counted under the microscope. For limiting dilution assay, hepatoma cells were seeded into 96-well ultra-low attachment culture plates for 7 days. Spheroid formation was assessed by visual inspection. Based on the frequency of wells without colony, the proportion of stem cells was determined by using Poisson distribution statistics and L-Calc Version 1.1 software (Stem Cell Technologies, Inc., Vancouver, Canada) [34 (link)].
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2

In vivo Limiting Dilution Assay

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In vivo LDA assay was performed as described previously (Yen et al., 2012 (link)). Tumor growth was assessed after 28 days. The frequency of tumor growth (take rate) observed at the various cell numbers allow the determination of TIC or CSC frequency using L-Calc version 1.1 software (STEMCELL Technologies). Differences in frequency between groups were analyzed by the likelihood ratio test.
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3

Sphere-Forming Assay for T-ICs

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Seeding of the indicated cells at various cell densities was made into 96-well ultra-low attachment culture plates and incubated for a period of 7 days. Using the LCalc version 1.1 software (Stem Cell Technologies, Inc., Vancouver, Canada) and Poisson distribution statistics, T-ICs were quantified on the basis of the frequency of wells with developing spheres
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4

Quantifying Cancer Stem Cell Proportions

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Various numbers of miR-96 mimic or miR-96 sponge and their control hepatoma cells (2, 4, 8, 16, 32 , 64 cells per well, n=16) were seeded into 96-well ultra-low attachment and cultured in DMEM/F12 (Gibco) supplemented with 1% FBS, 20 ng/mL bFGF and 20 ng/mL EGF for seven days. The CSC proportions were analyzed using Poisson distribution statistics and the L-Calc Version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada) as previously described (15) .
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5

CSC Proportion Analysis in GBC-SD and SGC-996 Cells

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Different numbers of GBC-SD or SGC-996 miR-552-3p sponge and their control cells were seeded into 96 well ultra-low adhesion plates and cultured in a 5% CO2 incubator for 7 days. CSC proportions were analyzed using Poisson distribution statistics and the L-Calc version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada) as described (25 (link)).
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6

Limiting Dilution Assay for Cancer Stem Cells

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For in vitro limiting dilution assays (LDAs), HCCLM3, or Huh7 cells were seeded into 96-well ultra-low attachment culture plates at serially diluted cell numbers and incubated for 7 days. CSC proportions were analyzed using Poisson distribution statistics and the L-Calc Version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada). For in vivo LDAs, HCCLM3 cells were serially diluted to the desired doses and then injected subcutaneously into NOD-SCID mice. The number of tumors was determined after 2 months, and the CSC proportion was analyzed using ELDA software (http://bioinf.wehi.edu.au/software/elda/index.html) provided by the Walter and Eliza Hall Institute.42 (link)
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7

Determining Cancer Stem Cell Proportions

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Various numbers of HCC cells (2, 4, 8, 16, 32, and 64 cells per well) were seeded into 96-well ultra-low attachment and cultured in DMEM/F12 (Gibco) supplemented with 1% FBS, 20 ng/ml bFGF and 20 ng/ml EGF for seven days. The CSC proportions were analyzed using Poisson distribution statistics and the L-Calc Version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada) as previously described (20 (link)).
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8

Stemness Quantification of Cancer Cell Lines

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Various numbers of SMMC7721 or HCCLM3 miR‐365 and their control cells (64, 32, 16, 8, 4, 2, cells per well) were seeded into 96‐well ultra‐low attachment culture plates for 7 days. CSC proportions were analyzed using Poisson distribution statistics and the L‐Calc Version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada) as described.22
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9

Quantification of Cancer Stem Cells

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Various numbers of miR-552 mimic or miR-552 sponge and their control hepatoma cells (2, 4, 8, 16, 32, and 64 cells per well) were seeded into 96-well ultra-low attachment and cultured in DMEM/F12 (Gibco), supplemented with 1% FBS, 20 ng/mL bFGF, and 20 ng/mL EGF for 7 days. The cancer stem cell (CSC) proportions were analyzed using Poisson distribution statistics and the L-Calc Version 1.1 software program (Stem Cell Technologies, Vancouver, Canada), as previously described.17 (link)
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10

Quantifying Cancer Stem Cell Proportions

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Various numbers of Huh7/HepG2 miR-361-3p mimic or miR-361-3p sponge and their control cells were digested and seeded into 96-well ultra-low attachment (2, 4, 8, 16, 32, 64 cells per well, n=8) and cultured in DMEM/F12 (Gibco) supplemented with 1% FBS, 20 ng/mL bFGF and 20 ng/mL EGF for seven days. The CSC proportions were analyzed using Poisson distribution statistics and the L-Calc Version 1.1 software program (Stem Cell Technologies, Inc., Vancouver, Canada) as previously described 20 (link).
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