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75 protocols using nefa hr 2

1

Liver Lipid Extraction Protocol

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Liver lipids were extracted from snap-frozen liver samples (cohort 2) according to a modified protocol of Bligh and Dyer.26 (link) Briefly, liver samples (approx. 50 mg) were homogenized in CH3OH (10 μL/mg tissue). To 45 μL homogenate, 1800 μL CH3OH:CHCl3 (1:3 v.v−1) was added. The organic phase obtained after centrifugation (20,000 g; 15 min; room temperature) was dried with a gentle flow of gas N2 and dissolved in 100 μL 2% Triton X-100 in CHCl3. After the second drying step, obtained samples were dissolved in 100 μL H2O for measurements. TGs and TC were measured as described above, and free FAs (NEFA-HR (2), Fujifilm) and protein (23225, Thermo Fisher Scientific) were measured using commercially available kits. Lipid contents were expressed as μmol/mg protein.
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2

Comprehensive Metabolic Profiling Protocol

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The serum glucose (Glucose GOD-POD, ref 981,780, Thermo Fisher Scientific, Dardilly, France), uric acid (Uric Acid AOX, ref 981,788, Thermo Fisher Scientific, Dardilly, France), triglyceride (ref 981,786, Thermo Fisher Scientific, Dardilly, France), non-esterified fatty acid (NEFA-HR(2), FUJIFILM, Sobioda, Montbonnot Saint Martin) and hydroxybutyrate (RANBUT, RB 1007/MD, RANDOX, Roissy) concentrations; the serum total antioxidant status (TAS, NX2332, RANDOX, Roissy); the creatine kinase activity (CK-NAC, ref 92,307, BIOLABO, Abliance, Compiègne, France); and the liver glycolytic potential (Glucose HK, ref 981,779 and L-lactic acid, ref 984,308, Thermo Fisher Scientific, Dardilly, France) were measured spectrophotometrically using commercial kits.
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3

Quantifying Plasma Lipoprotein Lipase Activity

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This assay was performed following established methods as described previously [18 (link)]. Briefly, a blood sample was collected from the patient following an overnight fast and 10 min after the intravenous administration of heparin (60 IU/kg of body weight). Blood plasma was prepared by centrifugation at 400 g for 30 min. To assess LPL activity, we initially quantified plasma total lipase activity and hepatic lipase activity through an LPL-mediated lipolysis reaction. This was carried out using a free fatty acid (FFA) release assay kit [Wako kit# NEFA-HR(2), Japan], with TG-rich plasma obtained from Gpihbp11-deficient (Gpihbp11–/–) mice as the substrate for lipolysis. In the case of the plasma hepatic lipase activity assay, the sample was pretreated with 1 M NaCl and incubated for 60 min at 4 °C to inactivate the LPL. Subtracting hepatic lipase activity from total lipase activity provided a measure of plasma LPL activity. Both assays were conducted with three technical replicates. The reference value for normal LPL activity was derived from data obtained from 10 healthy volunteers at our center, consisting of 5 males and 5 females with an average age of 28.8 years.
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4

In Vitro Hepatocyte Assay Protocol

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We used glucose (catalog 8769), glycerol (catalog G2025-1L), poloxamer 407 (catalog 16758-250G), and dextran sulfate (catalog D8906-5G) from MilliporeSigma; Ensure Original Nutritional Shake from retail pharmacy; PHA-665752 (catalog 14703) from Cayman Chemical; mouse recombinant active HGF protein (catalog 2207-HG) from R&D Systems, Bio-Techne; mouse Ultra-Sensitive Insulin ELISA from Crystal Chem (catalog 90080); Triglyceride LiquiColor test (catalog 2200225) from StanBio Laboratories; total cholesterol (catalog 999-02601) and NEFA-HR(2) (Wako); and thrombin (catalog T4648-1KU) from MilliporeSigma.
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5

Plasma and Liver Metabolite Analysis

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Triglyceride, glycerol (TR0100, Sigma-Aldrich) and NEFA (NEFA-HR(2), Wako Chemicals GmbH) were measured in plasma and supernatant of liver explants and insulin concentration in plasma by ELISA (80-Insmsu-E01, ALPCO Diagnostics) following manufacturer's protocol.18 (link)
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Plasma and Liver Metabolite Analysis

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Triglyceride, glycerol (TR0100, Sigma-Aldrich) and NEFA (NEFA-HR(2), Wako Chemicals GmbH) were measured in plasma and supernatant of liver explants and insulin concentration in plasma by ELISA (80-Insmsu-E01, ALPCO Diagnostics) following manufacturer's protocol.18 (link)
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7

