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4 protocols using pictilisib

1

Clofarabine and Pictilisib Treatment Effects

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Clofarabine (S1218) was obtained from Selleck Chemicals (Houston, TX) and Pictilisib (HY-50094) was obtained from MedChemExpress (Monmouth Junction, NJ). AKT (4691), p-AKT (4060), checkpoint kinase 2 (CHK2) (6334), p-CHK2(2197), H2AX (7631), p-H2AX (9718), poly ADP-ribose polymerase (PARP) (9542), cleaved PARP (5625), ribosomal protein S6 kinase beta-1 (RPS6KB1) (9202), p-RPS6KB1 (9205), BCL2 (15071), BCL2-associated X (BAX) (5023), p53 upregulated modulator of apoptosis (PUMA) (98672), and cleaved caspase 3 (9661) antibodies were all obtained from Cell Signal Technology (Danvers, MA). Ki67 (27309) antibody was obtained from Proteintech (Rosemont, IL). β-Actin antibody was obtained from Millipore Sigma (St. Louis, MO).
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2

Mammary Epithelial Organoid Assay

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Epithelial cells were harvested from the mammary glands of 8 to 12-wk-old MIC mice and grown as organoids as described previously (28 (link)). Roughly 10,000 mammary epithelial cells were cultured in eight-well chambers in the organotypic medium consisted of Epicult-B mouse medium (Stem Cell Technologies, 05610), knockout serum replacement (Gibco, 10828010), penicillin/streptomycin, 10 ng/mL EGF, 25 μg/mL insulin (Sigma, 10156), and 1 μg/mL hydrocorticone for 6 d to allow formation of acinar structures. Subsequently, doxycycline was added to growth media either in the presence or absence of drug treatments for 8 d, with media changes every 48 h. The following inhibitors, along with their working doses, were used: GSK-126 (MedChem Express, Cat#HY-13470, 2 μM), EPZ6438 (MedChem Express, Cat#13803, 2 μM), Torin-1 (Selleckchem, Cat#S2827, 250 nM), Rapamycin (MedChem Express, Cat#HY-10219, 100 nM), IWP-2 (STEMCELL Technologies, Cat#721220, 20 nM), MS-177 (MedChem Express, Cat#HY-148333, 5 μM), A-395 (MedChem Express, Cat#HY-101512, 2.5 μM), 3-Deazaneplanocin A hydrochloride (DZNep) (MedChem Express, Cat#HY-10442, 2 μM), and Pictilisib (GDC-0941) (MedChem Express, Cat#HY-50094, 5 μM).
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3

Combinatorial Cancer Treatment Evaluation

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CUDC-907, rapamycin (mTOR inhibitor), and trichostatin A (HDAC inhibitor) were purchased from Selleck Chemicals (Houston, TX, USA). Pictilisib (PI3K-Akt inhibitor), carboplatin, paclitaxel, 3-methyladenine (3-MA, autophagy inhibitor), chloroquine (CQ, autophagy inhibitor), MHY1485 (mTOR activator), and SP600125 (JNK inhibitor) were purchased from MedChemExpress (Monmouth Junction, NJ, USA). N-acetyl-L-cysteine (NAC) was purchased from Sigma-Aldrich (St. Louis, MO, USA). CUDC-907 powder was dissolved at 10 M in pure dimethyl sulfoxide (DMSO) and stored at − 20 °C. Control cells were treated with DMSO as a vehicle.
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4

Evaluating Pharmacological Inhibitors

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NVP-2, Nutlin-3a, 5-fluorouridine, 5-fluorodeoxyuridine, THZ531 and Pictilisib were from MedChemExpress. 5-fluorouracil, Senexin A, OTS964 and Triptolide were from Selleck Chemicals. YLK-5–124 and THAL-SNS-032 were a gift from Nathanael S. Gray’s Laboratory (Stanford University, USA). iCDK9 was a gift from Qiang Zhou’s Laboratory (University of California, Berkley, USA). PP2A activator DT-061 was a gift from Jukka Westermarck’s Laboratory (University of Turku, Finland).
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