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5 protocols using igf 1

1

Enrichment and Culture of Erythroblasts

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LCLs were cultured in upright non-adherent T25 tissue culture flasks (Nunc) at 37 °C and 5% CO2. LCL media consisted of RPMI 1640 (Thermo Fisher, Waltham, MA, USA), supplemented with 1× GlutaMAX™ (Thermo Fisher), and 20% fetal bovine serum (Thermo Fisher). Erythroblasts were enriched in mixed PBL cultures following a previously published protocol [33 (link)]. Briefly, PBLs were cultured in erythroblast media containing StemSpan™ SFEM (Stem Cell Technologies, Vancouver, BC, Canada), 50 ng/mL recombinant human stem cell factor (R&D Systems, Minneapolis, MN, USA), 1 μM Dexamethasone (Sigma-Aldrich, St. Louis, MO, USA), 40 ng/mL IGF1 (Miltenyi Biotec, Bergisch Gladbach, Germany), 10 ng/mL Interleukin 3 (Miltenyi Biotech), 2 U/mL human erythropoietin (R&D Systems), and 10 μg/mL Gentamicin (Thermo Fisher). Magnetic beads labelled with a CD71 antibody were then used to enrich for erythroblasts, following the manufacturer’s instructions (Miltenyi Biotec).
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2

Isolation and Reprogramming of Heterozygous PBMCs to hiPSCs

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Peripheral blood mononuclear cells (PBMCs) were isolated from a known heterozygous parental carrier of the novel synonymous variant under investigation (Figure 1(k), individual I-2) using Ficoll density centrifugation, and maintenance in PBMC media: Stemspan H3000 (StemCell Technologies) supplemented with 50 ng/ml SCF, 40 ng/ml IGF-1 (Miltenyi), 10 ng/ml IL-3 (ThermoFisher), 2 U/ml EPO (R&D), 50 μg/ml ascorbic acid, and 1 μM dexamethasone (Sigma). Two million PBMCs were nucleofected with episomal reprogramming plasmids (Addgene 27080, 27078 and 27077), which expressed transcription factors L-MYC, LIN28, SOX2, KLF4, and OCT3/4, using the Amaxa-4D nucleofection system, Lonza P3 kit with 1 μg total plasmid amount. Transfected cells were seeded on Geltrex-coated plates containing Essential 8 (E8) medium (Life Technologies) and maintained daily until identifiable hiPSC colonies were observed (2-3 weeks). Suitable hiPSCs were then manually picked and transferred to Geltrex-coated plates for expansion in the E8 medium. The control hiPSC line was derived from normal skin fibroblasts (European Collection of Authenticated Cell Cultures (ECACC)) by the pluripotent stem cell core facility, StemCore (University of Queensland, Australian Institute for Bioengineering and Nanotechnology, Brisbane, Australia).
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3

Erythroblast Expansion from PBMCs

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Following the PBMC separation as described above, samples were cultured in media favoring expansion into erythroblasts as described by Yang et al. (2008) and Soares et al. (2015) with modifications. Briefly, 2 × 106 PBMCs (frozen or fresh) samples were cultured in a well of a 12-well culture plate in 2 ml of serum-free expansion media (EM) containing StemSpan H3000 (SS, StemCell Technologies), SCF (100 ng/ml, R&D Systems), IL-3 (10 ng/ml, Life Technologies), erythropoietin (3 U/ml; Miltenyi Biotech), IGF-1 (40 ng/ml; Miltenyi Biotech), and dexamethasone (1 μM; Sigma-Aldrich) for 9 days. Spent media were changed every 3 days. After that, cells were analyzed by flow cytometry to monitor erythroblast expansion using antibodies specific for erythroblast cell surface markers CD71 and CD36 and PBMC cell surface marker CD14 as described below.
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4

Isolation and Expansion of PBMNCs

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The isolation and expansion of PBMNCs has been previously reported [11 (link)]. ~5 ml of fresh blood was collected from the donor into an anticoagulant tube. The mononuclear cells were isolated by gradient centrifugation using Ficoll (Sigma-Aldrich, United States) and cultured in EM medium containing Stemspan 3000 (Invitrogen, United States), 50 μg/ml ascorbic acid (Sigma-Aldrich, United States), 50 ng/ml SCF (Miltenyi, Germany), 10 ng/ml IL-3 (Invitrogen, United States), 2 U/ml EPO (R&D Systems, United States), 40 ng/ml IGF-1 (Miltenyi, Germany), and 1 μm dexamethasone (Sigma-Aldrich, United States).
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5

Retinal Differentiation from Embryoid Bodies

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Three days after the initiation of forced aggregation, EBs were transferring to a 10 ml centrifuge tube and allowed to settle for 3 min. Spent retinal induction medium was aspirated and replaced with phase 2 (P2) retinal differentiation medium (Osakada et al. 2009 (link)) which consisted of DMEM/F12 (Invitrogen), supplemented with 10 ng Noggin/ml, 10 ng IGF-1/ml (Miltenyi Biotec), 10 ng dkk1/ml, 1% N2 supplement (Invitrogen), 5 ng/ml serum-free supplement for neural cell culture (B27) supplement (Invitrogen), 5 ng bFGF/ml, and 1% l-glutamine.
EBs were mixed and aspirated using wide tip plastic Pasteur pipettes (Starlabs) and 30–40 EBs were transferred to each well of ultra-low attachment 24-well culture plates (Corning). The well dimensions were: ht = 17.4 mm, top internal diam. = 16.3 mm and bottom internal diam. = 15.6 mm. Additional P2 medium was added to make 500 μl per well. No Matrigel was added. Culture plates were shaken with orbital diam. 10 mm set at 0.08 g at 37 °C for the remainder of the differentiation with ~90% medium changes every 2 days.
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