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Odyssey one color protein molecular weight marker

Manufactured by LI COR

The Odyssey One-Color Protein Molecular Weight Marker is a pre-stained protein marker designed for use with the Odyssey Imaging System. The marker provides a range of molecular weights for size estimation of proteins separated by SDS-PAGE and detected on the Odyssey System.

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2 protocols using odyssey one color protein molecular weight marker

1

Protein Extraction and Western Blot

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Protein was harvested using lysis buffer (10 mM Tris pH 7.5, 150 mM NaCl, 10 mM KCl, 0.5% deoxycholate, 0.5% Tween, 0.5% IGePawl, 0.1% SDS). Protein content was quantified using DC Protein Assay (BioRad; Hercules, CA, USA). 50–80 μg of protein were loaded into gel (Bis-Tris 4–12%, 1.5 mm) with 4x loading buffer (200 mM Tris pH 6.8, 40% glycerol, 8% SDS, 0.1% Bromophenol Blue), and 5% β-mercaptoethanol. Gel was run using MES running buffer (Tris Base 50 mM pH 7.3, MES 50 mM, SDS 0.1%, EDTA 1 mM). Novex Sharp Pre-Stained Protein Standard, SeeBlue Plus2 Pre-stained Protein Standard (Thermo Fisher), or Odyssey One-Color Protein Molecular Weight Marker (LI-COR) were used as molecular markers. Gel was transferred using Bis-Tris transfer buffer (25 mM bicine, 25 mM bis-tris, 1 mM EDTA, 10% methanol). Blots were blocked for 1 h in TBST (24.8 mM tris acid & base, 1.5 NaCl, 0.5% Tween 20) with 5% milk. Primary antibodies were used 1:1000 or 1:500 with HRP-conjugated chemiluminescent secondary antibodies 1:1000 in TBST with 5% BSA (primary) or milk (secondary). Blots were imaged using Clarity Max Western ECL Substrate (BioRad) using ChemDoc MP Imaging System (BioRad).
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2

Dystrophin Protein Extraction and Quantification

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Proteins were extracted from myotubes by replacing culture medium with NHC lysis buffer (4 M urea, 125 mM Tris pH 6.8 and 4% SDS) supplemented with 1X Complete Protease Inhibitor Cocktail Tablets (Roche). Samples were and left on ice for 10 min after which they were collected, boiled for 3 min and centrifuged at 14000×g for 10 min at 4 °C. Protein quantification was done with the Pierce BCA protein assay (Thermo Fisher Scientific). 50 μg of protein samples were run on a precast NuPAGE Novex Tris- Acetate 3–8% gradient gel (Invitrogen) according to manufacturer’s instructions. 10 μl of the HiMark pre-stained protein standard (Life Technology) and the Odyssey One-Color protein molecular weight marker (Licor) were included as a reference molecular weight to analyse the protein of interest. The gel was run on ice at 75 V for 45 min to allow dystrophin to slowly enter the gel and then at 150 V for 2 h and 15 min.
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