Comprehensive Metabolic Biomarker Panel

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Capillary blood glucose was measured using the glucose oxidase method (Dr. Müller Super GL, Freital, Germany). Triglycerides, cholesterol, LDL- and HDL-cholesterol, CRP, and liver enzymes were measured by standard laboratory methods using Cobas ISE direct and c111 Analyzer (Roche Diagnostics, Mannheim, Germany) [23 (link)]. Serum insulin was measured by fluoroimmunometric assay (AutoDelfia; Perkin Elmer, Rodgau, Germany) (inter-assay CV 2.3–3.5%, intra-assay CV 1.7–2.4%). Non-esterified fatty acids (FFA) were quantified in serum using a commercially available colorimetric assay (NEFA HR2, Wako, Neuss, Germany) performed on ABX Pentra 400 (HORIBA ABX, Montpellier, France) (inter-assay CV < 5%, intra-assay CV < 1%). Fetuin-B was assessed in serum samples by ELISA using a commercial ELISA kit (Human Fetuin B DuoSet ELISA; R&D Systems, Minneapolis, USA), following the manufacturer’s protocol (intra-assay CV: 5.3%, inter-assay CV: 8.2%). Plasma fetuin-A was also determined by an ELISA method (BioVendor Laboratory Medicine, Brno, Czech Republic (intra-assay CV: 3.6%, inter-assay CV: 4.5%)) in accordance with the manufacturer’s instructions.
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8

Lipase Activity Assay Protocol

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LPL activity was in principle measured through detecting free fatty acid (FFA) concentration [22 (link)]. The reaction substrate, termed buffer A, was composed of 1 ml TG-rich serum (TG concentration, > 3000 mg/dL) from Gpihbp1-deficient mice (Gpihbp1−/−) [23 (link)], 0.18 g 10% fatty acid-poor bovine serum albumin (BSA) (Miles, West Haven, CT), 0.031 mg heparin, 0.012 g NaCl and 0.3 mmol Tris-HCl Buffer (pH 8.5), in a final volume of 5 mL. 5 μL buffer A were mixed with 5 μL serum from wild-type rats and 5 μL test sample, and incubated at 37 °C for 60 min. [Note that serum from either Gpihbp1-deficient mice or wild-type rats was pre-incubated for 10 min at 62.5 °C in order to inactivate any residual endogenous lipase activity.] FFA concentration was determined in triplicate on a spectrophotometer (Thermo Multiskan GO) using the Wako kit, NEFA-HR(2).
In the case of human serum test sample, the FFA concentration represented the total post-heparin lipase activities that comprised LPL and hepatic lipase (HL) activities. To correct for the contribution from HL, 1 M NaCl was added and incubated for 60 min, so that the LPL activity can be completely inhibited [24 (link)]. LPL activity was then calculated by the difference between total post-heparin lipase activity and HL activity. All assays were performed in triplicate.
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9

Comprehensive Metabolic Profiling Protocol

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Fasting plasma glucose was measured using a hexokinase method on an autoanalyser (Roche Diagnostics Hitachi 917, Hitachi Ltd., Tokyo, Japan). Serum insulin concentration was determined by time-resolved fluoroimmunoassay using Insulin Kit (AUTOdelfia, Wallac, Turku, Finland). HbA1C was measured by high-pressure liquid chromatography using a fully automated Glycosylated Hemoglobin Analyzer System (BioRad, Richmond, CA). Plasma total and HDL cholesterol and triglyceride concentrations were measured with respective enzymatic kits from Roche Diagnostics using an autoanalyzer (Roche Diagnostics Hitachi 917, Hitachi Ltd., Tokyo, Japan). Serum FFA concentration was measured by an enzymatic colorimetric assay (NEFA-HR(2), Wako Chemicals GmbH, Neuss, Germany) using a Konelab 60i analyzer (Thermo Electron Corporation, Vantaa, Finland). Plasma ALT, AST, GGT and creatinine concentrations were determined as recommended by the European Committee for Clinical Laboratory Standards.
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10

Quantification of Metabolic Biomarkers in Mice

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Mouse plasma acylcarnitines were measured after derivatization to butylesters according to a standardized protocol (Violante et al. 2019 (link)). Tissue acylcarnitines were measured in freeze-dried tissue samples (approximately 50 mg of liver) after derivatization to propylesters essentially as described (van Vlies et al. 2005 (link); Ranea-Robles et al. 2020 (link)). Organic acids from mouse urine were analyzed by GC-MS as previously described (Ranea-Robles et al. 2021b (link)).
Plasma bile acids were analyzed by LC-negative ion electrospray MS/MS as previously described (Bootsma et al. 1999 (link); Ferdinandusse et al. 2005 (link)).
Total glycerol (i.e. free glycerol and triglycerides, TR22421, Thermo Scientific), total cholesterol (TR13421, Thermo Scientific), non-esterified fatty acids (NEFA-HR(2), Wako), β-hydroxybutyrate (β-OHB, MAK-041, Sigma Aldrich), alanine aminotransferase (ALT, TR71121, Thermo Scientific) and aspartate aminotransferase (AST, TR70121, Thermo Scientific) plasma levels were measured using commercial kits following manufacturer instructions.
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